NDUFB6 (NADH:ubiquinone oxidoreductase subunit B6) - Rat Genome Database

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Gene: NDUFB6 (NADH:ubiquinone oxidoreductase subunit B6) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: NDUFB6
Name: NADH:ubiquinone oxidoreductase subunit B6
RGD ID: 12176813
Description: INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrial respiratory chain complex I (inferred)
Type: pseudo (Ensembl: protein-coding)
RefSeq Status: INFERRED
Previously known as: LOC100684565; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 pseudogene
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Related Functional Gene: NDUFB6  
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1223,525,991 - 3,526,519 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha223,563,689 - 3,564,217 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0223,643,836 - 3,644,364 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl223,643,960 - 3,644,346 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1223,428,102 - 3,428,630 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0223,491,448 - 3,491,976 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0223,496,226 - 3,496,754 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Variants

.
Variants in NDUFB6
5 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00845012301   ⟹   ENSCAFP00845009614
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl223,643,960 - 3,644,346 (-)Ensembl
Protein Sequences
Ensembl Protein ENSCAFP00000072887.1
  ENSCAFP00030012667.1
  ENSCAFP00040009781.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00845009614   ⟸   ENSCAFT00845012301

Promoters
RGD ID:13687301
Promoter ID:EPDNEW_C5368
Type:single initiation site
Name:NDUFB6_1
Description:NADH:ubiquinone oxidoreductase subunit B6
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1223,526,519 - 3,526,579EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000053123 UniProtKB/TrEMBL
  ENSCAFG00030007892 UniProtKB/TrEMBL
  ENSCAFG00040006046 UniProtKB/TrEMBL
  ENSCAFG00845006932 Ensembl, ENTREZGENE
Ensembl Transcript ENSCAFT00000107871.1 UniProtKB/TrEMBL
  ENSCAFT00030014525.1 UniProtKB/TrEMBL
  ENSCAFT00040011292.1 UniProtKB/TrEMBL
InterPro NADH_DH_b-subcmplx_su6 UniProtKB/TrEMBL
NCBI Gene LOC100684565 ENTREZGENE
PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 6 UniProtKB/TrEMBL
  PTHR15083 UniProtKB/TrEMBL
Pfam NDUF_B6 UniProtKB/TrEMBL
UniProt A0A8C0Q7R4_CANLF UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-07-26 NDUFB6  NADH:ubiquinone oxidoreductase subunit B6  LOC100684565  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 pseudogene  Symbol and/or name change 19259463 PROVISIONAL