YIPF5 (Yip1 domain family member 5)

Gene: YIPF5 (Yip1 domain family member 5) Canis lupus familiaris

Analyze

Symbol:

YIPF5

Name:

Yip1 domain family member 5

RGD ID:

12265640

Description:

INVOLVED IN Golgi organization (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); Microcephaly, Epilepsy, and Diabetes Syndrome 2 (ortholog); FOUND IN COPII-coated ER to Golgi transport vesicle (inferred); endoplasmic reticulum (inferred); endoplasmic reticulum exit site (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

protein YIPF5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	38,894,687 - 38,907,487 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	38,895,995 - 38,907,422 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	35,940,091 - 35,952,894 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	39,347,925 - 39,360,732 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	39,343,164 - 39,360,711 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	36,420,546 - 36,433,335 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	37,233,996 - 37,246,789 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	38,036,907 - 38,049,724 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Microcephaly, Epilepsy, and Diabetes Syndrome 2 (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

endoplasmic reticulum to Golgi vesicle-mediated transport (IEA)

Golgi organization (ISO)

insulin processing (IEA)

protein transport (IEA)

regulation of ER to Golgi vesicle-mediated transport (IEA,ISO)

vesicle fusion with Golgi apparatus (IEA)

vesicle-mediated transport (IEA)

Cellular Component

COPII-coated ER to Golgi transport vesicle (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum exit site (IEA)

endoplasmic reticulum membrane (IEA)

Golgi apparatus (IEA)

Golgi membrane (IEA)

intracellular membrane-bounded organelle (IEA)

membrane (IEA)

nuclear outer membrane-endoplasmic reticulum membrane network (IEA)

nucleoplasm (IEA)

trans-Golgi network (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

YIPF5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	38,894,687 - 38,907,487 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	38,895,995 - 38,907,422 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	35,940,091 - 35,952,894 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	39,347,925 - 39,360,732 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	39,343,164 - 39,360,711 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	36,420,546 - 36,433,335 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	37,233,996 - 37,246,789 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	38,036,907 - 38,049,724 (-)	NCBI		UU_Cfam_GSD_1.0

YIPF5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	144,158,162 - 144,170,659 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	144,158,162 - 144,170,714 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	143,537,726 - 143,550,223 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	143,517,919 - 143,530,387 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	139,619,111 - 139,631,663 (-)	NCBI		Celera
Cytogenetic Map	5	q31.3	NCBI
HuRef	5	138,685,376 - 138,697,926 (-)	NCBI		HuRef
CHM1_1	5	142,972,246 - 142,984,802 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	144,690,356 - 144,702,848 (-)	NCBI		T2T-CHM13v2.0

Yipf5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	40,337,918 - 40,352,452 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	40,336,949 - 40,352,482 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	40,204,865 - 40,219,399 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	40,203,896 - 40,219,429 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	40,364,519 - 40,379,053 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	40,330,839 - 40,345,373 (-)	NCBI		MGSCv36	mm8
Celera	18	41,557,547 - 41,572,081 (-)	NCBI		Celera
Cytogenetic Map	18	B3	NCBI
cM Map	18	21.28	NCBI

Yipf5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	32,374,913 - 32,388,046 (-)	NCBI		GRCr8
mRatBN7.2	18	32,123,814 - 32,136,947 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	32,123,842 - 32,157,642 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	32,227,984 - 32,241,117 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	32,971,005 - 32,984,151 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	32,323,247 - 32,336,380 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	33,401,103 - 33,436,885 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	33,401,106 - 33,434,775 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	33,075,375 - 33,111,270 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	33,249,184 - 33,262,317 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	33,285,709 - 33,320,338 (-)	NCBI
Celera	18	31,744,527 - 31,757,660 (-)	NCBI		Celera
Cytogenetic Map	18	p11	NCBI

Yipf5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	9,795,214 - 9,812,405 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	9,795,214 - 9,809,871 (+)	NCBI	ChiLan1.0	ChiLan1.0

YIPF5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	139,395,360 - 139,406,693 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	137,528,762 - 137,546,258 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	139,557,911 - 139,570,364 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	145,612,807 - 145,625,280 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	145,612,807 - 145,625,280 (-)	Ensembl	panpan1.1		panPan2

Yipf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	148,691,533 - 148,707,183 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936504	10,265,477 - 10,282,108 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936504	10,265,506 - 10,278,522 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

YIPF5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	145,651,989 - 145,668,557 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	145,655,005 - 145,668,632 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

YIPF5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	46,765,326 - 46,777,245 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	46,766,484 - 46,777,244 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	31,059,302 - 31,072,166 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Yipf5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624774	3,399,250 - 3,414,740 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624774	3,398,368 - 3,414,926 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in YIPF5
119 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5		22	6	6	6	6		12	8	10	6
Low		5						6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014108132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038469724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038594737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038658787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_535226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000010224 ⟹ ENSCAFP00000009484

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	38,895,995 - 38,907,422 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845034014 ⟹ ENSCAFP00845026618

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	39,343,164 - 39,360,711 (-)	Ensembl

RefSeq Acc Id:

XM_038469724 ⟹ XP_038325652

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	36,420,546 - 36,433,335 (-)	NCBI

RefSeq Acc Id:

XM_038530498 ⟹ XP_038386426

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	38,036,907 - 38,049,724 (-)	NCBI

RefSeq Acc Id:

XM_038594737 ⟹ XP_038450665

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	37,233,996 - 37,246,789 (-)	NCBI

RefSeq Acc Id:

XM_038658787 ⟹ XP_038514715

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	39,347,925 - 39,360,732 (-)	NCBI

RefSeq Acc Id:

XM_535226 ⟹ XP_535226

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	38,894,687 - 38,907,487 (-)	NCBI
Dog10K_Boxer_Tasha	2	35,940,091 - 35,952,894 (-)	NCBI

Sequence:

show sequence

AAGAGGCGCAAATCTGCCAACGCGCCTGCGCGAGCGGCGTGCCCCGGAAGCAGTTCTTTGGCCC
TGTGACACGTAGCAACGGAGTCAATTCAGAGTCTGAACTGGTGTTGGGGGGTTTCGGGGGGTCG
CAGGAGCTGCTGCCGCCGCTGCCGCGTTTGATCCTTTGCGATGGCAGGCTTTGAGAACTTAAAC
ACGGATTTCTACCAGACCAGTTACAGCATCGATGACCAGTCACAACAGTCCTATGATTACGGAG
GAAGTGGAGGACCCTATAGCAAACAGTATGCTGGCTATGACTACTCGCAGCAAGGCCGATTTGT
CCCTCCAGAGATGATGCAGCCACAACAGCCATACACCGGGCAGATTTTTCAGCCAACTCAGGCA
TACACTCCAACAACACCTCAGCCATTCTATGGAAACAATTTTGAAGATGAGCCACCCTTATTAG
AAGAATTAGGTATCAATTTTGACCACATCTGGCAAAAAACACTAACAGTGTTACATCCGTTAAA
AGTAGCAGATGGCAGCATCATGAATGAGACTGATTTGGCAGGACCAATGGTTTTTTGCCTTGCC
TTTGGAGCCACGTTGTTACTGGCTGGCAAAATCCAGTTTGGCTATGTATATGGGATCAGTGCAA
TTGGATGTCTAGGAATGTTTTGTTTACTAAATTTAATGAGTATGACAGGTGTTTCATTTGGGTG
TGTGGCAAGTGTCCTTGGATATTGTCTTCTTCCCATGATCCTACTTTCCAGCTTTGCAGTGATA
TTTTCTTTGCAAGGAATGGTAGGAATCATTCTCACTGCTGGAATCATTGGATGGTGTAGTTTTT
CTGCTTCCAAAATTTTTATTTCTGCATTAGCCATGGAAGGACAGCAACTTCTAGTAGCATATCC
TTGTGCTTTGTTATATGGAGTCTTTGCCCTAATTTCTGTTTTTTGAACTGAATTTATCTGGCAT
GTGGACATCATTGGGCCAAAAAGGACTTTGAACTCTTAAATTGGACCAGCAAACTGCTACAGTG
CAACTCTCATGCAGACCTAATATTTGATTATTGGAGCAATGGAAGTAAACATGTATCTTTTGTT
CATTTTTATAGAACTTTTGAATACTATGTTGGATTTATCTGCAGTATGACTAGCTTTAAGTGTT
TGTGCTTATACAAATAAGTGCTATTTCTCTCCTGTTCCTGCAGCCTTTAAAAAACAAATTTTTT
TCCTTGCAAATTATATTAAGATGTTTTTAATAGATTTTTATCAACTGTGGGAAACTAACCACAG
AGCTAATACTCTTTCTTAGAAACAACCCATAGTTAAGAAGACACAAGACTTACTGCAGAAATAT
TTTTCCAAGGGATTAAGAGAGAAAAATTGCCTATATTCTTGAGTTAGATGCACTTGAAGCAAAA
AAAGTGATCCCAAAGTAGAGTTTTATGAGTTTGCGCTTCAAAAATTTAACATTCCTTTAAATTA
TCTTAGGGAGTTTTTGCTAAGATTCAATGAGAGAAGCCCATAGTCTACTTTATTGTAGATAGGA
AATGTGCACACCTGTTGAGATTAGCATTAACTAACTAAACCATAGTGACCCAGACTGGCCACAT
TAATGTTCATAGTTGGGATTCCATATTTCCTAGGAAAAAGAAAATCACTAACCTTTTTTTGAGA
AAAATATTTAAAATGTCACAATTCAGTACTGCAGTTATCAATGTAAAATGCATTTGATGCTTAG
TAATTAAAATTTTCCCGATTTTATCTGCTGTCGAGTTGACTTTGCTGTTTTCGGTATTGCATTT
TCTTTAACAAGGTTCTGGTTTTAACTTGTATTCCTAATTTATCCTAAGCTTTAGGAACAGAAAT
CATTTAGTATGAAATCAGAAAAAAGGTCTTAAGTGGAAGGCAATTTACTTTGAGTTACAACATT
ATTTCCTTGTATTAAACTTATTTGGCTAATATCGTGCTATCTTGCCAGAGAATCTCTAGGAAAA
TGCTGCATCTTGTATTTTGATCATTGGGTTTTTCTGAAAAAACAACTCTGATTTTGGATGAGTC
CAGTTATAGTTATGAGAAAGGTGCCCTGGGAGGAGGAAAATGTTGCCTTCTTTAGAAAAGGGGA
CTTTACACATTTCTTATAAGATCATAATTTCTAATCTCTGGAATCATGTAAATTTGCTTTTCTT
CATTAATACTTAATCTTCTGGAGGAATATTCTCACTAGCAGTTCATTTCTGGCTGGGTTTTCAA
CCTCACCAAAGTGTTTTAGAATATTTTTTATTGTAATCTATGGATAGTATCTTTTTTGCCTTTT
TCATTTCATTTTGTAAATACACAGTAACCCTGTTAAGGCAGATGTAATGAGTGCCTTCTGTTAA
TACCCAGTTTTTCCTAACAAATAGGGTCGATGATTCTTTGCGAAATAAATTTTCCCACTGTTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038325652	(Get FASTA)	NCBI Sequence Viewer
	XP_038386426	(Get FASTA)	NCBI Sequence Viewer
	XP_038450665	(Get FASTA)	NCBI Sequence Viewer
	XP_038514715	(Get FASTA)	NCBI Sequence Viewer
	XP_535226	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000071440.1
	ENSCAFP00030005297.1
	ENSCAFP00040011144.1
	ENSCAFP00845026618
	ENSCAFP00845026618.1

RefSeq Acc Id:

XP_535226 ⟸ XM_535226

- UniProtKB:

A0A8C0QHW2 (UniProtKB/TrEMBL), A0A8C0L0Z4 (UniProtKB/TrEMBL), A0A8I3P483 (UniProtKB/TrEMBL), A0A8C0R4C3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAGFENLNTDFYQTSYSIDDQSQQSYDYGGSGGPYSKQYAGYDYSQQGRFVPPEMMQPQQPYTG
QIFQPTQAYTPTTPQPFYGNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLA
GPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMI
LLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISV
F

hide sequence

RefSeq Acc Id:

ENSCAFP00000009484 ⟸ ENSCAFT00000010224

RefSeq Acc Id:

XP_038325652 ⟸ XM_038469724

RefSeq Acc Id:

XP_038450665 ⟸ XM_038594737

RefSeq Acc Id:	XP_038514715 ⟸ XM_038658787
- UniProtKB:	A0A8C0QHW2 (UniProtKB/TrEMBL), A0A8C0L0Z4 (UniProtKB/TrEMBL), A0A8I3P483 (UniProtKB/TrEMBL), A0A8C0R4C3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038386426 ⟸ XM_038530498
- UniProtKB:	A0A8C0L0Z4 (UniProtKB/TrEMBL), A0A8C0QHW2 (UniProtKB/TrEMBL), A0A8C0R4C3 (UniProtKB/TrEMBL), A0A8I3P483 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845026618 ⟸ ENSCAFT00845034014

Protein Domains

Yip1

Promoters

RGD ID:

13682460

Promoter ID:

EPDNEW_C529

Type:

initiation region

Name:

YIPF5_1

Description:

Yip1 domain family member 5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	38,907,436 - 38,907,496	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000006318	Ensembl
	ENSCAFG00000053034	UniProtKB/TrEMBL
	ENSCAFG00030003215	UniProtKB/TrEMBL
	ENSCAFG00040006928	UniProtKB/TrEMBL
	ENSCAFG00845019282	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000108487.1	UniProtKB/TrEMBL
	ENSCAFT00030005998.1	UniProtKB/TrEMBL
	ENSCAFT00040012875.1	UniProtKB/TrEMBL
	ENSCAFT00845034014	ENTREZGENE
	ENSCAFT00845034014.1	UniProtKB/TrEMBL
InterPro	Yip1/4-like	UniProtKB/TrEMBL
	Yip1_dom	UniProtKB/TrEMBL
KEGG Report	cfa:478048	UniProtKB/TrEMBL
NCBI Gene	YIPF5	ENTREZGENE
PANTHER	PROTEIN YIPF5	UniProtKB/TrEMBL
	PTHR21236	UniProtKB/TrEMBL
Pfam	Yip1	UniProtKB/TrEMBL
UniProt	A0A8C0L0Z4	ENTREZGENE
	A0A8C0QHW2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R4C3	ENTREZGENE
	A0A8I3P483	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:48491	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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