LOC100688724 (cytochrome c oxidase subunit NDUFA4-like) - Rat Genome Database

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Gene: LOC100688724 (cytochrome c oxidase subunit NDUFA4-like) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC100688724
Name: cytochrome c oxidase subunit NDUFA4-like
RGD ID: 12281230
Description: FOUND IN membrane (inferred); mitochondrial respiratory chain complex IV (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cytochrome c oxidase subunit NDUFA4 pseudogene
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13016,705,154 - 16,705,579 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3016,631,229 - 16,631,641 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03016,849,676 - 16,850,088 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.13016,771,998 - 16,772,410 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03016,889,860 - 16,890,272 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03016,996,505 - 16,996,917 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Variants

.
Variants in LOC100688724
7 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038442329   ⟹   XP_038298257
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03016,849,676 - 16,850,088 (-)NCBI
RefSeq Acc Id: XM_038461290   ⟹   XP_038317218
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3016,631,229 - 16,631,641 (-)NCBI
RefSeq Acc Id: XM_038516778   ⟹   XP_038372706
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13016,771,998 - 16,772,410 (-)NCBI
RefSeq Acc Id: XM_038580416   ⟹   XP_038436344
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03016,996,505 - 16,996,917 (-)NCBI
RefSeq Acc Id: XM_038644714   ⟹   XP_038500642
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03016,889,860 - 16,890,272 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038372706   ⟸   XM_038516778
RefSeq Acc Id: XP_038500642   ⟸   XM_038644714
RefSeq Acc Id: XP_038298257   ⟸   XM_038442329
- UniProtKB: A0A8C0L0J6 (UniProtKB/TrEMBL),   A0A8C0PQ70 (UniProtKB/TrEMBL),   A0A8I3PWS0 (UniProtKB/TrEMBL),   A0A8C0NUT8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038317218   ⟸   XM_038461290
- UniProtKB: A0A8C0L0J6 (UniProtKB/TrEMBL),   A0A8C0PQ70 (UniProtKB/TrEMBL),   A0A8I3PWS0 (UniProtKB/TrEMBL),   A0A8C0NUT8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038436344   ⟸   XM_038580416
- UniProtKB: A0A8C0L0J6 (UniProtKB/TrEMBL),   A0A8C0NUT8 (UniProtKB/TrEMBL),   A0A8C0PQ70 (UniProtKB/TrEMBL),   A0A8I3PWS0 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003134 UniProtKB/TrEMBL
  ENSCAFG00030019709 UniProtKB/TrEMBL
  ENSCAFG00030026184 UniProtKB/TrEMBL
  ENSCAFG00040021255 UniProtKB/TrEMBL
  ENSCAFG00845024711 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000005038.4 UniProtKB/TrEMBL
  ENSCAFT00030036198.1 UniProtKB/TrEMBL
  ENSCAFT00030048461.1 UniProtKB/TrEMBL
  ENSCAFT00040039435.1 UniProtKB/TrEMBL
  ENSCAFT00845043609 ENTREZGENE
  ENSCAFT00845043609.1 UniProtKB/TrEMBL
InterPro B12D UniProtKB/TrEMBL
NCBI Gene LOC100688724 ENTREZGENE
PANTHER CYTOCHROME C OXIDASE SUBUNIT NDUFA4 UniProtKB/TrEMBL
  PTHR14256 UniProtKB/TrEMBL
Pfam B12D UniProtKB/TrEMBL
UniProt A0A8C0L0J6 ENTREZGENE
  A0A8C0NUT8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PQ70 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PWS0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC100688724  cytochrome c oxidase subunit NDUFA4-like  LOC100688724  cytochrome c oxidase subunit NDUFA4 pseudogene  Symbol and/or name change 5135510 APPROVED