WASHC2C (WASH complex subunit 2C) - Rat Genome Database

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Gene: WASHC2C (WASH complex subunit 2C) Canis lupus familiaris
Analyze
Symbol: WASHC2C
Name: WASH complex subunit 2C
RGD ID: 12277749
Description: ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); negative regulation of barbed-end actin filament capping (ortholog); protein localization to endosome (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FAM21C; family with sequence similarity 21 member C; WASH complex subunit 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1281,867,680 - 1,923,273 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha282,102,128 - 2,157,458 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl282,045,102 - 2,100,937 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBIUMICH_Zoey_3.1
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202   PMID:37756605  


Genomics

Comparative Map Data
WASHC2C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1281,867,680 - 1,923,273 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha282,102,128 - 2,157,458 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl282,045,102 - 2,100,937 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBIUMICH_Zoey_3.1
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBIUU_Cfam_GSD_1.0
WASHC2C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381045,727,043 - 45,792,964 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1045,727,200 - 45,792,964 (+)EnsemblGRCh38hg38GRCh38
GRCh371046,222,491 - 46,288,412 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361045,542,673 - 45,608,418 (+)NCBINCBI36Build 36hg18NCBI36
Cytogenetic Map10q11.22NCBI
HuRef1042,755,362 - 42,775,516 (+)NCBIHuRef
HuRef1045,847,426 - 45,860,572 (+)NCBIHuRef
CHM1_11046,261,957 - 46,327,743 (+)NCBICHM1_1
T2T-CHM13v2.01046,608,030 - 46,674,012 (+)NCBIT2T-CHM13v2.0
Washc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396116,184,988 - 116,239,632 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6116,184,999 - 116,239,647 (+)EnsemblGRCm39 Ensembl
GRCm386116,208,019 - 116,262,672 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6116,208,038 - 116,262,686 (+)EnsemblGRCm38mm10GRCm38
MGSCv376116,158,051 - 116,212,689 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366116,173,676 - 116,228,284 (+)NCBIMGSCv36mm8
Celera6118,045,548 - 118,100,917 (+)NCBICelera
Cytogenetic Map6E3NCBI
cM Map653.76NCBI
Washc2c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84150,912,863 - 150,998,301 (+)NCBIGRCr8
mRatBN7.24149,267,851 - 149,325,850 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4149,267,924 - 149,325,851 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4155,495,499 - 155,554,456 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04151,279,525 - 151,338,490 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04149,902,432 - 149,961,392 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04148,139,512 - 148,197,363 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4148,139,528 - 148,197,365 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04214,084,957 - 214,143,364 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44152,343,630 - 152,402,303 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14152,588,470 - 152,647,144 (+)NCBI
Celera4138,152,353 - 138,210,571 (+)NCBICelera
Cytogenetic Map4q42NCBI
Washc2c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555462,718,758 - 2,764,277 (-)NCBIChiLan1.0ChiLan1.0
WASHC2C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2858,597,182 - 58,662,384 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11058,602,525 - 58,667,713 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01044,122,236 - 44,187,376 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
LOC100522401
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11490,582,399 - 90,640,494 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21498,625,012 - 98,683,320 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Washc2c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624966436,196 - 500,275 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in WASHC2C
587 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 16 6 6 12 10 5
Low 1 5 6 6 6 6 8 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014108830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038439802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038460695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038578076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00845043292   ⟹   ENSCAFP00845033929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl282,045,102 - 2,100,929 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845043759   ⟹   ENSCAFP00845034288
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl282,045,113 - 2,100,937 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845044057   ⟹   ENSCAFP00845034525
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl282,045,113 - 2,100,937 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845044351   ⟹   ENSCAFP00845034753
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl282,045,113 - 2,100,937 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845044648   ⟹   ENSCAFP00845034982
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl282,045,113 - 2,100,937 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845045064   ⟹   ENSCAFP00845035327
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl282,045,128 - 2,100,936 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845045244   ⟹   ENSCAFP00845035476
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl282,045,165 - 2,100,933 (+)Ensembl
RefSeq Acc Id: XM_038439789   ⟹   XP_038295717
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439790   ⟹   XP_038295718
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439791   ⟹   XP_038295719
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439792   ⟹   XP_038295720
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439793   ⟹   XP_038295721
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439794   ⟹   XP_038295722
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439795   ⟹   XP_038295723
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439796   ⟹   XP_038295724
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439797   ⟹   XP_038295725
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439798   ⟹   XP_038295726
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439799   ⟹   XP_038295727
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439800   ⟹   XP_038295728
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439801   ⟹   XP_038295729
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038439802   ⟹   XP_038295730
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0282,045,109 - 2,100,466 (+)NCBI
RefSeq Acc Id: XM_038460695   ⟹   XP_038316623
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha282,102,128 - 2,157,458 (+)NCBI
RefSeq Acc Id: XM_038514409   ⟹   XP_038370337
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514410   ⟹   XP_038370338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514411   ⟹   XP_038370339
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514412   ⟹   XP_038370340
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514413   ⟹   XP_038370341
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514414   ⟹   XP_038370342
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514415   ⟹   XP_038370343
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514416   ⟹   XP_038370344
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514417   ⟹   XP_038370345
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514418   ⟹   XP_038370346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514419   ⟹   XP_038370347
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514420   ⟹   XP_038370348
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514421   ⟹   XP_038370349
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038514422   ⟹   XP_038370350
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1281,842,120 - 1,897,688 (+)NCBI
RefSeq Acc Id: XM_038578063   ⟹   XP_038433991
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578064   ⟹   XP_038433992
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578065   ⟹   XP_038433993
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578066   ⟹   XP_038433994
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578067   ⟹   XP_038433995
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578068   ⟹   XP_038433996
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578069   ⟹   XP_038433997
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578070   ⟹   XP_038433998
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578071   ⟹   XP_038433999
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578072   ⟹   XP_038434000
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578073   ⟹   XP_038434001
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578074   ⟹   XP_038434002
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578075   ⟹   XP_038434003
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
RefSeq Acc Id: XM_038578076   ⟹   XP_038434004
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0282,011,188 - 2,067,235 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038295717 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295718 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295719 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295720 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295721 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295722 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295723 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295724 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295725 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295726 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295727 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295728 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295729 (Get FASTA)   NCBI Sequence Viewer  
  XP_038295730 (Get FASTA)   NCBI Sequence Viewer  
  XP_038316623 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370338 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370339 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370340 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370341 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370342 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370343 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370344 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370345 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370346 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370347 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370348 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370349 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370350 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433991 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433992 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433993 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433994 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433995 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433996 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433997 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433998 (Get FASTA)   NCBI Sequence Viewer  
  XP_038433999 (Get FASTA)   NCBI Sequence Viewer  
  XP_038434000 (Get FASTA)   NCBI Sequence Viewer  
  XP_038434001 (Get FASTA)   NCBI Sequence Viewer  
  XP_038434002 (Get FASTA)   NCBI Sequence Viewer  
  XP_038434003 (Get FASTA)   NCBI Sequence Viewer  
  XP_038434004 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000010215.6
  ENSCAFP00000037208.3
  ENSCAFP00000053147.2
  ENSCAFP00000060145.2
  ENSCAFP00000061519.2
  ENSCAFP00040041404.1
  ENSCAFP00040041434.1
  ENSCAFP00040041456.1
  ENSCAFP00040041523.1
  ENSCAFP00845033929.1
  ENSCAFP00845034288
  ENSCAFP00845034288.1
  ENSCAFP00845034525.1
  ENSCAFP00845034753.1
  ENSCAFP00845034982
  ENSCAFP00845034982.1
  ENSCAFP00845035327
  ENSCAFP00845035327.1
  ENSCAFP00845035476
  ENSCAFP00845035476.1
Reference Protein Sequences
RefSeq Acc Id: XP_038370337   ⟸   XM_038514409
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038370341   ⟸   XM_038514413
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038370346   ⟸   XM_038514418
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038370345   ⟸   XM_038514417
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038370347   ⟸   XM_038514419
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038370343   ⟸   XM_038514415
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038370340   ⟸   XM_038514412
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038370338   ⟸   XM_038514410
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038370344   ⟸   XM_038514416
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038370348   ⟸   XM_038514420
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038370349   ⟸   XM_038514421
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038370350   ⟸   XM_038514422
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038370342   ⟸   XM_038514414
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038370339   ⟸   XM_038514411
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038295717   ⟸   XM_038439789
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295721   ⟸   XM_038439793
- Peptide Label: isoform X5
- UniProtKB: A0A8P0SS55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295726   ⟸   XM_038439798
- Peptide Label: isoform X10
- UniProtKB: A0A8I3S997 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295725   ⟸   XM_038439797
- Peptide Label: isoform X9
- UniProtKB: A0A8I3S9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295727   ⟸   XM_038439799
- Peptide Label: isoform X11
- UniProtKB: A0A8I3S997 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295723   ⟸   XM_038439795
- Peptide Label: isoform X7
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295720   ⟸   XM_038439792
- Peptide Label: isoform X4
- UniProtKB: A0A8C0TRW0 (UniProtKB/TrEMBL),   A0A8I3PSP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295718   ⟸   XM_038439790
- Peptide Label: isoform X2
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295724   ⟸   XM_038439796
- Peptide Label: isoform X8
- UniProtKB: A0A8C0LM74 (UniProtKB/TrEMBL),   A0A8C0Z721 (UniProtKB/TrEMBL),   A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295728   ⟸   XM_038439800
- Peptide Label: isoform X12
- UniProtKB: A0A8C0R7M8 (UniProtKB/TrEMBL),   A0A8C0TXZ3 (UniProtKB/TrEMBL),   A0A8I3PV48 (UniProtKB/TrEMBL),   A0A8P0SS55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295729   ⟸   XM_038439801
- Peptide Label: isoform X13
- UniProtKB: A0A8C0TSM2 (UniProtKB/TrEMBL),   A0A8I3S9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295730   ⟸   XM_038439802
- Peptide Label: isoform X14
- UniProtKB: A0A8I3S997 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295722   ⟸   XM_038439794
- Peptide Label: isoform X6
- UniProtKB: A0A8C0TRW0 (UniProtKB/TrEMBL),   A0A8I3PSP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038295719   ⟸   XM_038439791
- Peptide Label: isoform X3
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038316623   ⟸   XM_038460695
- Peptide Label: isoform X15
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433991   ⟸   XM_038578063
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433995   ⟸   XM_038578067
- Peptide Label: isoform X5
- UniProtKB: A0A8P0SS55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038434000   ⟸   XM_038578072
- Peptide Label: isoform X10
- UniProtKB: A0A8I3S997 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433999   ⟸   XM_038578071
- Peptide Label: isoform X9
- UniProtKB: A0A8I3S9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038434001   ⟸   XM_038578073
- Peptide Label: isoform X11
- UniProtKB: A0A8I3S997 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433997   ⟸   XM_038578069
- Peptide Label: isoform X7
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433994   ⟸   XM_038578066
- Peptide Label: isoform X4
- UniProtKB: A0A8C0TRW0 (UniProtKB/TrEMBL),   A0A8I3PSP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433992   ⟸   XM_038578064
- Peptide Label: isoform X2
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433998   ⟸   XM_038578070
- Peptide Label: isoform X8
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038434002   ⟸   XM_038578074
- Peptide Label: isoform X12
- UniProtKB: A0A8P0SS55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038434003   ⟸   XM_038578075
- Peptide Label: isoform X13
- UniProtKB: A0A8I3S9I4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038434004   ⟸   XM_038578076
- Peptide Label: isoform X14
- UniProtKB: A0A8I3S997 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433996   ⟸   XM_038578068
- Peptide Label: isoform X6
- UniProtKB: A0A8C0TRW0 (UniProtKB/TrEMBL),   A0A8I3PSP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433993   ⟸   XM_038578065
- Peptide Label: isoform X3
- UniProtKB: A0A8P0SC72 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845034753   ⟸   ENSCAFT00845044351
RefSeq Acc Id: ENSCAFP00845034982   ⟸   ENSCAFT00845044648
RefSeq Acc Id: ENSCAFP00845034525   ⟸   ENSCAFT00845044057
RefSeq Acc Id: ENSCAFP00845033929   ⟸   ENSCAFT00845043292
RefSeq Acc Id: ENSCAFP00845035327   ⟸   ENSCAFT00845045064
RefSeq Acc Id: ENSCAFP00845034288   ⟸   ENSCAFT00845043759
RefSeq Acc Id: ENSCAFP00845035476   ⟸   ENSCAFT00845045244
Protein Domains
FAM21/CAPZIP


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000006847 UniProtKB/TrEMBL
  ENSCAFG00040024133 UniProtKB/TrEMBL
  ENSCAFG00845024083 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000011021.6 UniProtKB/TrEMBL
  ENSCAFT00000042777.4 UniProtKB/TrEMBL
  ENSCAFT00000068680.2 UniProtKB/TrEMBL
  ENSCAFT00000078202.2 UniProtKB/TrEMBL
  ENSCAFT00000089923.2 UniProtKB/TrEMBL
  ENSCAFT00040047432.1 UniProtKB/TrEMBL
  ENSCAFT00040047469.1 UniProtKB/TrEMBL
  ENSCAFT00040047495.1 UniProtKB/TrEMBL
  ENSCAFT00040047564.1 UniProtKB/TrEMBL
  ENSCAFT00845043292.1 UniProtKB/TrEMBL
  ENSCAFT00845043759 ENTREZGENE
  ENSCAFT00845043759.1 UniProtKB/TrEMBL
  ENSCAFT00845044057.1 UniProtKB/TrEMBL
  ENSCAFT00845044351.1 UniProtKB/TrEMBL
  ENSCAFT00845044648 ENTREZGENE
  ENSCAFT00845044648.1 UniProtKB/TrEMBL
  ENSCAFT00845045064 ENTREZGENE
  ENSCAFT00845045064.1 UniProtKB/TrEMBL
  ENSCAFT00845045244 ENTREZGENE
  ENSCAFT00845045244.1 UniProtKB/TrEMBL
InterPro FAM21/CAPZIP UniProtKB/TrEMBL
NCBI Gene WASHC2C ENTREZGENE
PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS UniProtKB/TrEMBL
  WASH COMPLEX SUBUNIT 2A-RELATED UniProtKB/TrEMBL
Pfam CAP-ZIP_m UniProtKB/TrEMBL
UniProt A0A8C0LM74 ENTREZGENE
  A0A8C0R7M8 ENTREZGENE
  A0A8C0TRW0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TSM2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TXZ3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Z721 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PLZ4_CANLF UniProtKB/TrEMBL
  A0A8I3PSP1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PV48 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S912_CANLF UniProtKB/TrEMBL
  A0A8I3S955_CANLF UniProtKB/TrEMBL
  A0A8I3S997 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S9I4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P2S8_CANLF UniProtKB/TrEMBL
  A0A8P0SC72 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SS55 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TC29_CANLF UniProtKB/TrEMBL
  A0A8P0TD92_CANLF UniProtKB/TrEMBL