KASH5 (KASH domain containing 5) - Rat Genome Database

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Gene: KASH5 (KASH domain containing 5) Canis lupus familiaris
Analyze
Symbol: KASH5
Name: KASH domain containing 5
RGD ID: 12143665
Description: ENCODES a protein that exhibits dynein complex binding (inferred); identical protein binding (inferred); INVOLVED IN chromosome localization to nuclear envelope involved in homologous chromosome segregation (ortholog); double-strand break repair via homologous recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH azoospermia (ortholog); developmental and epileptic encephalopathy 12 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN chromosome, telomeric region (inferred); lateral element (inferred); meiotic nuclear membrane microtubule tethering complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CCDC155; coiled-coil domain containing 155
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,074,010 - 107,114,460 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,074,010 - 107,097,762 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1106,657,279 - 106,681,125 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1107,594,087 - 107,617,934 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
KASH5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,074,010 - 107,114,460 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,074,010 - 107,097,762 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1106,657,279 - 106,681,125 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1107,594,087 - 107,617,934 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBIUU_Cfam_GSD_1.0
KASH5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381949,388,249 - 49,417,990 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1949,388,219 - 49,417,990 (+)EnsemblGRCh38hg38GRCh38
GRCh371949,891,506 - 49,921,247 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361954,583,318 - 54,613,058 (+)NCBINCBI36Build 36hg18NCBI36
Celera1946,759,093 - 46,788,876 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1946,268,082 - 46,297,866 (+)NCBIHuRef
CHM1_11949,893,262 - 49,923,194 (+)NCBICHM1_1
T2T-CHM13v2.01952,385,679 - 52,415,421 (+)NCBIT2T-CHM13v2.0
Kash5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39744,833,043 - 44,854,344 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl744,833,048 - 44,854,316 (-)EnsemblGRCm39 Ensembl
GRCm38745,183,619 - 45,204,919 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,183,624 - 45,204,892 (-)EnsemblGRCm38mm10GRCm38
MGSCv37752,439,046 - 52,460,262 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,051,718 - 45,072,934 (-)NCBIMGSCv36mm8
Celera740,639,569 - 40,660,783 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.17NCBI
Kash5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81104,805,248 - 104,827,720 (-)NCBIGRCr8
mRatBN7.2195,668,918 - 95,691,353 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl195,668,886 - 95,691,368 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01101,180,497 - 101,203,048 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,180,657 - 101,198,801 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,245,370 - 102,267,683 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4195,660,143 - 95,681,984 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera189,927,287 - 89,949,915 (-)NCBICelera
Cytogenetic Map1q22NCBI
Kash5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555591,416,844 - 1,438,451 (-)NCBIChiLan1.0ChiLan1.0
KASH5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22055,504,624 - 55,535,099 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11957,425,736 - 57,455,406 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01946,402,586 - 46,432,002 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11955,325,640 - 55,353,721 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1955,325,640 - 55,353,721 (+)Ensemblpanpan1.1panPan2
Kash5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,655,156 - 21,680,810 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366643,275,669 - 3,297,605 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366643,268,824 - 3,300,689 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KASH5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,477,058 - 54,500,887 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,476,989 - 54,501,099 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2650,205,478 - 50,230,015 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KASH5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1642,561,606 - 42,599,442 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607322,496,832 - 22,527,316 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kash5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248324,783,766 - 4,803,325 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248324,783,593 - 4,806,025 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KASH5
477 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 8
Low 14 3 3 6 10 7 2
Below cutoff 5 5 8 3 6 3 5 2 3 4

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005616313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014118902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014118904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014118907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014118909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000005911   ⟹   ENSCAFP00000005475
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1107,074,010 - 107,097,762 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845044469   ⟹   ENSCAFP00845034844
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1107,594,087 - 107,617,934 (-)Ensembl
RefSeq Acc Id: XM_005616313   ⟹   XP_005616370
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,074,010 - 107,114,460 (-)NCBI
Dog10K_Boxer_Tasha1106,657,279 - 106,681,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014118902   ⟹   XP_013974377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,074,010 - 107,114,460 (-)NCBI
Dog10K_Boxer_Tasha1106,657,279 - 106,681,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014118904   ⟹   XP_013974379
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,074,010 - 107,114,460 (-)NCBI
Dog10K_Boxer_Tasha1106,657,279 - 106,681,125 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014118907   ⟹   XP_013974382
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,074,010 - 107,114,460 (-)NCBI
Dog10K_Boxer_Tasha1106,657,279 - 106,681,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014118909   ⟹   XP_013974384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,074,010 - 107,114,460 (-)NCBI
Dog10K_Boxer_Tasha1106,657,279 - 106,681,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022423878   ⟹   XP_022279586
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,074,010 - 107,114,460 (-)NCBI
Dog10K_Boxer_Tasha1106,657,279 - 106,681,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022423885   ⟹   XP_022279593
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,074,010 - 107,095,747 (-)NCBI
Dog10K_Boxer_Tasha1106,657,279 - 106,679,017 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038467534   ⟹   XP_038323462
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBI
RefSeq Acc Id: XM_038467535   ⟹   XP_038323463
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBI
RefSeq Acc Id: XM_038467536   ⟹   XP_038323464
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,285,090 (-)NCBI
RefSeq Acc Id: XM_038467537   ⟹   XP_038323465
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBI
RefSeq Acc Id: XM_038467538   ⟹   XP_038323466
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBI
RefSeq Acc Id: XM_038467539   ⟹   XP_038323467
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBI
RefSeq Acc Id: XM_038467540   ⟹   XP_038323468
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,288,785 (-)NCBI
RefSeq Acc Id: XM_038467541   ⟹   XP_038323469
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,283,918 (-)NCBI
RefSeq Acc Id: XM_038467542   ⟹   XP_038323470
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,283,917 (-)NCBI
RefSeq Acc Id: XM_038467543   ⟹   XP_038323471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,267,073 - 107,290,886 (-)NCBI
RefSeq Acc Id: XM_038528239   ⟹   XP_038384167
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBI
RefSeq Acc Id: XM_038528240   ⟹   XP_038384168
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBI
RefSeq Acc Id: XM_038528241   ⟹   XP_038384169
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,768,326 (-)NCBI
RefSeq Acc Id: XM_038528242   ⟹   XP_038384170
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBI
RefSeq Acc Id: XM_038528243   ⟹   XP_038384171
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBI
RefSeq Acc Id: XM_038528244   ⟹   XP_038384172
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBI
RefSeq Acc Id: XM_038528245   ⟹   XP_038384173
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,772,023 (-)NCBI
RefSeq Acc Id: XM_038528246   ⟹   XP_038384174
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,767,153 (-)NCBI
RefSeq Acc Id: XM_038528247   ⟹   XP_038384175
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,767,152 (-)NCBI
RefSeq Acc Id: XM_038528248   ⟹   XP_038384176
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01107,750,294 - 107,774,134 (-)NCBI
RefSeq Acc Id: XM_038592537   ⟹   XP_038448465
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBI
RefSeq Acc Id: XM_038592538   ⟹   XP_038448466
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBI
RefSeq Acc Id: XM_038592539   ⟹   XP_038448467
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,927,632 (-)NCBI
RefSeq Acc Id: XM_038592540   ⟹   XP_038448468
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBI
RefSeq Acc Id: XM_038592541   ⟹   XP_038448469
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBI
RefSeq Acc Id: XM_038592542   ⟹   XP_038448470
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBI
RefSeq Acc Id: XM_038592543   ⟹   XP_038448471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,931,328 (-)NCBI
RefSeq Acc Id: XM_038592544   ⟹   XP_038448472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,926,459 (-)NCBI
RefSeq Acc Id: XM_038592545   ⟹   XP_038448473
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,926,458 (-)NCBI
RefSeq Acc Id: XM_038592546   ⟹   XP_038448474
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01106,909,642 - 106,933,428 (-)NCBI
RefSeq Acc Id: XM_038656324   ⟹   XP_038512252
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBI
RefSeq Acc Id: XM_038656325   ⟹   XP_038512253
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBI
RefSeq Acc Id: XM_038656327   ⟹   XP_038512255
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,612,128 (-)NCBI
RefSeq Acc Id: XM_038656328   ⟹   XP_038512256
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBI
RefSeq Acc Id: XM_038656329   ⟹   XP_038512257
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBI
RefSeq Acc Id: XM_038656330   ⟹   XP_038512258
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBI
RefSeq Acc Id: XM_038656331   ⟹   XP_038512259
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,615,826 (-)NCBI
RefSeq Acc Id: XM_038656332   ⟹   XP_038512260
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,610,955 (-)NCBI
RefSeq Acc Id: XM_038656333   ⟹   XP_038512261
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,610,954 (-)NCBI
RefSeq Acc Id: XM_038656334   ⟹   XP_038512262
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01107,594,087 - 107,617,939 (-)NCBI
RefSeq Acc Id: XM_038672958   ⟹   XP_038528886
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1106,657,279 - 106,675,320 (-)NCBI
RefSeq Acc Id: XM_038673137   ⟹   XP_038529065
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1106,657,279 - 106,674,147 (-)NCBI
RefSeq Acc Id: XM_038673214   ⟹   XP_038529142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1106,657,279 - 106,674,146 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005616370 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974377 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974379 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974382 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974384 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279586 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279593 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323462 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323463 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323464 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323465 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323466 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323467 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323468 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323470 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384167 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384168 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384169 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384170 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384171 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384172 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384173 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384174 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384175 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384176 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448465 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448466 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448467 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448468 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448470 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448472 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448473 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448474 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512252 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512253 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512255 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512256 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512257 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512258 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512259 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512260 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512261 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512262 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528886 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529065 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529142 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000005475.4
  ENSCAFP00030027011.1
  ENSCAFP00040029370.1
  ENSCAFP00845034844
  ENSCAFP00845034844.1
RefSeq Acc Id: XP_013974379   ⟸   XM_014118904
- Peptide Label: isoform X2
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013974382   ⟸   XM_014118907
- Peptide Label: isoform X4
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013974377   ⟸   XM_014118902
- Peptide Label: isoform X1
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005616370   ⟸   XM_005616313
- Peptide Label: isoform X10
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013974384   ⟸   XM_014118909
- Peptide Label: isoform X6
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279586   ⟸   XM_022423878
- Peptide Label: isoform X5
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279593   ⟸   XM_022423885
- Peptide Label: isoform X7
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000005475   ⟸   ENSCAFT00000005911
RefSeq Acc Id: XP_038323471   ⟸   XM_038467543
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038323467   ⟸   XM_038467539
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038323466   ⟸   XM_038467538
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038323465   ⟸   XM_038467537
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038323463   ⟸   XM_038467535
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323462   ⟸   XM_038467534
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038323468   ⟸   XM_038467540
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038323464   ⟸   XM_038467536
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038323469   ⟸   XM_038467541
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038323470   ⟸   XM_038467542
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038448474   ⟸   XM_038592546
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038448470   ⟸   XM_038592542
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038448469   ⟸   XM_038592541
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038448468   ⟸   XM_038592540
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038448466   ⟸   XM_038592538
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448465   ⟸   XM_038592537
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038448471   ⟸   XM_038592543
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038448467   ⟸   XM_038592539
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038448472   ⟸   XM_038592544
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038448473   ⟸   XM_038592545
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038512262   ⟸   XM_038656334
- Peptide Label: isoform X10
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512258   ⟸   XM_038656330
- Peptide Label: isoform X6
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512257   ⟸   XM_038656329
- Peptide Label: isoform X5
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512256   ⟸   XM_038656328
- Peptide Label: isoform X4
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512253   ⟸   XM_038656325
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512252   ⟸   XM_038656324
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512259   ⟸   XM_038656331
- Peptide Label: isoform X7
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512255   ⟸   XM_038656327
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NMV5 (UniProtKB/TrEMBL),   A0A8I3PP59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512260   ⟸   XM_038656332
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038512261   ⟸   XM_038656333
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038528886   ⟸   XM_038672958
- Peptide Label: isoform X3
- UniProtKB: A0A8P0N6J5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529065   ⟸   XM_038673137
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038529142   ⟸   XM_038673214
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038384176   ⟸   XM_038528248
- Peptide Label: isoform X10
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384172   ⟸   XM_038528244
- Peptide Label: isoform X6
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384171   ⟸   XM_038528243
- Peptide Label: isoform X5
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384170   ⟸   XM_038528242
- Peptide Label: isoform X4
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384168   ⟸   XM_038528240
- Peptide Label: isoform X2
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384167   ⟸   XM_038528239
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384173   ⟸   XM_038528245
- Peptide Label: isoform X7
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384169   ⟸   XM_038528241
- Peptide Label: isoform X3
- UniProtKB: A0A8C0T2P3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384174   ⟸   XM_038528246
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038384175   ⟸   XM_038528247
- Peptide Label: isoform X9
RefSeq Acc Id: ENSCAFP00845034844   ⟸   ENSCAFT00845044469

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003677 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030016783 UniProtKB/TrEMBL
  ENSCAFG00040018260 UniProtKB/TrEMBL
  ENSCAFG00845025192 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000005911.6 UniProtKB/TrEMBL
  ENSCAFT00030030962.1 UniProtKB/TrEMBL
  ENSCAFT00040033743.1 UniProtKB/TrEMBL
  ENSCAFT00845044469 ENTREZGENE
  ENSCAFT00845044469.1 UniProtKB/TrEMBL
InterPro KASH5 UniProtKB/TrEMBL
  KASH5_coiled-coil UniProtKB/TrEMBL
  KASH5_EF-hand-like_dom UniProtKB/TrEMBL
NCBI Gene CCDC155 ENTREZGENE
PANTHER PROTEIN KASH5 UniProtKB/TrEMBL
  PTHR47300 UniProtKB/TrEMBL
Pfam EF-hand_9 UniProtKB/TrEMBL
  KASH_CCD UniProtKB/TrEMBL
UniProt A0A8C0NMV5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T2P3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PP59 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0N6J5 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:38805 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-05-11 KASH5  KASH domain containing 5  CCDC155  coiled-coil domain containing 155  Symbol and/or name change 19259463 PROVISIONAL