DYNAP (dynactin associated protein) - Rat Genome Database

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Gene: DYNAP (dynactin associated protein) Canis lupus familiaris
Analyze
Symbol: DYNAP
Name: dynactin associated protein
RGD ID: 12161503
Description: INVOLVED IN cellular response to ergosterol (ortholog); positive regulation of cell population proliferation (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN Golgi apparatus (inferred); membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC610632
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1120,901,160 - 20,907,334 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,885,275 - 21,891,441 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0120,787,293 - 20,793,471 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1120,840,062 - 20,849,691 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0120,735,926 - 20,742,085 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,007,570 - 21,013,735 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
DYNAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1120,901,160 - 20,907,334 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,885,275 - 21,891,441 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0120,787,293 - 20,793,471 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1120,840,062 - 20,849,691 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0120,735,926 - 20,742,085 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,007,570 - 21,013,735 (-)NCBIUU_Cfam_GSD_1.0
DYNAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381854,575,621 - 54,599,493 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1854,587,757 - 54,599,493 (+)EnsemblGRCh38hg38GRCh38
GRCh371852,254,990 - 52,266,724 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361850,409,388 - 50,417,722 (+)NCBINCBI36Build 36hg18NCBI36
Build 341850,409,387 - 50,417,722NCBI
Celera1848,975,950 - 48,984,284 (+)NCBICelera
Cytogenetic Map18q21.2NCBI
HuRef1848,968,247 - 48,976,581 (+)NCBIHuRef
CHM1_11852,253,629 - 52,261,962 (+)NCBICHM1_1
T2T-CHM13v2.01854,778,729 - 54,802,601 (+)NCBIT2T-CHM13v2.0
Dynap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391870,373,500 - 70,377,655 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1870,373,500 - 70,377,653 (-)EnsemblGRCm39 Ensembl
GRCm381870,240,429 - 70,244,584 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1870,240,429 - 70,244,582 (-)EnsemblGRCm38mm10GRCm38
MGSCv371870,400,083 - 70,404,236 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361870,365,798 - 70,369,951 (-)NCBIMGSCv36mm8
Celera1871,528,844 - 71,532,997 (-)NCBICelera
Cytogenetic Map18E2NCBI
cM Map1844.21NCBI
Dynapl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81866,140,515 - 66,143,717 (-)NCBIGRCr8
mRatBN7.21863,865,136 - 63,868,338 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1863,865,133 - 63,868,338 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01868,752,224 - 68,755,426 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1868,752,227 - 68,755,426 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01867,904,664 - 67,907,866 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1861,946,858 - 61,950,060 (-)NCBICelera
Cytogenetic Map18q12.1NCBI
Dynap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540239,097,723 - 39,142,938 (+)NCBIChiLan1.0ChiLan1.0
DYNAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21772,114,853 - 72,126,576 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11857,807,464 - 57,819,523 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01847,955,919 - 47,979,145 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11851,292,306 - 51,314,949 (+)NCBIpanpan1.1PanPan1.1panPan2
LOC106508962
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11104,157,113 - 104,169,200 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21114,498,469 - 114,510,015 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DYNAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11825,106,045 - 25,113,911 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1825,106,265 - 25,112,995 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666060417,163 - 428,392 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in DYNAP
86 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6 6
Low 5 10 10
Below cutoff 5 2 4 6 5 8

Sequence


Reference Sequences
RefSeq Acc Id: XM_038464994   ⟹   XP_038320922
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1120,840,062 - 20,846,221 (-)NCBI
RefSeq Acc Id: XM_038464995   ⟹   XP_038320923
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1120,840,062 - 20,849,691 (-)NCBI
RefSeq Acc Id: XM_038525573   ⟹   XP_038381501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0121,007,570 - 21,013,735 (-)NCBI
RefSeq Acc Id: XM_038589778   ⟹   XP_038445706
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0120,735,926 - 20,742,085 (-)NCBI
RefSeq Acc Id: XM_038653701   ⟹   XP_038509629
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0120,787,293 - 20,793,471 (-)NCBI
RefSeq Acc Id: XM_848168   ⟹   XP_853261
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1120,901,160 - 20,907,334 (-)NCBI
Dog10K_Boxer_Tasha121,885,275 - 21,891,441 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_853261   ⟸   XM_848168
- Peptide Label: isoform X1
- UniProtKB: A0A8C0YV31 (UniProtKB/TrEMBL),   A0A8I3MLE8 (UniProtKB/TrEMBL),   A0A8I3MNI2 (UniProtKB/TrEMBL),   A0A8P0PR62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038320923   ⟸   XM_038464995
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038320922   ⟸   XM_038464994
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038445706   ⟸   XM_038589778
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038509629   ⟸   XM_038653701
- Peptide Label: isoform X1
- UniProtKB: A0A8C0YV31 (UniProtKB/TrEMBL),   A0A8I3MLE8 (UniProtKB/TrEMBL),   A0A8I3MNI2 (UniProtKB/TrEMBL),   A0A8P0PR62 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038381501   ⟸   XM_038525573
- Peptide Label: isoform X1
- UniProtKB: A0A8C0YV31 (UniProtKB/TrEMBL),   A0A8I3MLE8 (UniProtKB/TrEMBL),   A0A8I3MNI2 (UniProtKB/TrEMBL),   A0A8P0PR62 (UniProtKB/TrEMBL)
Protein Domains
CLLAC-motif containing


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000028993 UniProtKB/TrEMBL
  ENSCAFG00030005307 UniProtKB/TrEMBL
  ENSCAFG00040010896 UniProtKB/TrEMBL
  ENSCAFG00845002605 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000045996.3 UniProtKB/TrEMBL
  ENSCAFT00000108125.1 UniProtKB/TrEMBL
  ENSCAFT00030009708.1 UniProtKB/TrEMBL
  ENSCAFT00040020113.1 UniProtKB/TrEMBL
  ENSCAFT00845004596 ENTREZGENE
  ENSCAFT00845004596.1 UniProtKB/TrEMBL
  ENSCAFT00845004610.1 UniProtKB/TrEMBL
InterPro CLLAC UniProtKB/TrEMBL
KEGG Report cfa:610632 UniProtKB/TrEMBL
NCBI Gene LOC610632 ENTREZGENE
PANTHER DYNACTIN-ASSOCIATED PROTEIN UniProtKB/TrEMBL
  DYNACTIN-ASSOCIATED PROTEIN UniProtKB/TrEMBL
Pfam CLLAC UniProtKB/TrEMBL
UniProt A0A8C0YV31 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MLE8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MNI2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PR62 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-09 DYNAP  dynactin associated protein  LOC610632  dynactin associated protein  Symbol and/or name change 5135510 APPROVED
2021-01-12 LOC610632  dynactin associated protein  LOC610632  dynactin-associated protein  Symbol and/or name change 5135510 APPROVED