PISD (phosphatidylserine decarboxylase) - Rat Genome Database

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Gene: PISD (phosphatidylserine decarboxylase) Canis lupus familiaris
Analyze
Symbol: PISD
Name: phosphatidylserine decarboxylase
RGD ID: 12191366
Description: ENCODES a protein that exhibits carboxy-lyase activity (inferred); phosphatidylserine decarboxylase activity (inferred); INVOLVED IN lipid droplet formation (inferred); mitochondrial protein catabolic process (inferred); phosphatidylethanolamine biosynthetic process (inferred); PARTICIPATES IN forkhead class A signaling pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH Childhood Schizophrenia (ortholog); genetic disease (ortholog); Liberfarb Syndrome (ortholog); FOUND IN cytosol (inferred); Golgi apparatus (inferred); lipid droplet (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: phosphatidylserine decarboxylase proenzyme; phosphatidylserine decarboxylase proenzyme, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12624,502,354 - 24,545,968 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2624,503,291 - 24,545,916 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2624,370,927 - 24,414,594 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02624,886,898 - 24,930,910 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2624,886,898 - 24,930,868 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12624,588,248 - 24,632,221 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02624,850,091 - 24,894,046 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02624,912,293 - 24,955,856 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PISD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12624,502,354 - 24,545,968 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2624,503,291 - 24,545,916 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2624,370,927 - 24,414,594 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02624,886,898 - 24,930,910 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2624,886,898 - 24,930,868 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12624,588,248 - 24,632,221 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02624,850,091 - 24,894,046 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02624,912,293 - 24,955,856 (-)NCBIUU_Cfam_GSD_1.0
PISD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382231,618,491 - 31,662,564 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2231,618,491 - 31,662,221 (-)EnsemblGRCh38hg38GRCh38
GRCh372232,014,477 - 32,058,550 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362230,344,477 - 30,356,810 (-)NCBINCBI36Build 36hg18NCBI36
Build 342230,339,034 - 30,351,364NCBI
Celera2215,814,919 - 15,827,252 (-)NCBICelera
Cytogenetic Map22q12.2NCBI
HuRef2214,973,668 - 14,986,003 (-)NCBIHuRef
CHM1_12231,974,095 - 31,986,424 (-)NCBICHM1_1
T2T-CHM13v2.02232,082,496 - 32,126,559 (-)NCBIT2T-CHM13v2.0
Pisd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39532,893,645 - 32,943,008 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl532,893,645 - 32,942,990 (-)EnsemblGRCm39 Ensembl
GRCm38532,736,301 - 32,785,642 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl532,736,301 - 32,785,646 (-)EnsemblGRCm38mm10GRCm38
MGSCv37533,078,962 - 33,128,275 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36533,053,170 - 33,102,483 (-)NCBIMGSCv36mm8
Celera530,198,745 - 30,248,776 (-)NCBICelera
Cytogenetic Map5B1NCBI
cM Map517.33NCBI
Pisd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81482,166,401 - 82,215,479 (+)NCBIGRCr8
mRatBN7.21477,941,927 - 77,991,021 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1477,941,948 - 77,991,003 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1482,383,790 - 82,432,828 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01483,623,901 - 83,672,940 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01480,069,636 - 80,118,672 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01483,298,630 - 83,347,697 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1483,298,674 - 83,346,738 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01483,985,694 - 84,034,704 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41483,694,028 - 83,743,051 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1476,857,502 - 76,906,360 (+)NCBICelera
Cytogenetic Map14q21NCBI
Pisd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554555,744,816 - 5,789,534 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554555,744,816 - 5,789,408 (-)NCBIChiLan1.0ChiLan1.0
PISD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22341,568,344 - 41,612,743 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12244,268,836 - 44,313,230 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02212,638,418 - 12,682,733 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12230,495,546 - 30,539,521 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2230,495,546 - 30,539,389 (-)Ensemblpanpan1.1panPan2
Pisd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118117,388,363 - 117,510,060 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936755712,278 - 767,728 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936755665,416 - 767,597 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PISD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1448,303,458 - 48,312,393 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11448,303,459 - 48,341,820 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21451,417,522 - 51,446,644 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PISD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11914,500,156 - 14,544,893 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1914,501,215 - 14,545,037 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045111,563,939 - 111,609,697 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pisd
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247478,032,855 - 8,074,677 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247478,036,416 - 8,074,609 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PISD
527 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 3 1 16 2 6 12 8 10 6
Low 2 4 6 6 4 6 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005636476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022410235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022410236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022410237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022410238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022410240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038575726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038639921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000020994   ⟹   ENSCAFP00000019494
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2624,503,291 - 24,545,916 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000020997   ⟹   ENSCAFP00000019497
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2624,503,291 - 24,535,494 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000074173   ⟹   ENSCAFP00000054726
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2624,503,291 - 24,535,494 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000074424   ⟹   ENSCAFP00000053694
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2624,503,291 - 24,513,198 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845043949   ⟹   ENSCAFP00845034442
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2624,886,898 - 24,930,868 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845044023   ⟹   ENSCAFP00845034497
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2624,886,899 - 24,920,435 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845044119   ⟹   ENSCAFP00845034568
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2624,886,899 - 24,898,010 (-)Ensembl
RefSeq Acc Id: XM_005636476   ⟹   XP_005636533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,513,202 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,381,786 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005636477   ⟹   XP_005636534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,545,968 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,414,594 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005636479   ⟹   XP_005636536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,512,686 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,381,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022410235   ⟹   XP_022265943
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,509,514 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,378,032 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022410236   ⟹   XP_022265944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,535,494 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,404,128 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022410237   ⟹   XP_022265945
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,512,031 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,380,529 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022410238   ⟹   XP_022265946
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,531,561 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,400,176 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022410240   ⟹   XP_022265948
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,502,354 - 24,511,818 (-)NCBI
Dog10K_Boxer_Tasha2624,370,927 - 24,380,401 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038437319   ⟹   XP_038293247
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,894,349 (-)NCBI
RefSeq Acc Id: XM_038437320   ⟹   XP_038293248
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,898,103 (-)NCBI
RefSeq Acc Id: XM_038437321   ⟹   XP_038293249
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,930,910 (-)NCBI
RefSeq Acc Id: XM_038437322   ⟹   XP_038293250
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,920,435 (-)NCBI
RefSeq Acc Id: XM_038437323   ⟹   XP_038293251
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,896,846 (-)NCBI
RefSeq Acc Id: XM_038437324   ⟹   XP_038293252
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,916,479 (-)NCBI
RefSeq Acc Id: XM_038437325   ⟹   XP_038293253
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,897,552 (-)NCBI
RefSeq Acc Id: XM_038437326   ⟹   XP_038293254
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02624,886,898 - 24,896,718 (-)NCBI
RefSeq Acc Id: XM_038512215   ⟹   XP_038368143
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,595,633 (-)NCBI
RefSeq Acc Id: XM_038512216   ⟹   XP_038368144
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,599,387 (-)NCBI
RefSeq Acc Id: XM_038512217   ⟹   XP_038368145
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,632,221 (-)NCBI
RefSeq Acc Id: XM_038512218   ⟹   XP_038368146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,621,733 (-)NCBI
RefSeq Acc Id: XM_038512219   ⟹   XP_038368147
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,598,130 (-)NCBI
RefSeq Acc Id: XM_038512220   ⟹   XP_038368148
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,618,005 (-)NCBI
RefSeq Acc Id: XM_038512221   ⟹   XP_038368149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,598,836 (-)NCBI
RefSeq Acc Id: XM_038512222   ⟹   XP_038368150
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12624,588,248 - 24,598,002 (-)NCBI
RefSeq Acc Id: XM_038575718   ⟹   XP_038431646
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,919,298 (-)NCBI
RefSeq Acc Id: XM_038575719   ⟹   XP_038431647
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,923,052 (-)NCBI
RefSeq Acc Id: XM_038575721   ⟹   XP_038431649
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,955,856 (-)NCBI
RefSeq Acc Id: XM_038575722   ⟹   XP_038431650
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,945,384 (-)NCBI
RefSeq Acc Id: XM_038575723   ⟹   XP_038431651
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,921,795 (-)NCBI
RefSeq Acc Id: XM_038575724   ⟹   XP_038431652
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,941,427 (-)NCBI
RefSeq Acc Id: XM_038575725   ⟹   XP_038431653
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,922,501 (-)NCBI
RefSeq Acc Id: XM_038575726   ⟹   XP_038431654
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02624,912,293 - 24,921,667 (-)NCBI
RefSeq Acc Id: XM_038639914   ⟹   XP_038495842
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,857,450 (-)NCBI
RefSeq Acc Id: XM_038639915   ⟹   XP_038495843
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,861,204 (-)NCBI
RefSeq Acc Id: XM_038639916   ⟹   XP_038495844
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,894,046 (-)NCBI
RefSeq Acc Id: XM_038639917   ⟹   XP_038495845
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,883,545 (-)NCBI
RefSeq Acc Id: XM_038639918   ⟹   XP_038495846
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,859,947 (-)NCBI
RefSeq Acc Id: XM_038639919   ⟹   XP_038495847
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,879,817 (-)NCBI
RefSeq Acc Id: XM_038639920   ⟹   XP_038495848
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,860,653 (-)NCBI
RefSeq Acc Id: XM_038639921   ⟹   XP_038495849
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02624,850,091 - 24,859,819 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005636533 (Get FASTA)   NCBI Sequence Viewer  
  XP_005636534 (Get FASTA)   NCBI Sequence Viewer  
  XP_005636536 (Get FASTA)   NCBI Sequence Viewer  
  XP_022265943 (Get FASTA)   NCBI Sequence Viewer  
  XP_022265944 (Get FASTA)   NCBI Sequence Viewer  
  XP_022265945 (Get FASTA)   NCBI Sequence Viewer  
  XP_022265946 (Get FASTA)   NCBI Sequence Viewer  
  XP_022265948 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293247 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293248 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293249 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293250 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293251 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293252 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293253 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293254 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368143 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368144 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368145 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368146 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368147 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368148 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368149 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368150 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431646 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431647 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431649 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431650 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431651 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431652 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431653 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431654 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495842 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495843 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495844 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495845 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495846 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495847 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495848 (Get FASTA)   NCBI Sequence Viewer  
  XP_038495849 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000019494.4
  ENSCAFP00000019497.3
  ENSCAFP00030041788.1
  ENSCAFP00030041794.1
  ENSCAFP00040040061.1
  ENSCAFP00040040081.1
  ENSCAFP00845034442
  ENSCAFP00845034442.1
  ENSCAFP00845034497
  ENSCAFP00845034497.1
  ENSCAFP00845034568
  ENSCAFP00845034568.1
RefSeq Acc Id: XP_005636534   ⟸   XM_005636477
- Peptide Label: isoform X3
- UniProtKB: A0A8C0JL11 (UniProtKB/TrEMBL),   A0A8C0TP12 (UniProtKB/TrEMBL),   A0A8I3S4Y8 (UniProtKB/TrEMBL),   A0A8P0SI89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005636533   ⟸   XM_005636476
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005636536   ⟸   XM_005636479
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022265944   ⟸   XM_022410236
- Peptide Label: isoform X4
- UniProtKB: A0A8I3PJ70 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022265946   ⟸   XM_022410238
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022265945   ⟸   XM_022410237
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022265948   ⟸   XM_022410240
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022265943   ⟸   XM_022410235
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCAFP00000019494   ⟸   ENSCAFT00000020994
RefSeq Acc Id: ENSCAFP00000019497   ⟸   ENSCAFT00000020997
RefSeq Acc Id: ENSCAFP00000054726   ⟸   ENSCAFT00000074173
RefSeq Acc Id: ENSCAFP00000053694   ⟸   ENSCAFT00000074424
RefSeq Acc Id: XP_038368145   ⟸   XM_038512217
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038368146   ⟸   XM_038512218
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038368148   ⟸   XM_038512220
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038368144   ⟸   XM_038512216
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038368149   ⟸   XM_038512221
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038368147   ⟸   XM_038512219
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038368150   ⟸   XM_038512222
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038368143   ⟸   XM_038512215
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038495844   ⟸   XM_038639916
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038495845   ⟸   XM_038639917
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038495847   ⟸   XM_038639919
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038495843   ⟸   XM_038639915
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038495848   ⟸   XM_038639920
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038495846   ⟸   XM_038639918
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038495849   ⟸   XM_038639921
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038495842   ⟸   XM_038639914
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038293249   ⟸   XM_038437321
- Peptide Label: isoform X3
- UniProtKB: A0A8C0JL11 (UniProtKB/TrEMBL),   A0A8C0TP12 (UniProtKB/TrEMBL),   A0A8I3S4Y8 (UniProtKB/TrEMBL),   A0A8P0SI89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293250   ⟸   XM_038437322
- Peptide Label: isoform X4
- UniProtKB: A0A8I3PJ70 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293252   ⟸   XM_038437324
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293248   ⟸   XM_038437320
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038293253   ⟸   XM_038437325
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293251   ⟸   XM_038437323
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293254   ⟸   XM_038437326
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JJF4 (UniProtKB/TrEMBL),   A0A8C0TNS6 (UniProtKB/TrEMBL),   A0A8I3PTL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293247   ⟸   XM_038437319
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038431649   ⟸   XM_038575721
- Peptide Label: isoform X3
- UniProtKB: A0A8I3S4Y8 (UniProtKB/TrEMBL),   A0A8P0SI89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431650   ⟸   XM_038575722
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038431652   ⟸   XM_038575724
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PYD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431647   ⟸   XM_038575719
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038431653   ⟸   XM_038575725
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PYD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431651   ⟸   XM_038575723
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PYD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431654   ⟸   XM_038575726
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PYD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431646   ⟸   XM_038575718
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCAFP00845034497   ⟸   ENSCAFT00845044023
RefSeq Acc Id: ENSCAFP00845034442   ⟸   ENSCAFT00845043949
RefSeq Acc Id: ENSCAFP00845034568   ⟸   ENSCAFT00845044119

Promoters
RGD ID:13687987
Promoter ID:EPDNEW_C6052
Type:single initiation site
Name:PISD_1
Description:phosphatidylserine decarboxylase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12624,545,920 - 24,545,980EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000013233 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030025878 UniProtKB/TrEMBL
  ENSCAFG00040024645 UniProtKB/TrEMBL
  ENSCAFG00845024889 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000020994.6 UniProtKB/TrEMBL
  ENSCAFT00000020997.5 UniProtKB/TrEMBL
  ENSCAFT00030047778.1 UniProtKB/TrEMBL
  ENSCAFT00030047784.1 UniProtKB/TrEMBL
  ENSCAFT00040045913.1 UniProtKB/TrEMBL
  ENSCAFT00040045937.1 UniProtKB/TrEMBL
  ENSCAFT00845043949 ENTREZGENE
  ENSCAFT00845043949.1 UniProtKB/TrEMBL
  ENSCAFT00845044023 ENTREZGENE
  ENSCAFT00845044023.1 UniProtKB/TrEMBL
  ENSCAFT00845044119 ENTREZGENE
  ENSCAFT00845044119.1 UniProtKB/TrEMBL
InterPro PS_Dcarbxylase UniProtKB/TrEMBL
  PSD UniProtKB/TrEMBL
  PSD_type1_euk UniProtKB/TrEMBL
NCBI Gene PISD ENTREZGENE
PANTHER PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR10067 UniProtKB/TrEMBL
Pfam PS_Dcarbxylase UniProtKB/TrEMBL
UniProt A0A8C0JJF4 ENTREZGENE
  A0A8C0JL11 ENTREZGENE
  A0A8C0PHJ3_CANLF UniProtKB/TrEMBL
  A0A8C0PYD7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TNS6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TP12 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PJ70 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PTL0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S4Y8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SI89 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:44581 ENTREZGENE