MEI4 (meiotic double-stranded break formation protein 4)

Gene: MEI4 (meiotic double-stranded break formation protein 4) Canis lupus familiaris

Analyze

Symbol:

MEI4

Name:

meiotic double-stranded break formation protein 4

RGD ID:

12114911

Description:

INVOLVED IN homologous chromosome pairing at meiosis (ortholog); oogenesis (ortholog); spermatogenesis (ortholog); FOUND IN chromosome (inferred); lateral element (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

meiosis-specific 4 homolog; meiosis-specific protein MEI4; meiosis-specific protein MEI4-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	38,818,983 - 39,024,784 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	38,818,705 - 39,023,864 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	38,701,178 - 38,908,896 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	39,590,083 - 39,797,697 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	39,619,607 - 39,794,640 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	38,913,945 - 39,121,866 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	38,899,459 - 39,107,274 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	39,029,043 - 39,236,750 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA recombination (IEA)

homologous chromosome pairing at meiosis (IEA,ISO)

meiotic cell cycle (IEA)

meiotic DNA double-strand break formation (IEA)

oogenesis (IEA,ISO)

spermatogenesis (IEA,ISO)

Cellular Component

chromosome (IEA)

lateral element (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

MEI4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	38,818,983 - 39,024,784 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	38,818,705 - 39,023,864 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	38,701,178 - 38,908,896 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	39,590,083 - 39,797,697 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	39,619,607 - 39,794,640 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	38,913,945 - 39,121,866 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	38,899,459 - 39,107,274 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	39,029,043 - 39,236,750 (+)	NCBI		UU_Cfam_GSD_1.0

MEI4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	77,650,274 - 77,927,045 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	77,650,274 - 77,927,045 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	78,359,991 - 78,636,762 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Cytogenetic Map	6	q14.1	NCBI
HuRef	6	75,551,860 - 75,826,554 (+)	NCBI		HuRef
CHM1_1	6	78,526,704 - 78,800,804 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	78,827,553 - 79,104,425 (+)	NCBI		T2T-CHM13v2.0

Mei4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	81,745,723 - 82,088,060 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	81,745,723 - 82,088,060 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	81,863,670 - 82,206,007 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	81,863,670 - 82,206,007 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	81,757,351 - 81,921,098 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	81,660,462 - 81,824,209 (+)	NCBI		MGSCv36	mm8
Celera	9	78,957,492 - 79,120,861 (+)	NCBI		Celera
Cytogenetic Map	9	E1	NCBI
cM Map	9	44.72	NCBI

Mei4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	91,645,791 - 91,819,776 (+)	NCBI		GRCr8
mRatBN7.2	8	82,765,661 - 82,939,649 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	82,765,661 - 82,939,649 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	88,370,132 - 88,537,655 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	86,591,541 - 86,765,365 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	84,462,312 - 84,629,828 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	89,369,417 - 89,556,942 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	89,369,417 - 89,556,942 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	88,938,950 - 89,087,426 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	86,961,505 - 87,136,942 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	8	82,455,773 - 82,623,880 (+)	NCBI		Celera
Cytogenetic Map	8	q31	NCBI

Mei4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955502	5,831,658 - 6,018,521 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955502	5,835,608 - 6,017,945 (+)	NCBI	ChiLan1.0	ChiLan1.0

MEI4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	97,704,164 - 97,973,419 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	95,585,127 - 95,854,324 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	75,500,343 - 75,769,319 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	78,782,019 - 79,049,409 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	78,783,853 - 79,047,119 (+)	Ensembl	panpan1.1		panPan2

Mei4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	74,262,106 - 74,407,135 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936510	12,063,763 - 12,208,799 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936510	12,063,763 - 12,208,789 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MEI4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	88,189,903 - 88,399,137 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	88,188,920 - 88,399,072 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	99,156,253 - 99,268,602 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MEI4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	2,369,069 - 2,619,149 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	2,405,699 - 2,619,081 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	178,611,060 - 178,850,695 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mei4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624819	4,662,800 - 4,838,842 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624819	4,629,655 - 4,779,472 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MEI4
2369 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	2	21	6	6	6	6	6	9	5	10	6
Low		3	1						3	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005627549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014118115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014118116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005334209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005367934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005402283	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005435329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005435702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000004445 ⟹ ENSCAFP00000004108

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	38,818,705 - 39,023,864 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845015284 ⟹ ENSCAFP00845011868

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	39,619,607 - 39,794,640 (+)	Ensembl

RefSeq Acc Id:

XM_005627549 ⟹ XP_005627606

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	38,818,984 - 39,024,784 (+)	NCBI
Dog10K_Boxer_Tasha	12	38,701,178 - 38,908,754 (+)	NCBI

Sequence:

show sequence

CCAGCAGCCAACCGCGCGACGGGGCGCGCGGGCCGCGGGGCCTTCTGGGGCTTGTGGTCTCTGG
GCCCCGCCCCCGTTCGCCTGCCCCGAGGCTGGAAGGCAGCGCGAGCTGGGCAGCGTCCCGGGCT
CCGGGTCTGCGCCTGGCCGCGAGGGCGGGCGCTCGGGCTCCCCCGGCCCCTGGTCAAGCGCTTC
CTTCCCCGCCTGCACGGGCTCCCCGCGGAGGGCGCCCTCCCTCCTCTGCAGGAGCCCCGAAGGG
ACAAAAGCCAGGATGGATGATCAAACATGGTATTTGAGAACATCAAAGCTGGCTCTGGCCTTGG
CAATTATCCGCTCAACACCAGCAGACACAAGCAGCAGAGAATACACAGAGCACCTTGCGAAGGT
GGTGTCTGAGCAGGAGTCAACGTGGAGATCAAAAGTCCAGGTCTTGGAAGCTGAAGTTCTGCAA
TTACGCCACAAACTTCTTCTAAGCAGAATGTGTGCAGAAGTGTTTAAGAGTGGAGACCCAACTT
CCCAGTTGCAGGCTCAGGAACCTGGAAGTTCTGAAAATACATTAAGTCAGCTGGAAGATTCTGG
GTGTGATTTATCAAATGAGGAGAGAAGTGAACCTTCAGAGATGCCCCAGCATTTTGTGGAGAGC
TGCACCCCCACACCCTTTCTGCCCCTGCCCATTGTGAAAAGACATGGTGCCACTGTGGAAAATC
CTCTGTTTTCCCACATGCAATTCTTGCAACGTCTACTTGAACTGAAGAACTTGACAGAATCAGG
GAGTCTGAAAACAGACTTAAGCCACTTTGAAAATGACTTTTCCACAGTATCTGATTCTGTTTTT
CAGTTGCTGGATGGCCTGATCACTTTTTACCGTAAACCCAAATTTCCTTTTTCAAGCTTTTGGG
CAGATGCTGTTGATACTTTAGCTGGATTGATCAGTGATTGTCACTTATCTAATCATATTCTTAA
AAAGTGTTCCAAGAAGTTAGAAGAATTTGAGAAAACCCTACTACAGGTTATTTTAAGGAGCAAC
CATTTAAATCGGTTTCAGATGCAGCATTTTGTGTCTCAGAGTCTGGTAACCCTGGGAAGTTGCA
GCTTGTTGAGAAAATCTATAATATCTCTGCTTTTATCAGAAGTAAACAGCTTCACTGATGTTCT
GGCTACCATCAATCAGGTGCAAGCCAGTTATGTGACACGCTATGAAAATATTTTCTCCCTCTTC
TGGGTTCTGGAGCAGCTTCTTCAAAAGGAAACCAAAGAAGGCAACACTTCAAGTGTAGTGCATG
ATGACCAAGAAATCAAGAAATTTCTTCAAAAGCATGATGAAAATATTTCCCAACTCTCTGATGC
ATTTCCTTTATTTACTCTTTATTTATGGAGACTGGGCATTCTCTTGAACTCGTTAGAAACGGTT
GAAAGTAAATCACTTCCTTAGCAATTTACTAAATGTCAGAAGCATACTGAAGTATGAAGATCTT
CTGCTTAAAAGATTTTCAAAATTTTTTAAATGAGTGTTTAGGGACACCTGGGTGACTCAGTGGT
TGAGCATCTGCATTTGGCTCAGGGCGTGATCCCAGAGTCCTTGGGATTAAGTCCCTCATCAGGC
TCCCTGCAGGGAGCCTGCTTCTCCCTCTGTCTATATCTCTGCCTCTCTCTGTCTCTCATGAATA
AATTAAAAAATCTTTTTAAAAAAATGAGTGTTTTAAATGGATTTCTTAATATAATCATTAATTC
AGTAGTTTTAAATTGTATATAAAAGATTATGAGTCATATTTCTATACTAAAATCAGCCAGTTTC
AGTTGAGAATGTCCTTATTTCCATGTAACTGTTTTTTACCATAGTTACTCAATATAGTCTAGTT
CTATTCTCTATAATGGACCATTAATTGTCTATCTCATAAACAATATTTACATTTTAAAAGATTT
ATACATAATAGATACTAAAAGGCAATGGAAGAGATCTTAAAAGTTTTGTTGTTCATCAACACAG
TCTTTAAGTGGTTATAAATGGAATTTTTAAAACTTTTTTCTTACAGAGTTTCATTTACAGAAGA
TCATTGTCTATCTTCTTAGAGGATGACTCTTTAACATTTATAAACCTAATAGCCCTTAATTTCA
TAAAATCATATTTGTCAAGTTCTTTGAAAGTACTAATTCATCGTTTAAAATGTTTGGTTTTCAA
GTGTTTGTTTTCATTCTGTTTATCATGTGTAATACTTCTGTTATTGTTAAAATGTAGTTAAGTC
ATTTATAATTAAATCATTAAGGATATTTTTACAAATCTAGCATCTGCCCAGAAATATACTCATC
AAAAGTATATTTATACTTATTAAAAATATTAGTTAAATATTCCAA

hide sequence

RefSeq Acc Id:

XM_014118115 ⟹ XP_013973590

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	38,819,266 - 39,024,784 (+)	NCBI
Dog10K_Boxer_Tasha	12	38,701,402 - 38,908,754 (+)	NCBI

Sequence:

show sequence

CGCTGCCCAGCCTGGTCGGCGTCGCCCTCCGCCCAGGTGGCCCGGCCGTGCCTTTCCCGTGGCC
CCGGGGCTGTAGACCTGCGTTCGTGCCACTCGCACCGCCGCGTGGAGTTCCGCACACGGCTGGG
GTTTCTCTTCCCCTCATGACGTCGATCGCGCCTGCACCGGAGCTTCCGGGGCACAGGAATTCGT
GGGTGTCTGTGGTGTGTTCCACGCCTCTCAGCGTATTCAAGTCTAGCTTGACCATCAAAATAGT
TCCTGAGGCTTCGAGGAGAAGGCAGGGCCTGTGTTTAGAAGCCATTGGTGGAGTTGGCAAATCC
ATTCAGGACAAAAGCCAGGATGGATGATCAAACATGGTATTTGAGAACATCAAAGCTGGCTCTG
GCCTTGGCAATTATCCGCTCAACACCAGCAGACACAAGCAGCAGAGAATACACAGAGCACCTTG
CGAAGGTGGTGTCTGAGCAGGAGTCAACGTGGAGATCAAAAGTCCAGGTCTTGGAAGCTGAAGT
TCTGCAATTACGCCACAAACTTCTTCTAAGCAGAATGTGTGCAGAAGTGTTTAAGAGTGGAGAC
CCAACTTCCCAGTTGCAGGCTCAGGAACCTGGAAGTTCTGAAAATACATTAAGTCAGCTGGAAG
ATTCTGGGTGTGATTTATCAAATGAGGAGAGAAGTGAACCTTCAGAGATGCCCCAGCATTTTGT
GGAGAGCTGCACCCCCACACCCTTTCTGCCCCTGCCCATTGTGAAAAGACATGGTGCCACTGTG
GAAAATCCTCTGTTTTCCCACATGCAATTCTTGCAACGTCTACTTGAACTGAAGAACTTGACAG
AATCAGGGAGTCTGAAAACAGACTTAAGCCACTTTGAAAATGACTTTTCCACAGTATCTGATTC
TGTTTTTCAGTTGCTGGATGGCCTGATCACTTTTTACCGTAAACCCAAATTTCCTTTTTCAAGC
TTTTGGGCAGATGCTGTTGATACTTTAGCTGGATTGATCAGTGATTGTCACTTATCTAATCATA
TTCTTAAAAAGTGTTCCAAGAAGTTAGAAGAATTTGAGAAAACCCTACTACAGGTTATTTTAAG
GAGCAACCATTTAAATCGGTTTCAGATGCAGCATTTTGTGTCTCAGAGTCTGGTAACCCTGGGA
AGTTGCAGCTTGTTGAGAAAATCTATAATATCTCTGCTTTTATCAGAAGTAAACAGCTTCACTG
ATGTTCTGGCTACCATCAATCAGGTGCAAGCCAGTTATGTGACACGCTATGAAAATATTTTCTC
CCTCTTCTGGGTTCTGGAGCAGCTTCTTCAAAAGGAAACCAAAGAAGGCAACACTTCAAGTGTA
GTGCATGATGACCAAGAAATCAAGAAATTTCTTCAAAAGCATGATGAAAATATTTCCCAACTCT
CTGATGCATTTCCTTTATTTACTCTTTATTTATGGAGACTGGGCATTCTCTTGAACTCGTTAGA
AACGGTTGAAAGTAAATCACTTCCTTAGCAATTTACTAAATGTCAGAAGCATACTGAAGTATGA
AGATCTTCTGCTTAAAAGATTTTCAAAATTTTTTAAATGAGTGTTTAGGGACACCTGGGTGACT
CAGTGGTTGAGCATCTGCATTTGGCTCAGGGCGTGATCCCAGAGTCCTTGGGATTAAGTCCCTC
ATCAGGCTCCCTGCAGGGAGCCTGCTTCTCCCTCTGTCTATATCTCTGCCTCTCTCTGTCTCTC
ATGAATAAATTAAAAAATCTTTTTAAAAAAATGAGTGTTTTAAATGGATTTCTTAATATAATCA
TTAATTCAGTAGTTTTAAATTGTATATAAAAGATTATGAGTCATATTTCTATACTAAAATCAGC
CAGTTTCAGTTGAGAATGTCCTTATTTCCATGTAACTGTTTTTTACCATAGTTACTCAATATAG
TCTAGTTCTATTCTCTATAATGGACCATTAATTGTCTATCTCATAAACAATATTTACATTTTAA
AAGATTTATACATAATAGATACTAAAAGGCAATGGAAGAGATCTTAAAAGTTTTGTTGTTCATC
AACACAGTCTTTAAGTGGTTATAAATGGAATTTTTAAAACTTTTTTCTTACAGAGTTTCATTTA
CAGAAGATCATTGTCTATCTTCTTAGAGGATGACTCTTTAACATTTATAAACCTAATAGCCCTT
AATTTCATAAAATCATATTTGTCAAGTTCTTTGAAAGTACTAATTCATCGTTTAAAATGTTTGG
TTTTCAAGTGTTTGTTTTCATTCTGTTTATCATGTGTAATACTTCTGTTATTGTTAAAATGTAG
TTAAGTCATTTATAATTAAATCATTAAGGATATTTTTACAAATCTAGCATCTGCCCAGAAATAT
ACTCATCAAAAGTATATTTATACTTATTAAAAATATTAGTTAAATATTCCAA

hide sequence

RefSeq Acc Id:

XM_014118116 ⟹ XP_013973591

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	38,818,983 - 39,024,784 (+)	NCBI
Dog10K_Boxer_Tasha	12	38,701,178 - 38,908,754 (+)	NCBI

Sequence:

show sequence

ACCAGCAGCCAACCGCGCGACGGGGCGCGCGGGCCGCGGGGCCTTCTGGGGCTTGTGGTCTCTG
GGCCCCGCCCCCGTTCGCCTGCCCCGAGGCTGGAAGGCAGCGCGAGCTGGGCAGCGTCCCGGGC
TCCGGGTCTGCGCCTGGCCGCGAGGGCGGGCGCTCGGGCTCCCCCGGCCCCTGGTCAAGCGCTT
CCTTCCCCGCCTGCACGGGCTCCCCGCGGAGGGCGCCCTCCCTCCTCTGCAGGAGCCCCGAAGG
GACAAAAGCCAGGATGGATGATCAAACATGGTATTTGAGAACATCAAAGCTGGCTCTGGCCTTG
GCAATTATCCGCTCAACACCAGCAGACACAAGCAGCAGAGAATACACAGAGCACCTTGCGAAGG
TGGTGTCTGAGCAGGAGTCAACGTGGAGATCAAAAGTCCAGGTCTTGGAAGCTGAAGTTCTGCA
ATTACGCCACAAACTTCTTCTAAGCAGAATGTGTGCAGAAGTGTTTAAGAGTGGAGACCCAACT
TCCCAGTTGCAGGCTCAGGAACCTGGAAGTTCTGAAAATACATTAAGTCAGCTGGAAGATTCTG
GGTGTGATTTATCAAATGAGGAGAGAAGTGAACCTTCAGAGATGCCCCAGCATTTTGTGGAGAG
CTGCACCCCCACACCCTTTCTGCCCCTGCCCATTGTGAAAAGACATGGTGCCACTGTGGAAAAT
CCTCTGTTTTCCCACATGCAATTCTTGCAACGTCTACTTGAACTGAAGAACTTGACAGAATCAG
GGAGTCTGAAAACAGACTTAAGCCACTTTGAAAATGACTTTTCCACAGTATCTGATTCTGTTTT
TCAGTTGCTGGATGGCCTGATCACTTTTTACCGTAAACCCAAATTTCCTTTTTCAAGCTTTTGG
GCAGATGCTGTTGATACTTTAGCTGGATTGATCAGTGATTGTCACTTATCTAATCATATTCTTA
AAAAGTGTTCCAAGAAGTTAGAAGAATTTGAGAAAACCCTACTACAGGTTATTTTAAGGAGCAA
CCATTTAAATCGGGTGCAAGCCAGTTATGTGACACGCTATGAAAATATTTTCTCCCTCTTCTGG
GTTCTGGAGCAGCTTCTTCAAAAGGAAACCAAAGAAGGCAACACTTCAAGTGTAGTGCATGATG
ACCAAGAAATCAAGAAATTTCTTCAAAAGCATGATGAAAATATTTCCCAACTCTCTGATGCATT
TCCTTTATTTACTCTTTATTTATGGAGACTGGGCATTCTCTTGAACTCGTTAGAAACGGTTGAA
AGTAAATCACTTCCTTAGCAATTTACTAAATGTCAGAAGCATACTGAAGTATGAAGATCTTCTG
CTTAAAAGATTTTCAAAATTTTTTAAATGAGTGTTTAGGGACACCTGGGTGACTCAGTGGTTGA
GCATCTGCATTTGGCTCAGGGCGTGATCCCAGAGTCCTTGGGATTAAGTCCCTCATCAGGCTCC
CTGCAGGGAGCCTGCTTCTCCCTCTGTCTATATCTCTGCCTCTCTCTGTCTCTCATGAATAAAT
TAAAAAATCTTTTTAAAAAAATGAGTGTTTTAAATGGATTTCTTAATATAATCATTAATTCAGT
AGTTTTAAATTGTATATAAAAGATTATGAGTCATATTTCTATACTAAAATCAGCCAGTTTCAGT
TGAGAATGTCCTTATTTCCATGTAACTGTTTTTTACCATAGTTACTCAATATAGTCTAGTTCTA
TTCTCTATAATGGACCATTAATTGTCTATCTCATAAACAATATTTACATTTTAAAAGATTTATA
CATAATAGATACTAAAAGGCAATGGAAGAGATCTTAAAAGTTTTGTTGTTCATCAACACAGTCT
TTAAGTGGTTATAAATGGAATTTTTAAAACTTTTTTCTTACAGAGTTTCATTTACAGAAGATCA
TTGTCTATCTTCTTAGAGGATGACTCTTTAACATTTATAAACCTAATAGCCCTTAATTTCATAA
AATCATATTTGTCAAGTTCTTTGAAAGTACTAATTCATCGTTTAAAATGTTTGGTTTTCAAGTG
TTTGTTTTCATTCTGTTTATCATGTGTAATACTTCTGTTATTGTTAAAATGTAGTTAAGTCATT
TATAATTAAATCATTAAGGATATTTTTACAAATCTAGCATCTGCCCAGAAATATACTCATCAAA
AGTATATTTATACTTATTAAAAATATTAGTTAAATATTCCAA

hide sequence

RefSeq Acc Id:

XM_038492278 ⟹ XP_038348206

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	38,913,945 - 39,121,866 (+)	NCBI

RefSeq Acc Id:

XM_038492279 ⟹ XP_038348207

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	38,914,168 - 39,121,866 (+)	NCBI

RefSeq Acc Id:

XM_038492280 ⟹ XP_038348208

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	38,913,945 - 39,121,866 (+)	NCBI

RefSeq Acc Id:

XM_038554567 ⟹ XP_038410495

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	39,029,043 - 39,236,608 (+)	NCBI

RefSeq Acc Id:

XM_038554568 ⟹ XP_038410496

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	39,029,267 - 39,236,608 (+)	NCBI

RefSeq Acc Id:

XM_038554569 ⟹ XP_038410497

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	39,029,043 - 39,236,608 (+)	NCBI

RefSeq Acc Id:

XM_038618426 ⟹ XP_038474354

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	38,899,459 - 39,107,274 (+)	NCBI

RefSeq Acc Id:

XM_038618427 ⟹ XP_038474355

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	38,899,682 - 39,107,274 (+)	NCBI

RefSeq Acc Id:

XM_038618428 ⟹ XP_038474356

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	38,899,459 - 39,107,274 (+)	NCBI

RefSeq Acc Id:

XM_038683988 ⟹ XP_038539916

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	39,590,083 - 39,797,555 (+)	NCBI

RefSeq Acc Id:

XM_038683989 ⟹ XP_038539917

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	39,590,307 - 39,797,555 (+)	NCBI

RefSeq Acc Id:

XM_038683990 ⟹ XP_038539918

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	39,590,083 - 39,797,555 (+)	NCBI

RefSeq Acc Id:

XR_005334209

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	38,913,945 - 39,121,866 (+)	NCBI

RefSeq Acc Id:

XR_005367934

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	39,029,043 - 39,236,750 (+)	NCBI

RefSeq Acc Id:

XR_005402283

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	38,899,459 - 39,107,274 (+)	NCBI

RefSeq Acc Id:

XR_005435329

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	12	38,701,178 - 38,908,896 (+)	NCBI

RefSeq Acc Id:

XR_005435702

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	39,590,083 - 39,797,697 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005627606	(Get FASTA)	NCBI Sequence Viewer
	XP_013973590	(Get FASTA)	NCBI Sequence Viewer
	XP_013973591	(Get FASTA)	NCBI Sequence Viewer
	XP_038348206	(Get FASTA)	NCBI Sequence Viewer
	XP_038348207	(Get FASTA)	NCBI Sequence Viewer
	XP_038348208	(Get FASTA)	NCBI Sequence Viewer
	XP_038410495	(Get FASTA)	NCBI Sequence Viewer
	XP_038410496	(Get FASTA)	NCBI Sequence Viewer
	XP_038410497	(Get FASTA)	NCBI Sequence Viewer
	XP_038474354	(Get FASTA)	NCBI Sequence Viewer
	XP_038474355	(Get FASTA)	NCBI Sequence Viewer
	XP_038474356	(Get FASTA)	NCBI Sequence Viewer
	XP_038539916	(Get FASTA)	NCBI Sequence Viewer
	XP_038539917	(Get FASTA)	NCBI Sequence Viewer
	XP_038539918	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000004108.3
	ENSCAFP00030012681.1
	ENSCAFP00040035656.1
	ENSCAFP00845011868
	ENSCAFP00845011868.1

RefSeq Acc Id:	XP_005627606 ⟸ XM_005627549
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3N4E8 (UniProtKB/TrEMBL), A0A8P0N5R7 (UniProtKB/TrEMBL), A0A8C0Z4C2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDQTWYLRTSKLALALAIIRSTPADTSSREYTEHLAKVVSEQESTWRSKVQVLEAEVLQLRHK LLLSRMCAEVFKSGDPTSQLQAQEPGSSENTLSQLEDSGCDLSNEERSEPSEMPQHFVESCTPT PFLPLPIVKRHGATVENPLFSHMQFLQRLLELKNLTESGSLKTDLSHFENDFSTVSDSVFQLLD GLITFYRKPKFPFSSFWADAVDTLAGLISDCHLSNHILKKCSKKLEEFEKTLLQVILRSNHLNR FQMQHFVSQSLVTLGSCSLLRKSIISLLLSEVNSFTDVLATINQVQASYVTRYENIFSLFWVLE QLLQKETKEGNTSSVVHDDQEIKKFLQKHDENISQLSDAFPLFTLYLWRLGILLNSLETVESKS LP hide sequence

RefSeq Acc Id:	XP_013973591 ⟸ XM_014118116
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MQV7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDQTWYLRTSKLALALAIIRSTPADTSSREYTEHLAKVVSEQESTWRSKVQVLEAEVLQLRHK LLLSRMCAEVFKSGDPTSQLQAQEPGSSENTLSQLEDSGCDLSNEERSEPSEMPQHFVESCTPT PFLPLPIVKRHGATVENPLFSHMQFLQRLLELKNLTESGSLKTDLSHFENDFSTVSDSVFQLLD GLITFYRKPKFPFSSFWADAVDTLAGLISDCHLSNHILKKCSKKLEEFEKTLLQVILRSNHLNR VQASYVTRYENIFSLFWVLEQLLQKETKEGNTSSVVHDDQEIKKFLQKHDENISQLSDAFPLFT LYLWRLGILLNSLETVESKSLP hide sequence

RefSeq Acc Id:	XP_013973590 ⟸ XM_014118115
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3N4E8 (UniProtKB/TrEMBL), A0A8P0N5R7 (UniProtKB/TrEMBL), A0A8C0Z4C2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDQTWYLRTSKLALALAIIRSTPADTSSREYTEHLAKVVSEQESTWRSKVQVLEAEVLQLRHK LLLSRMCAEVFKSGDPTSQLQAQEPGSSENTLSQLEDSGCDLSNEERSEPSEMPQHFVESCTPT PFLPLPIVKRHGATVENPLFSHMQFLQRLLELKNLTESGSLKTDLSHFENDFSTVSDSVFQLLD GLITFYRKPKFPFSSFWADAVDTLAGLISDCHLSNHILKKCSKKLEEFEKTLLQVILRSNHLNR FQMQHFVSQSLVTLGSCSLLRKSIISLLLSEVNSFTDVLATINQVQASYVTRYENIFSLFWVLE QLLQKETKEGNTSSVVHDDQEIKKFLQKHDENISQLSDAFPLFTLYLWRLGILLNSLETVESKS LP hide sequence

RefSeq Acc Id:

ENSCAFP00000004108 ⟸ ENSCAFT00000004445

RefSeq Acc Id:	XP_038348206 ⟸ XM_038492278
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038348208 ⟸ XM_038492280
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038348207 ⟸ XM_038492279
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038474354 ⟸ XM_038618426
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038474356 ⟸ XM_038618428
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038474355 ⟸ XM_038618427
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038539916 ⟸ XM_038683988
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3N4E8 (UniProtKB/TrEMBL), A0A8P0N5R7 (UniProtKB/TrEMBL), A0A8C0Z4C2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038539918 ⟸ XM_038683990
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MQV7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038539917 ⟸ XM_038683989
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3N4E8 (UniProtKB/TrEMBL), A0A8P0N5R7 (UniProtKB/TrEMBL), A0A8C0Z4C2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038410495 ⟸ XM_038554567
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z4C2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038410497 ⟸ XM_038554569
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MQV7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038410496 ⟸ XM_038554568
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z4C2 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845011868 ⟸ ENSCAFT00845015284

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002782	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007924	UniProtKB/TrEMBL
	ENSCAFG00040022033	UniProtKB/TrEMBL
	ENSCAFG00845008694	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000004445.5	UniProtKB/TrEMBL
	ENSCAFT00030014538.1	UniProtKB/TrEMBL
	ENSCAFT00040040888.1	UniProtKB/TrEMBL
	ENSCAFT00845015284	ENTREZGENE
	ENSCAFT00845015284.1	UniProtKB/TrEMBL
InterPro	MEI4	UniProtKB/TrEMBL
KEGG Report	cfa:102153459	UniProtKB/TrEMBL
NCBI Gene	MEI4	ENTREZGENE
PANTHER	MEIOSIS-SPECIFIC PROTEIN MEI4	UniProtKB/TrEMBL
	PTHR28575	UniProtKB/TrEMBL
Pfam	Mei4	UniProtKB/TrEMBL
UniProt	A0A8C0MQV7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z4C2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N4E8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0N5R7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:43150	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message