P4HA1 (prolyl 4-hydroxylase subunit alpha 1)

Gene: P4HA1 (prolyl 4-hydroxylase subunit alpha 1) Canis lupus familiaris

Analyze

Symbol:

P4HA1

Name:

prolyl 4-hydroxylase subunit alpha 1

RGD ID:

12260663

Description:

ENCODES a protein that exhibits dioxygenase activity (inferred); identical protein binding (inferred); iron ion binding (inferred); INVOLVED IN collagen fibril organization (ortholog); FOUND IN procollagen-proline 4-dioxygenase complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide I; prolyl 4-hydroxylase subunit alpha-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	23,600,399 - 23,677,820 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	23,601,636 - 23,677,762 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	23,738,890 - 23,816,335 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	23,886,920 - 23,964,071 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	23,886,987 - 23,964,060 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	23,785,865 - 23,863,342 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	23,984,840 - 24,062,302 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	24,339,447 - 24,416,949 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

collagen fibril organization (ISO)

Cellular Component

endoplasmic reticulum (IEA)

endoplasmic reticulum lumen (IEA)

intracellular membrane-bounded organelle (IEA)

mitochondrion (IEA)

procollagen-proline 4-dioxygenase complex (ISO)

Molecular Function

dioxygenase activity (IEA)

identical protein binding (IEA)

iron ion binding (IEA)

L-ascorbic acid binding (IEA)

metal ion binding (IEA)

procollagen-proline 4-dioxygenase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

P4HA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	23,600,399 - 23,677,820 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	23,601,636 - 23,677,762 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	23,738,890 - 23,816,335 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	23,886,920 - 23,964,071 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	23,886,987 - 23,964,060 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	23,785,865 - 23,863,342 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	23,984,840 - 24,062,302 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	24,339,447 - 24,416,949 (-)	NCBI		UU_Cfam_GSD_1.0

P4HA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	73,007,217 - 73,096,866 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	73,007,217 - 73,096,974 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	74,766,975 - 74,856,624 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	74,436,981 - 74,526,630 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	74,436,987 - 74,526,614	NCBI
Celera	10	68,052,119 - 68,141,888 (-)	NCBI		Celera
Cytogenetic Map	10	q22.1	NCBI
HuRef	10	68,760,779 - 68,850,247 (-)	NCBI		HuRef
CHM1_1	10	75,048,716 - 75,138,475 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	73,878,593 - 73,968,258 (-)	NCBI		T2T-CHM13v2.0

P4ha1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	59,159,019 - 59,209,126 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	59,159,118 - 59,209,126 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	59,323,197 - 59,373,304 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	59,323,296 - 59,373,304 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	58,786,044 - 58,836,052 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	58,718,730 - 58,767,701 (+)	NCBI		MGSCv36	mm8
Celera	10	60,423,571 - 60,473,579 (+)	NCBI		Celera
Cytogenetic Map	10	B4	NCBI
cM Map	10	29.52	NCBI

P4ha1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	27,784,696 - 27,895,785 (+)	NCBI		GRCr8
mRatBN7.2	20	27,302,046 - 27,352,098 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	27,302,141 - 27,352,786 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	28,311,476 - 28,361,143 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	27,697,734 - 27,747,401 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	28,442,360 - 28,492,030 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	28,920,616 - 28,972,576 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	28,920,616 - 28,971,966 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	30,726,604 - 30,776,891 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	20	28,745,570 - 28,795,338 (+)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

P4ha1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	18,604,525 - 18,668,800 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	18,604,525 - 18,668,800 (+)	NCBI	ChiLan1.0	ChiLan1.0

P4HA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	85,183,074 - 85,250,236 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	85,188,541 - 85,277,170 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	69,554,722 - 69,643,765 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	72,017,493 - 72,106,083 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	72,017,500 - 72,106,083 (-)	Ensembl	panpan1.1		panPan2

P4ha1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	57,488,533 - 57,552,472 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	5,981,079 - 6,047,499 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	5,981,205 - 6,045,195 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

P4HA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	75,825,148 - 75,919,016 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	75,827,207 - 75,919,121 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	81,892,533 - 82,002,926 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

P4HA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	58,178,350 - 58,259,303 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	58,178,461 - 58,259,802 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	18,766,319 - 18,856,093 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

P4ha1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	6,705,322 - 6,802,312 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	6,707,429 - 6,802,333 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in P4HA1
762 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5		17	1	2	1	6		12		10	6
Low		5	5	5	4	5		6		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005619006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005619007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_845589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002625716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005324150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005357958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005392466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005425556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000023158 ⟹ ENSCAFP00000021502

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	23,601,636 - 23,677,762 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000023168 ⟹ ENSCAFP00000021512

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	23,601,636 - 23,677,762 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000086941 ⟹ ENSCAFP00000062714

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	23,601,636 - 23,677,762 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010723 ⟹ ENSCAFP00845008361

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	23,886,987 - 23,964,060 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010738 ⟹ ENSCAFP00845008375

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	23,887,592 - 23,963,986 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010749 ⟹ ENSCAFP00845008386

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	23,887,592 - 23,963,986 (-)	Ensembl

RefSeq Acc Id:

XM_005619006 ⟹ XP_005619063

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,600,399 - 23,677,779 (-)	NCBI
Dog10K_Boxer_Tasha	4	23,738,890 - 23,816,332 (-)	NCBI

Sequence:

show sequence

CGCCGCCAGCGGGCTGAGGGAAGGGCGCAGGTATCCGGCCCGAGAGCAGGCTACAGCGGACTGA
AGAGCGCGCCGCCCCCCCGTGCCCACTCCCAGGTAATAAGGAGTACTTAAAAGTCCATGGATGT
GATGGTGAAGGAGCAAGAACAGCGTGCTGTCAGGATATTTGGAAAAGAAAGGTGTGTGAACCTG
AAAAATTAAGTTTTCCAAGATGATGTGGTATATTTTAATTGTAGGGATTCTACTTCCCCAGTCT
TTTGCACATCCAGGCTTTTTTACTTCAATTGGTCAGATGACTGATTTGATCCATACTGAGAAAG
ATCTGGTGACTTCTCTGAAAGACTATATTAAGGCAGAAGAGGACAAATTAGAACAAATAAAAAA
ATGGGCAGAGAAGTTAGATCGACTAACCAGCACAGCAACAAAAGATCCAGAAGGATTTGTTGGG
CACCCTGTAAATGCATTCAAATTAATGAAACGTCTGAACACTGAATGGAGTGAGTTGGAGAATC
TGGTCCTTAAGGATATGTCAGATGGCTTTATCTCTAACCTAACCATTCAGAGACAGTATTTCCC
TAATGATGAAGATCAGGTTGGGGCAGCGAAAGCTCTGTTGCGACTACAGGACACCTACAATTTG
GATACAGACACCATCTCAAAGGGTAATCTCCCAGGAGTAAAACATAAATCTTTTCTAACAGTTG
AAGACTGTTTTGAGTTGGGCAAAGTGGCCTATACAGAAGCAGATTATTACCATACAGAACTGTG
GATGGAACAAGCACTAAGGCAGCTGGATGATGGCGAGGTCTCTACCATTGATAAAGTCTCTGTT
CTAGATTATTTGAGTTATGCGGTATACCAGCAGGGAGACCTGGATAAGGCACTTTTGCTCACAA
AGAAGCTTCTTGAACTTGATCCTGAACACCAGAGAGCTAATGGTAACTTAAAATATTTTGAATA
TATAATGGCTAAAGAAAAAGATGCTAACAAATCTGCTTCAGATGACCAATCTGATCAGAAAACC
ACACTGAAGAAAAAAGGGGCTGCTGTGGATTACCTGCCAGAGAGACAGAAGTACGAAATGCTGT
GCCGTGGGGAGGGTATCAAAATGACTCCCCGGAGACAGAAAAAACTCTTTTGTCGTTACCATGA
TGGAAACCGGAATCCGAAATTCATTCTGGCTCCAGCCAAACAGGAGGATGAGTGGGACAAGCCT
CGTATTATTCGCTTCCATGATATTATTTCTGATGCAGAAATTGAAATTGTCAAAGATCTAGCAA
AACCAAGGCTGAGCCGAGCTACAGTACATGACCCTGAGACTGGAAAATTGACCACAGCACAGTA
CAGAGTATCTAAGAGTGCTTGGCTCTCTGGCTATGAAAACCCTGTGGTGTCTCGAATTAATATG
AGAATACAAGATTTAACAGGACTGGATGTTTCCACAGCAGAGGAATTACAGGTAGCCAATTATG
GAGTTGGAGGACAGTATGAACCCCACTTTGATTTTGCACGGAAAGATGAACCAGATGCTTTCAA
AGAGCTGGGGACAGGAAACAGAATTGCTACATGGTTGTTTTATATGAGTGATGTGTCAGCAGGA
GGAGCCACTGTTTTTCCTGAAGTAGGAGCAAGTGTTTGGCCCAAAAAGGGTACAGCTGTTTTCT
GGTATAATCTGTTTGCCAGTGGAGAAGGAGATTATAGTACACGGCATGCAGCCTGTCCAGTGCT
GGTTGGAAACAAATGGGTATCCAATAAGTGGCTCCATGAACGTGGACAAGAGTTTCGAAGACCA
TGCACCTTATCAGAATTGGAATGACAAATAGGCTTCCCTTCTTCTCCTGTACTCTAATGTGTCT
GATATGCACATTTTCCAGTCTTAACTTTCCAGAGTTTACAATTGACTAACACTCCATGATTGAT
TTCAGTCATGAACCTCATCTGATGTTTCATCTGTGGACAATCACTAACTTTGTGGGGGTTTTTT
CTTTTAAAAGTAACACTAAATCACCATATTGTACATATAAACCTTTAAAGTTCAGTTGGTATCA
CAGAGGATAAAGCAAGGTAGACCTAAAAAGTGAGGAATTTTTACACTTTTATCTTAAAGAACTT
CTTGGATAAAGAAAACAGTTTAAGCATCTGATTATAGTATCTCACTATATCTCAGTAGGGAGTA
GCTAGAATGGGCCATCTGATTAAGGAACAGAAGCCTCACAGTATGTACCTAGGTATTAGGTTTA
CCTAGTCTTACTTTTCCGGATCTACCTGAAGACTAGGAATAAACTAGGCCTCTAATCAGGGTTC
CACTTGATGTTTGCCCCATATGCTATTCTGAGTTGATTGTGGTGAATTAAGTCTGTTTAAGTTA
AAATACTTTGATTAAAAAATTTTTAAATACAGATCCCTATATAACAGTGGGTCTTCTTAACTAA
AATGATCATTAGTCTCTTGCCCCCTTTTTTTAAATGATGAGTTTGTCCATAAAATTTACTGTTT
TTCTTAGTGCTAATACCTTGCCTCTTATTCCTGCTACAGCAGGTGGTGATATTGGCATTCTGAT
AAAATATTGTGCCTTAGGAGACTGGAAATTTTAAAATGTACAAGTCCTTTTAATGATGAGGGAA
TTGATAGAAATTTTCTAAAAAGCCAAAATGTTTTTTTCAATTCTGAAATGTGTTGTGACAACAA
TGACCTATTTATGATCTTAAATCTTTTTTTTAAAAATGTTTCTGTTTTCTGTGTGGTATTTTTC
ATATTTGAATGTGAATGCATGCTATAGTGACACAGATGATTCTATTGATGTTACTATTTTTTTT
TTTTTAATGCATAGGACTTAGGTTTATCCCCTTGGTATTCATTCACTCTAATGGCACACTCTTA
CAGTAGAAAATTTAGGCTCTCTGAACTTTCAGATATTTATTCAAAATAGGTTTCCTTCTAAAGG
AACTACAACTTTACTATGGTTATGGAGCTATTACAATAATGGTACTTAAGCTTTCTCTTTTTCA
AAAATATGGCGTAATATAAAGCTGTGACCCTAATGAAGTATACTAAGTTTATACAAGGGCTCTT
TATCTTTTATGCACTCTTAAAATATTTAATTTGGGTAAGAAAGTATTATTACTTTTACCAACTT
AAAAAAAAAAATCAGTGAAATTCCTTTCTCCCAAATACCCTTTGTTTCACCCAAACTATTTTGG
TAAAAAATATTGAAAATAAGCTTCAGTACTTTACTTAAATTTTGTGACCATAGAGGATTTAAAA
AAAAATCCTGTTAGAAGCAATGTAAATGTGAGGGGATAGAAATAAAATGGTGGTTCAGTGAATG
GAAACTAACCTTTATTACCTTACGTGTTATAGCAAGTAGAATAAAAATAATATATATTTCAGAA
GGAAA

hide sequence

RefSeq Acc Id:

XM_005619007 ⟹ XP_005619064

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,600,399 - 23,677,820 (-)	NCBI
Dog10K_Boxer_Tasha	4	23,738,890 - 23,816,333 (-)	NCBI

Sequence:

show sequence

GGTTATAAAAGGGCTAACTGGCTCCCTCTGCTGCCCAGTCGCGCCGCCAGCGGGCTGAGGGAAG
GGCGCAGGTATCCGGCCCGAGAGCAGGCTACAGCGGACTGAAGAGCGCGCCGCCCCCCCGTGCC
CACTCCCAGGTGTGTGAACCTGAAAAATTAAGTTTTCCAAGATGATGTGGTATATTTTAATTGT
AGGGATTCTACTTCCCCAGTCTTTTGCACATCCAGGCTTTTTTACTTCAATTGGTCAGATGACT
GATTTGATCCATACTGAGAAAGATCTGGTGACTTCTCTGAAAGACTATATTAAGGCAGAAGAGG
ACAAATTAGAACAAATAAAAAAATGGGCAGAGAAGTTAGATCGACTAACCAGCACAGCAACAAA
AGATCCAGAAGGATTTGTTGGGCACCCTGTAAATGCATTCAAATTAATGAAACGTCTGAACACT
GAATGGAGTGAGTTGGAGAATCTGGTCCTTAAGGATATGTCAGATGGCTTTATCTCTAACCTAA
CCATTCAGAGACAGTATTTCCCTAATGATGAAGATCAGGTTGGGGCAGCGAAAGCTCTGTTGCG
ACTACAGGACACCTACAATTTGGATACAGACACCATCTCAAAGGGTAATCTCCCAGGAGTAAAA
CATAAATCTTTTCTAACAGTTGAAGACTGTTTTGAGTTGGGCAAAGTGGCCTATACAGAAGCAG
ATTATTACCATACAGAACTGTGGATGGAACAAGCACTAAGGCAGCTGGATGATGGCGAGGTCTC
TACCATTGATAAAGTCTCTGTTCTAGATTATTTGAGTTATGCGGTATACCAGCAGGGAGACCTG
GATAAGGCACTTTTGCTCACAAAGAAGCTTCTTGAACTTGATCCTGAACACCAGAGAGCTAATG
GTAACTTAAAATATTTTGAATATATAATGGCTAAAGAAAAAGATGCTAACAAATCTGCTTCAGA
TGACCAATCTGATCAGAAAACCACACTGAAGAAAAAAGGGGCTGCTGTGGATTACCTGCCAGAG
AGACAGAAGTACGAAATGCTGTGCCGTGGGGAGGGTATCAAAATGACTCCCCGGAGACAGAAAA
AACTCTTTTGTCGTTACCATGATGGAAACCGGAATCCGAAATTCATTCTGGCTCCAGCCAAACA
GGAGGATGAGTGGGACAAGCCTCGTATTATTCGCTTCCATGATATTATTTCTGATGCAGAAATT
GAAATTGTCAAAGATCTAGCAAAACCAAGGCTGAGGCGAGCCACCATTTCAAACCCAATAACAG
GAGACTTGGAGACGGTACATTACAGAATTAGCAAAAGTGCTTGGCTCTCTGGCTATGAAAACCC
TGTGGTGTCTCGAATTAATATGAGAATACAAGATTTAACAGGACTGGATGTTTCCACAGCAGAG
GAATTACAGGTAGCCAATTATGGAGTTGGAGGACAGTATGAACCCCACTTTGATTTTGCACGGA
AAGATGAACCAGATGCTTTCAAAGAGCTGGGGACAGGAAACAGAATTGCTACATGGTTGTTTTA
TATGAGTGATGTGTCAGCAGGAGGAGCCACTGTTTTTCCTGAAGTAGGAGCAAGTGTTTGGCCC
AAAAAGGGTACAGCTGTTTTCTGGTATAATCTGTTTGCCAGTGGAGAAGGAGATTATAGTACAC
GGCATGCAGCCTGTCCAGTGCTGGTTGGAAACAAATGGGTATCCAATAAGTGGCTCCATGAACG
TGGACAAGAGTTTCGAAGACCATGCACCTTATCAGAATTGGAATGACAAATAGGCTTCCCTTCT
TCTCCTGTACTCTAATGTGTCTGATATGCACATTTTCCAGTCTTAACTTTCCAGAGTTTACAAT
TGACTAACACTCCATGATTGATTTCAGTCATGAACCTCATCTGATGTTTCATCTGTGGACAATC
ACTAACTTTGTGGGGGTTTTTTCTTTTAAAAGTAACACTAAATCACCATATTGTACATATAAAC
CTTTAAAGTTCAGTTGGTATCACAGAGGATAAAGCAAGGTAGACCTAAAAAGTGAGGAATTTTT
ACACTTTTATCTTAAAGAACTTCTTGGATAAAGAAAACAGTTTAAGCATCTGATTATAGTATCT
CACTATATCTCAGTAGGGAGTAGCTAGAATGGGCCATCTGATTAAGGAACAGAAGCCTCACAGT
ATGTACCTAGGTATTAGGTTTACCTAGTCTTACTTTTCCGGATCTACCTGAAGACTAGGAATAA
ACTAGGCCTCTAATCAGGGTTCCACTTGATGTTTGCCCCATATGCTATTCTGAGTTGATTGTGG
TGAATTAAGTCTGTTTAAGTTAAAATACTTTGATTAAAAAATTTTTAAATACAGATCCCTATAT
AACAGTGGGTCTTCTTAACTAAAATGATCATTAGTCTCTTGCCCCCTTTTTTTAAATGATGAGT
TTGTCCATAAAATTTACTGTTTTTCTTAGTGCTAATACCTTGCCTCTTATTCCTGCTACAGCAG
GTGGTGATATTGGCATTCTGATAAAATATTGTGCCTTAGGAGACTGGAAATTTTAAAATGTACA
AGTCCTTTTAATGATGAGGGAATTGATAGAAATTTTCTAAAAAGCCAAAATGTTTTTTTCAATT
CTGAAATGTGTTGTGACAACAATGACCTATTTATGATCTTAAATCTTTTTTTTAAAAATGTTTC
TGTTTTCTGTGTGGTATTTTTCATATTTGAATGTGAATGCATGCTATAGTGACACAGATGATTC
TATTGATGTTACTATTTTTTTTTTTTTAATGCATAGGACTTAGGTTTATCCCCTTGGTATTCAT
TCACTCTAATGGCACACTCTTACAGTAGAAAATTTAGGCTCTCTGAACTTTCAGATATTTATTC
AAAATAGGTTTCCTTCTAAAGGAACTACAACTTTACTATGGTTATGGAGCTATTACAATAATGG
TACTTAAGCTTTCTCTTTTTCAAAAATATGGCGTAATATAAAGCTGTGACCCTAATGAAGTATA
CTAAGTTTATACAAGGGCTCTTTATCTTTTATGCACTCTTAAAATATTTAATTTGGGTAAGAAA
GTATTATTACTTTTACCAACTTAAAAAAAAAAATCAGTGAAATTCCTTTCTCCCAAATACCCTT
TGTTTCACCCAAACTATTTTGGTAAAAAATATTGAAAATAAGCTTCAGTACTTTACTTAAATTT
TGTGACCATAGAGGATTTAAAAAAAAATCCTGTTAGAAGCAATGTAAATGTGAGGGGATAGAAA
TAAAATGGTGGTTCAGTGAATGGAAACTAACCTTTATTACCTTACGTGTTATAGCAAGTAGAAT
AAAAATAATATATATTTCAGAAGGAAA

hide sequence

RefSeq Acc Id:

XM_038473242 ⟹ XP_038329170

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	23,785,865 - 23,863,338 (-)	NCBI

RefSeq Acc Id:

XM_038473243 ⟹ XP_038329171

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	23,785,865 - 23,863,339 (-)	NCBI

RefSeq Acc Id:

XM_038473244 ⟹ XP_038329172

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	23,785,865 - 23,863,340 (-)	NCBI

RefSeq Acc Id:

XM_038534307 ⟹ XP_038390235

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	24,339,447 - 24,416,945 (-)	NCBI

RefSeq Acc Id:

XM_038534308 ⟹ XP_038390236

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	24,339,447 - 24,416,946 (-)	NCBI

RefSeq Acc Id:

XM_038534309 ⟹ XP_038390237

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	24,339,447 - 24,416,947 (-)	NCBI

RefSeq Acc Id:

XM_038598626 ⟹ XP_038454554

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	23,984,840 - 24,062,298 (-)	NCBI

RefSeq Acc Id:

XM_038598627 ⟹ XP_038454555

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	23,984,840 - 24,062,299 (-)	NCBI

RefSeq Acc Id:

XM_038598628 ⟹ XP_038454556

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	23,984,840 - 24,062,300 (-)	NCBI

RefSeq Acc Id:

XM_038662904 ⟹ XP_038518832

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	23,886,920 - 23,964,067 (-)	NCBI

RefSeq Acc Id:

XM_038662905 ⟹ XP_038518833

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	23,886,920 - 23,964,068 (-)	NCBI

RefSeq Acc Id:

XM_038662906 ⟹ XP_038518834

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	23,886,920 - 23,964,069 (-)	NCBI

RefSeq Acc Id:

XM_845589 ⟹ XP_850682

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,600,399 - 23,677,820 (-)	NCBI
Dog10K_Boxer_Tasha	4	23,738,890 - 23,816,331 (-)	NCBI

Sequence:

show sequence

GGTTATAAAAGGGCTAACTGGCTCCCTCTGCTGCCCAGTCGCGCCGCCAGCGGGCTGAGGGAAG
GGCGCAGGTATCCGGCCCGAGAGCAGGCTACAGCGGACTGAAGAGCGCGCCGCCCCCCCGTGCC
CACTCCCAGGTGTGTGAACCTGAAAAATTAAGTTTTCCAAGATGATGTGGTATATTTTAATTGT
AGGGATTCTACTTCCCCAGTCTTTTGCACATCCAGGCTTTTTTACTTCAATTGGTCAGATGACT
GATTTGATCCATACTGAGAAAGATCTGGTGACTTCTCTGAAAGACTATATTAAGGCAGAAGAGG
ACAAATTAGAACAAATAAAAAAATGGGCAGAGAAGTTAGATCGACTAACCAGCACAGCAACAAA
AGATCCAGAAGGATTTGTTGGGCACCCTGTAAATGCATTCAAATTAATGAAACGTCTGAACACT
GAATGGAGTGAGTTGGAGAATCTGGTCCTTAAGGATATGTCAGATGGCTTTATCTCTAACCTAA
CCATTCAGAGACAGTATTTCCCTAATGATGAAGATCAGGTTGGGGCAGCGAAAGCTCTGTTGCG
ACTACAGGACACCTACAATTTGGATACAGACACCATCTCAAAGGGTAATCTCCCAGGAGTAAAA
CATAAATCTTTTCTAACAGTTGAAGACTGTTTTGAGTTGGGCAAAGTGGCCTATACAGAAGCAG
ATTATTACCATACAGAACTGTGGATGGAACAAGCACTAAGGCAGCTGGATGATGGCGAGGTCTC
TACCATTGATAAAGTCTCTGTTCTAGATTATTTGAGTTATGCGGTATACCAGCAGGGAGACCTG
GATAAGGCACTTTTGCTCACAAAGAAGCTTCTTGAACTTGATCCTGAACACCAGAGAGCTAATG
GTAACTTAAAATATTTTGAATATATAATGGCTAAAGAAAAAGATGCTAACAAATCTGCTTCAGA
TGACCAATCTGATCAGAAAACCACACTGAAGAAAAAAGGGGCTGCTGTGGATTACCTGCCAGAG
AGACAGAAGTACGAAATGCTGTGCCGTGGGGAGGGTATCAAAATGACTCCCCGGAGACAGAAAA
AACTCTTTTGTCGTTACCATGATGGAAACCGGAATCCGAAATTCATTCTGGCTCCAGCCAAACA
GGAGGATGAGTGGGACAAGCCTCGTATTATTCGCTTCCATGATATTATTTCTGATGCAGAAATT
GAAATTGTCAAAGATCTAGCAAAACCAAGGCTGAGCCGAGCTACAGTACATGACCCTGAGACTG
GAAAATTGACCACAGCACAGTACAGAGTATCTAAGAGTGCTTGGCTCTCTGGCTATGAAAACCC
TGTGGTGTCTCGAATTAATATGAGAATACAAGATTTAACAGGACTGGATGTTTCCACAGCAGAG
GAATTACAGGTAGCCAATTATGGAGTTGGAGGACAGTATGAACCCCACTTTGATTTTGCACGGA
AAGATGAACCAGATGCTTTCAAAGAGCTGGGGACAGGAAACAGAATTGCTACATGGTTGTTTTA
TATGAGTGATGTGTCAGCAGGAGGAGCCACTGTTTTTCCTGAAGTAGGAGCAAGTGTTTGGCCC
AAAAAGGGTACAGCTGTTTTCTGGTATAATCTGTTTGCCAGTGGAGAAGGAGATTATAGTACAC
GGCATGCAGCCTGTCCAGTGCTGGTTGGAAACAAATGGGTATCCAATAAGTGGCTCCATGAACG
TGGACAAGAGTTTCGAAGACCATGCACCTTATCAGAATTGGAATGACAAATAGGCTTCCCTTCT
TCTCCTGTACTCTAATGTGTCTGATATGCACATTTTCCAGTCTTAACTTTCCAGAGTTTACAAT
TGACTAACACTCCATGATTGATTTCAGTCATGAACCTCATCTGATGTTTCATCTGTGGACAATC
ACTAACTTTGTGGGGGTTTTTTCTTTTAAAAGTAACACTAAATCACCATATTGTACATATAAAC
CTTTAAAGTTCAGTTGGTATCACAGAGGATAAAGCAAGGTAGACCTAAAAAGTGAGGAATTTTT
ACACTTTTATCTTAAAGAACTTCTTGGATAAAGAAAACAGTTTAAGCATCTGATTATAGTATCT
CACTATATCTCAGTAGGGAGTAGCTAGAATGGGCCATCTGATTAAGGAACAGAAGCCTCACAGT
ATGTACCTAGGTATTAGGTTTACCTAGTCTTACTTTTCCGGATCTACCTGAAGACTAGGAATAA
ACTAGGCCTCTAATCAGGGTTCCACTTGATGTTTGCCCCATATGCTATTCTGAGTTGATTGTGG
TGAATTAAGTCTGTTTAAGTTAAAATACTTTGATTAAAAAATTTTTAAATACAGATCCCTATAT
AACAGTGGGTCTTCTTAACTAAAATGATCATTAGTCTCTTGCCCCCTTTTTTTAAATGATGAGT
TTGTCCATAAAATTTACTGTTTTTCTTAGTGCTAATACCTTGCCTCTTATTCCTGCTACAGCAG
GTGGTGATATTGGCATTCTGATAAAATATTGTGCCTTAGGAGACTGGAAATTTTAAAATGTACA
AGTCCTTTTAATGATGAGGGAATTGATAGAAATTTTCTAAAAAGCCAAAATGTTTTTTTCAATT
CTGAAATGTGTTGTGACAACAATGACCTATTTATGATCTTAAATCTTTTTTTTAAAAATGTTTC
TGTTTTCTGTGTGGTATTTTTCATATTTGAATGTGAATGCATGCTATAGTGACACAGATGATTC
TATTGATGTTACTATTTTTTTTTTTTTAATGCATAGGACTTAGGTTTATCCCCTTGGTATTCAT
TCACTCTAATGGCACACTCTTACAGTAGAAAATTTAGGCTCTCTGAACTTTCAGATATTTATTC
AAAATAGGTTTCCTTCTAAAGGAACTACAACTTTACTATGGTTATGGAGCTATTACAATAATGG
TACTTAAGCTTTCTCTTTTTCAAAAATATGGCGTAATATAAAGCTGTGACCCTAATGAAGTATA
CTAAGTTTATACAAGGGCTCTTTATCTTTTATGCACTCTTAAAATATTTAATTTGGGTAAGAAA
GTATTATTACTTTTACCAACTTAAAAAAAAAAATCAGTGAAATTCCTTTCTCCCAAATACCCTT
TGTTTCACCCAAACTATTTTGGTAAAAAATATTGAAAATAAGCTTCAGTACTTTACTTAAATTT
TGTGACCATAGAGGATTTAAAAAAAAATCCTGTTAGAAGCAATGTAAATGTGAGGGGATAGAAA
TAAAATGGTGGTTCAGTGAATGGAAACTAACCTTTATTACCTTACGTGTTATAGCAAGTAGAAT
AAAAATAATATATATTTCAGAAGGAAA

hide sequence

RefSeq Acc Id:

XR_002625716

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,603,938 - 23,677,820 (-)	NCBI
Dog10K_Boxer_Tasha	4	23,742,430 - 23,816,335 (-)	NCBI

Sequence:

show sequence

GGTTATAAAAGGGCTAACTGGCTCCCTCTGCTGCCCAGTCGCGCCGCCAGCGGGCTGAGGGAAG
GGCGCAGGTATCCGGCCCGAGAGCAGGCTACAGCGGACTGAAGAGCGCGCCGCCCCCCCGTGCC
CACTCCCAGGTGTGTGAACCTGAAAAATTAAGTTTTCCAAGATGATGTGGTATATTTTAATTGT
AGGGATTCTACTTCCCCAGTCTTTTGCACATCCAGGCTTTTTTACTTCAATTGGTCAGATGACT
GATTTGATCCATACTGAGAAAGATCTGGTGACTTCTCTGAAAGACTATATTAAGGCAGAAGAGG
ACAAATTAGAACAAATAAAAAAATGGGCAGAGAAGTTAGATCGACTAACCAGCACAGCAACAAA
AGATCCAGAAGGATTTGTTGGGCACCCTGTAAATGCATTCAAATTAATGAAACGTCTGAACACT
GAATGGAGTGAGTTGGAGAATCTGGTCCTTAAGGATATGTCAGATGGCTTTATCTCTAACCTAA
CCATTCAGAGACAGTATTTCCCTAATGATGAAGATCAGGTTGGGGCAGCGAAAGCTCTGTTGCG
ACTACAGGACACCTACAATTTGGATACAGACACCATCTCAAAGGGTAATCTCCCAGGAGTAAAA
CATAAATCTTTTCTAACAGTTGAAGACTGTTTTGAGTTGGGCAAAGTGGCCTATACAGAAGCAG
ATTATTACCATACAGAACTGTGGATGGAACAAGCACTAAGGCAGCTGGATGATGGCGAGGTCTC
TACCATTGATAAAGTCTCTGTTCTAGATTATTTGAGTTATGCGGTATACCAGCAGGGAGACCTG
GATAAGGCACTTTTGCTCACAAAGAAGCTTCTTGAACTTGATCCTGAACACCAGAGAGCTAATG
GTAACTTAAAATATTTTGAATATATAATGGCTAAAGAAAAAGATGCTAACAAATCTGCTTCAGA
TGACCAATCTGATCAGAAAACCACACTGAAGAAAAAAGGGGCTGCTGTGGATTACCTGCCAGAG
AGACAGAAGTACGAAATGCTGTGCCGTGGGGAGGGTATCAAAATGACTCCCCGGAGACAGAAAA
AACTCTTTTGTCGTTACCATGATGGAAACCGGAATCCGAAATTCATTCTGGCTCCAGCCAAACA
GGAGGATGAGTGGGACAAGCCTCGTATTATTCGCTTCCATGATATTATTTCTGATGCAGAAATT
GAAATTGTCAAAGATCTAGCAAAACCAAGGCTGAGCCGAGCTACAGTACATGACCCTGAGACTG
GAAAATTGACCACAGCACAGTACAGAGTATCTAAGAGTGCTTGGCTCTCTGGCTATGAAAACCC
TGTGGTGTCTCGAATTAATATGAGAATACAAGATTTAACAGGACTGGATGTTTCCACAGCAGAG
GAATTACAGGTAGCCAATTATGGAGTTGGAGGACAGTATGAACCCCACTTTGATTTTGCACGGA
TTTAAATAGCCAGATGTGAATTCTCCAGCCAGATTAAAGTGCTGACTGTCCAAAAGAATGACAA
GCATAGTAGCAGTAAACATTTGAATGGATCATGAGTTCAAAGTAAATCTCAAGAAAGATGAACC
AGATGCTTTCAAAGAGCTGGGGACAGGAAACAGAATTGCTACATGGTTGTTTTATATGAGTGAT
GTGTCAGCAGGAGGAGCCACTGTTTTTCCTGAAGTAGGAGCAAGTGTTTGGCC

hide sequence

RefSeq Acc Id:

XR_005324150

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	23,789,404 - 23,863,342 (-)	NCBI

RefSeq Acc Id:

XR_005357958

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	24,342,989 - 24,416,949 (-)	NCBI

RefSeq Acc Id:

XR_005392466

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	23,988,380 - 24,062,302 (-)	NCBI

RefSeq Acc Id:

XR_005425556

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	23,890,462 - 23,964,071 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005619063	(Get FASTA)	NCBI Sequence Viewer
	XP_005619064	(Get FASTA)	NCBI Sequence Viewer
	XP_038329170	(Get FASTA)	NCBI Sequence Viewer
	XP_038329171	(Get FASTA)	NCBI Sequence Viewer
	XP_038329172	(Get FASTA)	NCBI Sequence Viewer
	XP_038390235	(Get FASTA)	NCBI Sequence Viewer
	XP_038390236	(Get FASTA)	NCBI Sequence Viewer
	XP_038390237	(Get FASTA)	NCBI Sequence Viewer
	XP_038454554	(Get FASTA)	NCBI Sequence Viewer
	XP_038454555	(Get FASTA)	NCBI Sequence Viewer
	XP_038454556	(Get FASTA)	NCBI Sequence Viewer
	XP_038518832	(Get FASTA)	NCBI Sequence Viewer
	XP_038518833	(Get FASTA)	NCBI Sequence Viewer
	XP_038518834	(Get FASTA)	NCBI Sequence Viewer
	XP_850682	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000021502.3
	ENSCAFP00000021512.3
	ENSCAFP00000062714.1
	ENSCAFP00030017512.1
	ENSCAFP00030017608.1
	ENSCAFP00030017666.1
	ENSCAFP00040001487.1
	ENSCAFP00040001525.1
	ENSCAFP00040001535.1
	ENSCAFP00845008361
	ENSCAFP00845008361.1
	ENSCAFP00845008375
	ENSCAFP00845008375.1
	ENSCAFP00845008386.1

RefSeq Acc Id:	XP_005619064 ⟸ XM_005619007
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0PSC4 (UniProtKB/TrEMBL), A0A8I3N1J1 (UniProtKB/TrEMBL), A0A8C0R7J4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMWYILIVGILLPQSFAHPGFFTSIGQMTDLIHTEKDLVTSLKDYIKAEEDKLEQIKKWAEKLD RLTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLVLKDMSDGFISNLTIQRQYFPNDEDQV GAAKALLRLQDTYNLDTDTISKGNLPGVKHKSFLTVEDCFELGKVAYTEADYYHTELWMEQALR QLDDGEVSTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIMAKEK DANKSASDDQSDQKTTLKKKGAAVDYLPERQKYEMLCRGEGIKMTPRRQKKLFCRYHDGNRNPK FILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSA WLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGN RIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWV SNKWLHERGQEFRRPCTLSELE hide sequence

RefSeq Acc Id:	XP_005619063 ⟸ XM_005619006
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PN19 (UniProtKB/TrEMBL), A0A8I3RT21 (UniProtKB/TrEMBL), A0A8C0MVU6 (UniProtKB/TrEMBL), A0A8I3RUH8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMWYILIVGILLPQSFAHPGFFTSIGQMTDLIHTEKDLVTSLKDYIKAEEDKLEQIKKWAEKLD RLTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLVLKDMSDGFISNLTIQRQYFPNDEDQV GAAKALLRLQDTYNLDTDTISKGNLPGVKHKSFLTVEDCFELGKVAYTEADYYHTELWMEQALR QLDDGEVSTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIMAKEK DANKSASDDQSDQKTTLKKKGAAVDYLPERQKYEMLCRGEGIKMTPRRQKKLFCRYHDGNRNPK FILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSA WLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGN RIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWV SNKWLHERGQEFRRPCTLSELE hide sequence

RefSeq Acc Id:	XP_850682 ⟸ XM_845589
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PN19 (UniProtKB/TrEMBL), A0A8I3RT21 (UniProtKB/TrEMBL), A0A8C0MVU6 (UniProtKB/TrEMBL), A0A8I3RUH8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMWYILIVGILLPQSFAHPGFFTSIGQMTDLIHTEKDLVTSLKDYIKAEEDKLEQIKKWAEKLD RLTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLVLKDMSDGFISNLTIQRQYFPNDEDQV GAAKALLRLQDTYNLDTDTISKGNLPGVKHKSFLTVEDCFELGKVAYTEADYYHTELWMEQALR QLDDGEVSTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIMAKEK DANKSASDDQSDQKTTLKKKGAAVDYLPERQKYEMLCRGEGIKMTPRRQKKLFCRYHDGNRNPK FILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSA WLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGN RIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWV SNKWLHERGQEFRRPCTLSELE hide sequence

RefSeq Acc Id:

ENSCAFP00000062714 ⟸ ENSCAFT00000086941

RefSeq Acc Id:

ENSCAFP00000021512 ⟸ ENSCAFT00000023168

RefSeq Acc Id:

ENSCAFP00000021502 ⟸ ENSCAFT00000023158

RefSeq Acc Id:	XP_038329172 ⟸ XM_038473244
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038329171 ⟸ XM_038473243
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038329170 ⟸ XM_038473242
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038454556 ⟸ XM_038598628
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038454555 ⟸ XM_038598627
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038454554 ⟸ XM_038598626
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038518834 ⟸ XM_038662906
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0PSC4 (UniProtKB/TrEMBL), A0A8I3N1J1 (UniProtKB/TrEMBL), A0A8C0R7J4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038518833 ⟸ XM_038662905
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PN19 (UniProtKB/TrEMBL), A0A8I3RT21 (UniProtKB/TrEMBL), A0A8C0MVU6 (UniProtKB/TrEMBL), A0A8I3RUH8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038518832 ⟸ XM_038662904
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PN19 (UniProtKB/TrEMBL), A0A8I3RT21 (UniProtKB/TrEMBL), A0A8C0MVU6 (UniProtKB/TrEMBL), A0A8I3RUH8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038390237 ⟸ XM_038534309
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0PSC4 (UniProtKB/TrEMBL), A0A8C0R7J4 (UniProtKB/TrEMBL), A0A8I3N1J1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038390236 ⟸ XM_038534308
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MVU6 (UniProtKB/TrEMBL), A0A8C0PN19 (UniProtKB/TrEMBL), A0A8I3RT21 (UniProtKB/TrEMBL), A0A8I3RUH8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038390235 ⟸ XM_038534307
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MVU6 (UniProtKB/TrEMBL), A0A8C0PN19 (UniProtKB/TrEMBL), A0A8I3RT21 (UniProtKB/TrEMBL), A0A8I3RUH8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845008361 ⟸ ENSCAFT00845010723

RefSeq Acc Id:

ENSCAFP00845008386 ⟸ ENSCAFT00845010749

RefSeq Acc Id:

ENSCAFP00845008375 ⟸ ENSCAFT00845010738

Protein Domains

Fe2OG dioxygenase

Promoters

RGD ID:

13682922

Promoter ID:

EPDNEW_C988

Type:

single initiation site

Name:

P4HA1_1

Description:

prolyl 4-hydroxylase subunit alpha 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,662,889 - 23,662,949	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000014573	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030010802	UniProtKB/TrEMBL
	ENSCAFG00040000954	UniProtKB/TrEMBL
	ENSCAFG00845006050	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000023158.6	UniProtKB/TrEMBL
	ENSCAFT00000023168.5	UniProtKB/TrEMBL
	ENSCAFT00000086941.2	UniProtKB/TrEMBL
	ENSCAFT00030020085.1	UniProtKB/TrEMBL
	ENSCAFT00030020194.1	UniProtKB/TrEMBL
	ENSCAFT00030020259.1	UniProtKB/TrEMBL
	ENSCAFT00040001760.1	UniProtKB/TrEMBL
	ENSCAFT00040001801.1	UniProtKB/TrEMBL
	ENSCAFT00040001810.1	UniProtKB/TrEMBL
	ENSCAFT00845010723	ENTREZGENE
	ENSCAFT00845010723.1	UniProtKB/TrEMBL
	ENSCAFT00845010738	ENTREZGENE
	ENSCAFT00845010738.1	UniProtKB/TrEMBL
	ENSCAFT00845010749.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
	6.10.140.1460	UniProtKB/TrEMBL
	q2cbj1_9rhob like domain	UniProtKB/TrEMBL
InterPro	Oxoglu/Fe-dep_dioxygenase	UniProtKB/TrEMBL
	P4HA-like	UniProtKB/TrEMBL
	Pro_4_hyd_alph	UniProtKB/TrEMBL
	Pro_4_hyd_alph_FE2OG_OXY	UniProtKB/TrEMBL
	Pro_4_hyd_alph_N	UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
	TPR_repeat	UniProtKB/TrEMBL
KEGG Report	cfa:479242	UniProtKB/TrEMBL
NCBI Gene	P4HA1	ENTREZGENE
PANTHER	PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1	UniProtKB/TrEMBL
	PTHR10869	UniProtKB/TrEMBL
Pfam	2OG-FeII_Oxy_3	UniProtKB/TrEMBL
	P4Ha_N	UniProtKB/TrEMBL
PROSITE	FE2OG_OXY	UniProtKB/TrEMBL
	TPR	UniProtKB/TrEMBL
SMART	P4Hc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/TrEMBL
UniProt	A0A8C0MVU6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0PN19	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0PSC4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R7J4	ENTREZGENE
	A0A8I3N1J1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RT21	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RUH8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:44222	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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