ESYT3 (extended synaptotagmin 3) - Rat Genome Database

Name: ESYT3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ESYT3 (extended synaptotagmin 3) Canis lupus familiaris

Analyze

Symbol:

ESYT3

Name:

extended synaptotagmin 3

RGD ID:

12163361

Description:

ENCODES a protein that exhibits calcium ion binding (inferred); calcium-dependent phospholipid binding (inferred); lipid binding (inferred); INVOLVED IN endoplasmic reticulum-plasma membrane tethering (inferred); lipid transport (inferred); FOUND IN cytoplasmic side of plasma membrane (inferred); endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

extended synaptotagmin-3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ESYT3 (extended synaptotagmin 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Esyt3 (extended synaptotagmin-like protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Esyt3 (extended synaptotagmin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Esyt3 (extended synaptotagmin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ESYT3 (extended synaptotagmin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Esyt3 (extended synaptotagmin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ESYT3 (extended synaptotagmin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ESYT3 (extended synaptotagmin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Esyt3 (extended synaptotagmin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	34,645,248 - 34,692,178 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	34,645,087 - 34,691,939 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	34,639,173 - 34,685,862 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	35,187,397 - 35,234,172 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	35,187,162 - 35,233,932 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	34,868,467 - 34,915,155 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	34,934,284 - 34,980,995 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	35,185,169 - 35,231,861 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

endoplasmic reticulum-plasma membrane tethering (IEA)

lipid transport (IEA)

Cellular Component

cytoplasmic side of plasma membrane (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA)

endoplasmic reticulum-plasma membrane contact site (IEA)

extrinsic component of cytoplasmic side of plasma membrane (IEA)

organelle membrane contact site (IEA)

plasma membrane (IEA)

Molecular Function

calcium ion binding (IEA)

calcium-dependent phospholipid binding (IEA)

lipid binding (IEA)

phosphatidylcholine binding (IEA)

phosphatidylethanolamine binding (IEA)

phosphatidylinositol binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

ESYT3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	34,645,248 - 34,692,178 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	34,645,087 - 34,691,939 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	34,639,173 - 34,685,862 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	35,187,397 - 35,234,172 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	35,187,162 - 35,233,932 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	34,868,467 - 34,915,155 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	34,934,284 - 34,980,995 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	35,185,169 - 35,231,861 (+)	NCBI		UU_Cfam_GSD_1.0

ESYT3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	138,434,616 - 138,481,686 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	138,434,586 - 138,481,686 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	138,153,458 - 138,200,528 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	139,636,109 - 139,678,399 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	136,578,324 - 136,622,170 (+)	NCBI		Celera
Cytogenetic Map	3	q22.3	NCBI
HuRef	3	135,528,375 - 135,572,226 (+)	NCBI		HuRef
CHM1_1	3	138,117,188 - 138,161,034 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	141,175,169 - 141,222,247 (+)	NCBI		T2T-CHM13v2.0

Esyt3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	99,192,016 - 99,242,210 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	99,192,016 - 99,240,610 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	99,309,963 - 99,360,159 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	99,309,963 - 99,358,557 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	99,210,386 - 99,258,949 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	99,119,495 - 99,167,882 (-)	NCBI		MGSCv36	mm8
Celera	9	98,843,495 - 98,893,869 (-)	NCBI		Celera
Cytogenetic Map	9	E3.3	NCBI
cM Map	9	51.54	NCBI

Esyt3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	108,749,761 - 108,796,630 (-)	NCBI		GRCr8
mRatBN7.2	8	99,870,418 - 99,917,298 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	99,871,149 - 99,917,232 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	8	107,555,417 - 107,602,414 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	107,555,277 - 107,602,263 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	106,981,121 - 107,027,963 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	104,171,726 - 104,216,761 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	99,272,485 - 99,319,481 (-)	NCBI		Celera
Cytogenetic Map	8	q31	NCBI

Esyt3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955501	538,538 - 585,505 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955501	537,195 - 585,640 (-)	NCBI	ChiLan1.0	ChiLan1.0

ESYT3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	136,340,722 - 136,384,571 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	136,345,050 - 136,392,918 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	135,463,698 - 135,509,417 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	142,913,450 - 142,958,684 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	142,913,450 - 142,958,684 (+)	Ensembl	panpan1.1		panPan2

Esyt3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	74,005,161 - 74,046,610 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936540	744,980 - 785,113 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936540	744,980 - 786,303 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ESYT3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	79,245,836 - 79,297,334 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	79,245,818 - 79,295,471 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	86,861,629 - 86,898,873 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ESYT3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	52,062,156 - 52,130,942 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	52,062,357 - 52,104,852 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	25,074,492 - 25,119,220 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Esyt3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	14,986,750 - 15,033,870 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	14,986,583 - 15,035,163 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ESYT3
798 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium							6		1
Low	5		11		6				11	8	10
Below cutoff		5	11	6		6		6				6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038432466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038432467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038456930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038507772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_542806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000012101 ⟹ ENSCAFP00000011219

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	34,645,087 - 34,691,939 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000076399 ⟹ ENSCAFP00000049142

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	34,645,087 - 34,690,698 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000081254 ⟹ ENSCAFP00000054161

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	23	34,645,087 - 34,690,698 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845043680 ⟹ ENSCAFP00845034223

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	35,187,162 - 35,233,932 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845043914 ⟹ ENSCAFP00845034414

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	35,187,162 - 35,232,691 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845044107 ⟹ ENSCAFP00845034561

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	35,187,162 - 35,232,691 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845044319 ⟹ ENSCAFP00845034725

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	23	35,187,162 - 35,232,691 (+)	Ensembl

RefSeq Acc Id:

XM_038432466 ⟹ XP_038288394

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	35,187,397 - 35,233,888 (+)	NCBI

RefSeq Acc Id:

XM_038432467 ⟹ XP_038288395

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	23	35,187,397 - 35,234,172 (+)	NCBI

RefSeq Acc Id:

XM_038456930 ⟹ XP_038312858

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	23	34,639,173 - 34,685,578 (+)	NCBI

RefSeq Acc Id:

XM_038507770 ⟹ XP_038363698

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	34,868,467 - 34,914,871 (+)	NCBI

RefSeq Acc Id:

XM_038507772 ⟹ XP_038363700

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	23	34,868,467 - 34,915,155 (+)	NCBI

RefSeq Acc Id:

XM_038571012 ⟹ XP_038426940

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	35,185,169 - 35,231,577 (+)	NCBI

RefSeq Acc Id:

XM_038571013 ⟹ XP_038426941

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	23	35,185,169 - 35,231,861 (+)	NCBI

RefSeq Acc Id:

XM_038635203 ⟹ XP_038491131

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	34,934,284 - 34,980,711 (+)	NCBI

RefSeq Acc Id:

XM_038635204 ⟹ XP_038491132

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	23	34,934,284 - 34,980,995 (+)	NCBI

RefSeq Acc Id:

XM_542806 ⟹ XP_542806

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	34,645,248 - 34,692,178 (+)	NCBI
Dog10K_Boxer_Tasha	23	34,639,173 - 34,685,862 (+)	NCBI

Sequence:

show sequence

CCGGCTGGGAGCCGAGCGCGGCGGCCGCGCCCCGAGTCCGCAGACCCAGCGCTCCCGGGCGGGG
CGGCCTCGGAGCTGAGCGCCCGGAGCGCGGCGGCGGGTCCCGCAGGGCAGGTGCGGCGCGGCGG
CTGGGCCCTCGCGCTTGGCGGGCCGATGTGCCCGCGTGTCGGGGCCTGTGGACCTGGGCTCAGG
TGAAGCTCCGGGAAAGGGCGACACGGCGGGGCGAGATGGCGGACGAGCCCCGCGCCCCCGGCGC
CCCGGGAGGCCAGCGCGCACCCCGCCCCGAGCCGCGCCTGTCCAGCCAGCTGCTGCCCGAGCTC
TACACCTTCGTGGCCCGAGTGCTGTTCTACCTGNNNNNNNNNNGCTCCGTCTACCTGGCCGGCT
ACCTGGGGCTCAGCATAACCTGGCTGCTGCTCGGCGCTCTGCTGTGGATGTGGTGGCGCAGGAA
CCGGCGCGGGAAGCTCGGGCGCCTGGCGGCCGCCTTCCAGTTCCTGGACAACGAGCGCCAGTTC
ATTAGCCGGGAGCTGCGGGGCCAGCACCTGCCGGCCTGGATCCACTTCCCGGATGTGGAGCGGG
TCGAGTGGGCCAACAAGATCATCTCTCAGATCTGGCCCTACCTGAGCATGATCATGGAAAACAA
GTTCCGGGAAAAGCTCGAGCCCAAGATCCGAGAGAAGAGCAGCCACCTGAGGACCTTCACATTC
ACCAAGCTCTACTTTGGACAAAAGTGCCCCAGGGTCAACGGTGTCAAGGCGCACACTAACAAGC
GCAACCGAAGACAGGTGGTCCTGGACCTGCAGATTTGCTACATCGGGGACTGCGAGATCAGTGC
GGAGCTGCAGAAGATACAGGCTGGCGTGAACGGGATTCAGTTGCAGGGCACGCTGCGGGTCATC
CTGGAGCCCCTCCTGGTGGACAAGCCCTTTGTGGGAGCCGTTACCGTGTTCTTCCTTCAAAAGC
CGCATCTGCAGATCAACTGGACAGGCCTGACCAACCTGTTGGATGCACCGGGAATCAATGAGAT
ATCAGACAGCCTGCTGGAGGACCTCATTGCCACCCACCTGGTGCTGCCCAACCGCGTGACCGTG
CCTGTGAAGAAGGGGCTGGATGTGACCAACCTGCTCTTCCCTCTGCCCTGCGGAGTGATCAGAG
TCCACTTGCTGGAGGCAGAGAAGCTGGCTCAGAAGGACAACTTCCTAGGGATCCGAGGCAAGTC
AGACCCCTACGCCAAGGTGAGCATTGGCCTACAGCAATTCCGGAGTAAGACCATCTACAAGAAC
CTGAACCCCACCTGGAATGAGGTATTTGAGTTTGTAGTGTATGAAGTCCCTGGGCAGGACCTAG
AGGTGGACCTGTATGATGAGGATCCCGACAGGGACGACTTCCTGGGCAGCCTGCAGATCTGCCT
CGGGGATGTCATGACGAACAGAGTGGTGGATGAGTGGTTTGTCCTGAACGACACAACCAGTGGG
CGGCTGCACCTGCGGCTGGAGTGGCTTTCGCTCATCGCCAACCCAGAAGCTCTGATTGAGGACC
AAGGTGGCCTTTCAACTGCCATCCTCATAGTCTTCTTGGAGAGTGCCTGCAACCTGCCGAGAAA
TCCTTTTGACTACCTGAATGGTGAATATCGAGCCAAAAAACTCTCCAGGTTTACCAAGAATAAA
GTCAGCAGAGACCCTTCTTCCTATGTCAAGCTATCTGTAGGCAAGAAGACACAGATGAGCAAGA
CCTGTCCCCACAGCAAGGACCCAGTGTGGAGCCAGATGTTCTCCTTCTTTGTGTACAATGTGGC
AGCTGAGGAGCTGCATCTGAAGGTGCTTGATGATACCCAAGAGTGTGCTCTGGGAGTGCTGGAG
TTCCCCCTGTGCCAGATCCTCCCCTACACAGACCTCACCCTCGAGCAGCGCTTCCAGCTGGACC
ACTCAGGCCTAGACAGCCTCATCTCCATGAGGCTGGTGCTTCGGTTCCTGCGCGTGGAAGAACG
AGAGATGGGGAGCCCATACACAGGACCTGAAGCCCTAAAGAAAGGTCCTCTGTTCATTAAGAAG
GTGGACACCAACCAGAACCCCAAAGCCCCAACCCAGGGAGAGTGCCCTGCAAATTTGCCATGCC
CCCCAGATCCTGCTTCTGATACCAAAGAAGCCTCCAAGAGCACCACGACAACCACCAGTGCCAC
TATTGTTGCCACCGAGCCCACACCCCAAGACACAGGCCCAGAGCCCAAAGGCAAGGACAGTGCC
AGAGGGTTCTGTGAGCCCATGGGGAAGAAGAAGAGTTCGGCCACCATCTTCCTGACTGTCCCAG
GCCCCCACTCTCCAGGGCCCATCAAGTCACCCAGACCCATGAAATGCCCTGCCTCCCCACTCGC
ATGGCCGCCCAAGAGGCTAGCTCCCAGCATGTCCTCGCTCAACTCCCTGGCCTCCTCCTGCTTT
GATCTGACAGAGATCAGCTTCAACATTGAAGGCGGGGATCTCAGGCAGTGGAGGCTGGGTGAGA
TTCAGCTCACAGTGCGTTATGTGTGTCTGCGGCGCTGCCTCAGTGTGCTCATCAATGGCTGCAG
AAACCTGACACCCTGTACCAGCAGTGGAGCTGATCCCTATGTCCGCATCTACTTGTTACCAGAA
AGGAGGTGGGCAAGTCGTAAGAAGACCTCAGTAAAACGGAAGACCCTGGAACCCCTGTTTGATG
AGACATTTGAATTTTTTGTTCCCATGGAAGAAGTAAAGAAGAGGTCACTAGATGTTGCAGTGAA
AAACAGTAGGCCACTTGGCTCACATAGAAGGAAGGAACTAGGAAAAGTACTGATTGACTTATCA
AAAGAGGATCTAATTAAGGGCTTCTCACGATGGTATGAGCTGACTCCAGATGGACAGCCCAGAA
GTTGATGAGCACCCTTCCACCTTTATATTAAGATGTGTACATATGTATATTTTGTAATTTAAGT
CAGAACAGCCATTTGAAAATATATACATACATTTTTGTGTGAAATTTAAATATATGACTGGATA
GTATTAGGAAGAGGTAAACATATATAAAAGCAAGTACTACTCTCTCTTGGTTGGATTTAATTGT
TCAAATCCAGAAAGAAATGGGGTATTTATGCCTAATAAATTATTGGAACCTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_038288394	(Get FASTA)	NCBI Sequence Viewer
	XP_038288395	(Get FASTA)	NCBI Sequence Viewer
	XP_038312858	(Get FASTA)	NCBI Sequence Viewer
	XP_038363698	(Get FASTA)	NCBI Sequence Viewer
	XP_038363700	(Get FASTA)	NCBI Sequence Viewer
	XP_038426940	(Get FASTA)	NCBI Sequence Viewer
	XP_038426941	(Get FASTA)	NCBI Sequence Viewer
	XP_038491131	(Get FASTA)	NCBI Sequence Viewer
	XP_038491132	(Get FASTA)	NCBI Sequence Viewer
	XP_542806	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000011219.4
	ENSCAFP00000049142.2
	ENSCAFP00000054161.2
	ENSCAFP00030022134.1
	ENSCAFP00030022323.1
	ENSCAFP00030022497.1
	ENSCAFP00030022654.1
	ENSCAFP00040040671.1
	ENSCAFP00040040720.1
	ENSCAFP00040040760.1
	ENSCAFP00040040795.1
	ENSCAFP00040040826.1
	ENSCAFP00845034223
	ENSCAFP00845034223.1
	ENSCAFP00845034414.1
	ENSCAFP00845034561.1
	ENSCAFP00845034725.1

RefSeq Acc Id:	XP_542806 ⟸ XM_542806
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TUU7 (UniProtKB/TrEMBL), A0A8I3PNP9 (UniProtKB/TrEMBL), A0A8C0K2N6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADEPRAPGAPGGQRAPRPEPRLSSQLLPELYTFVARVLFYLXXXXSVYLAGYLGLSITWLLLG ALLWMWWRRNRRGKLGRLAAAFQFLDNERQFISRELRGQHLPAWIHFPDVERVEWANKIISQIW PYLSMIMENKFREKLEPKIREKSSHLRTFTFTKLYFGQKCPRVNGVKAHTNKRNRRQVVLDLQI CYIGDCEISAELQKIQAGVNGIQLQGTLRVILEPLLVDKPFVGAVTVFFLQKPHLQINWTGLTN LLDAPGINEISDSLLEDLIATHLVLPNRVTVPVKKGLDVTNLLFPLPCGVIRVHLLEAEKLAQK DNFLGIRGKSDPYAKVSIGLQQFRSKTIYKNLNPTWNEVFEFVVYEVPGQDLEVDLYDEDPDRD DFLGSLQICLGDVMTNRVVDEWFVLNDTTSGRLHLRLEWLSLIANPEALIEDQGGLSTAILIVF LESACNLPRNPFDYLNGEYRAKKLSRFTKNKVSRDPSSYVKLSVGKKTQMSKTCPHSKDPVWSQ MFSFFVYNVAAEELHLKVLDDTQECALGVLEFPLCQILPYTDLTLEQRFQLDHSGLDSLISMRL VLRFLRVEEREMGSPYTGPEALKKGPLFIKKVDTNQNPKAPTQGECPANLPCPPDPASDTKEAS KSTTTTTSATIVATEPTPQDTGPEPKGKDSARGFCEPMGKKKSSATIFLTVPGPHSPGPIKSPR PMKCPASPLAWPPKRLAPSMSSLNSLASSCFDLTEISFNIEGGDLRQWRLGEIQLTVRYVCLRR CLSVLINGCRNLTPCTSSGADPYVRIYLLPERRWASRKKTSVKRKTLEPLFDETFEFFVPMEEV KKRSLDVAVKNSRPLGSHRRKELGKVLIDLSKEDLIKGFSRWYELTPDGQPRS hide sequence

RefSeq Acc Id:

ENSCAFP00000049142 ⟸ ENSCAFT00000076399

RefSeq Acc Id:

ENSCAFP00000011219 ⟸ ENSCAFT00000012101

RefSeq Acc Id:

ENSCAFP00000054161 ⟸ ENSCAFT00000081254

RefSeq Acc Id:	XP_038363700 ⟸ XM_038507772
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038363698 ⟸ XM_038507770
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038491132 ⟸ XM_038635204
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038491131 ⟸ XM_038635203
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038288395 ⟸ XM_038432467
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TUU7 (UniProtKB/TrEMBL), A0A8I3PNP9 (UniProtKB/TrEMBL), A0A8C0K2N6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038288394 ⟸ XM_038432466
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TQ93 (UniProtKB/TrEMBL), A0A8C0K2N6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038312858 ⟸ XM_038456930
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TQ93 (UniProtKB/TrEMBL), A0A8C0K2N6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038426941 ⟸ XM_038571013
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0K2N6 (UniProtKB/TrEMBL), A0A8C0TUU7 (UniProtKB/TrEMBL), A0A8I3PNP9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038426940 ⟸ XM_038571012
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0K2N6 (UniProtKB/TrEMBL), A0A8C0TQ93 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845034725 ⟸ ENSCAFT00845044319

RefSeq Acc Id:

ENSCAFP00845034223 ⟸ ENSCAFT00845043680

RefSeq Acc Id:

ENSCAFP00845034414 ⟸ ENSCAFT00845043914

RefSeq Acc Id:

ENSCAFP00845034561 ⟸ ENSCAFT00845044107

Protein Domains

C2 SMP-LTD

Promoters

RGD ID:

13687457

Promoter ID:

EPDNEW_C5524

Type:

single initiation site

Name:

ESYT3_1

Description:

extended synaptotagmin 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	23	34,645,252 - 34,645,312	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000007551	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030013468	UniProtKB/TrEMBL
	ENSCAFG00040024899	UniProtKB/TrEMBL
	ENSCAFG00845024743	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000012101.5	UniProtKB/TrEMBL
	ENSCAFT00000076399.2	UniProtKB/TrEMBL
	ENSCAFT00000081254.2	UniProtKB/TrEMBL
	ENSCAFT00030025343.1	UniProtKB/TrEMBL
	ENSCAFT00030025568.1	UniProtKB/TrEMBL
	ENSCAFT00030025746.1	UniProtKB/TrEMBL
	ENSCAFT00030025938.1	UniProtKB/TrEMBL
	ENSCAFT00040046604.1	UniProtKB/TrEMBL
	ENSCAFT00040046658.1	UniProtKB/TrEMBL
	ENSCAFT00040046700.1	UniProtKB/TrEMBL
	ENSCAFT00040046736.1	UniProtKB/TrEMBL
	ENSCAFT00040046773.1	UniProtKB/TrEMBL
	ENSCAFT00845043680	ENTREZGENE
	ENSCAFT00845043680.1	UniProtKB/TrEMBL
	ENSCAFT00845043914.1	UniProtKB/TrEMBL
	ENSCAFT00845044107.1	UniProtKB/TrEMBL
	ENSCAFT00845044319.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.150	UniProtKB/TrEMBL
InterPro	C2_dom	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	C2C_KIAA1228	UniProtKB/TrEMBL
	Ext_Synaptotagmin_C2A	UniProtKB/TrEMBL
	Ext_Synaptotagmin_C2B	UniProtKB/TrEMBL
	SMP_LBD	UniProtKB/TrEMBL
	Synaptotagmin_SMP	UniProtKB/TrEMBL
NCBI Gene	ESYT3	ENTREZGENE
PANTHER	EXTENDED SYNAPTOTAGMIN-3	UniProtKB/TrEMBL
	EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM C	UniProtKB/TrEMBL
Pfam	PF00168	UniProtKB/TrEMBL
	SMP_LBD	UniProtKB/TrEMBL
PRINTS	C2DOMAIN	UniProtKB/TrEMBL
PROSITE	PS50004	UniProtKB/TrEMBL
	SMP	UniProtKB/TrEMBL
SMART	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49562	UniProtKB/TrEMBL
UniProt	A0A8C0K2N6	ENTREZGENE
	A0A8C0TQ93	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TS63_CANLF	UniProtKB/TrEMBL
	A0A8C0TSU8_CANLF	UniProtKB/TrEMBL
	A0A8C0TUU7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TV18_CANLF	UniProtKB/TrEMBL
	A0A8I3PJQ1_CANLF	UniProtKB/TrEMBL
	A0A8I3PNP9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PS13_CANLF	UniProtKB/TrEMBL
	A0A8I3S921_CANLF	UniProtKB/TrEMBL
	A0A8P0NZ27_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:40485	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message