RPRD2 (regulation of nuclear pre-mRNA domain containing 2)

Gene: RPRD2 (regulation of nuclear pre-mRNA domain containing 2) Canis lupus familiaris

Analyze

Symbol:

RPRD2

Name:

regulation of nuclear pre-mRNA domain containing 2

RGD ID:

12064199

Description:

ENCODES a protein that exhibits RNA polymerase II C-terminal domain binding (inferred); RNA polymerase II complex binding (inferred); INVOLVED IN mRNA 3'-end processing (inferred); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); immunodeficiency 42 (ortholog); MHC class II deficiency (ortholog); FOUND IN transcription preinitiation complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

regulation of nuclear pre-mRNA domain-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	59,587,157 - 59,676,885 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	59,587,157 - 59,672,964 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	59,033,321 - 59,122,599 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	60,602,597 - 60,691,959 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	60,602,014 - 60,691,954 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	59,433,343 - 59,522,397 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	59,516,710 - 59,606,178 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	60,244,550 - 60,333,836 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

Prostatic Neoplasms (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA 3'-end processing (IEA)

Cellular Component

transcription preinitiation complex (IEA)

Molecular Function

RNA polymerase II C-terminal domain binding (IEA)

RNA polymerase II complex binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RPRD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	59,587,157 - 59,676,885 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	59,587,157 - 59,672,964 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	59,033,321 - 59,122,599 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	60,602,597 - 60,691,959 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	60,602,014 - 60,691,954 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	59,433,343 - 59,522,397 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	59,516,710 - 59,606,178 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	60,244,550 - 60,333,836 (+)	NCBI		UU_Cfam_GSD_1.0

RPRD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	150,364,147 - 150,476,566 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	150,363,091 - 150,476,566 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	150,336,623 - 150,449,042 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	148,603,211 - 148,712,674 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	123,452,749 - 123,564,816 (+)	NCBI		Celera
Cytogenetic Map	1	q21.2	NCBI
HuRef	1	121,715,729 - 121,827,556 (+)	NCBI		HuRef
CHM1_1	1	151,732,629 - 151,844,644 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	149,489,227 - 149,601,428 (+)	NCBI		T2T-CHM13v2.0

Rprd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	95,667,183 - 95,727,034 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	95,667,653 - 95,726,175 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	95,759,871 - 95,819,744 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	95,760,341 - 95,818,863 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	95,563,796 - 95,622,876 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	95,845,278 - 95,904,358 (-)	NCBI		MGSCv36	mm8
MGSCv36	3	96,045,207 - 96,104,288 (-)	NCBI		MGSCv36	mm8
Celera	3	97,192,947 - 97,252,032 (-)	NCBI		Celera
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	41.0	NCBI

Rprd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	186,000,375 - 186,056,943 (-)	NCBI		GRCr8
mRatBN7.2	2	183,311,132 - 183,367,959 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	183,293,114 - 183,367,407 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	2	197,882,666 - 197,937,844 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	197,886,160 - 197,935,567 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	217,389,741 - 217,405,207 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	217,372,608 - 217,384,382 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	2	175,844,701 - 175,899,484 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Rprd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	324,873 - 419,347 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	321,707 - 420,626 (-)	NCBI	ChiLan1.0	ChiLan1.0

RPRD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	99,361,749 - 99,474,467 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	99,115,623 - 99,228,369 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	125,709,535 - 125,821,872 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	129,359,202 - 129,469,899 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	129,359,202 - 129,469,899 (+)	Ensembl	panpan1.1		panPan2

Rprd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	21,615,971 - 21,695,695 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	646,347 - 722,691 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	646,353 - 723,045 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPRD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	98,640,930 - 98,734,297 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	98,640,925 - 98,734,606 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	107,928,706 - 108,022,237 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RPRD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666038	12,815,110 - 12,928,300 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rprd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	18,107,317 - 18,212,239 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	18,107,235 - 18,215,996 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RPRD2
887 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			15		2				11	3	9
Low	5	5	7	6	4	6	6	6	1	5	1	6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014120654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038423057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038423058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038423059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038423060	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038423061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038423062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_540301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_855520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000018855 ⟹ ENSCAFP00000017473

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	59,587,157 - 59,672,964 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000072535 ⟹ ENSCAFP00000056728

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	59,587,157 - 59,672,964 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000076236 ⟹ ENSCAFP00000054506

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	59,587,157 - 59,672,964 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000091951 ⟹ ENSCAFP00000065021

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	59,587,157 - 59,672,964 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845030424 ⟹ ENSCAFP00845023859

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,602,014 - 60,688,853 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845030513 ⟹ ENSCAFP00845023935

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,602,086 - 60,659,878 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845030555 ⟹ ENSCAFP00845023970

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,602,539 - 60,691,954 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845030661 ⟹ ENSCAFP00845024057

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,602,591 - 60,688,855 (+)	Ensembl

RefSeq Acc Id:

XM_014120654 ⟹ XP_013976129

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	59,587,157 - 59,671,601 (+)	NCBI
Dog10K_Boxer_Tasha	17	59,033,321 - 59,117,762 (+)	NCBI

Sequence:

show sequence

ATGGCGGCCGGCGGCGGCGGAGGCAGCAGTAAGGCCTCCTCCTCGTCGGCCTCTTCGGCAGGGG
CTCTGGAGTCCTCGTTGGATCGAAAATTCCAGTCGGTAACTAACACCATGGAATCTATTCAAGG
CTTGTCGTCCTGGTGTATAGAGAACAAGAAACACCACACTACTATCGTCTACCATTGGATGAAG
TGGCTCCGGAGATCTGCCTATCCCCACCGTTTGAATCTCTTTTACCTCGCCAATGATGTCATAC
AGAACTGCAAAAGGAAAAATGCAATCATTTTTCGTGAATCATTTGCTGATGTCCTTCCTGAAGC
AGCTGCTTTAGTGAAGGATCCATCTGTCTCTAAATCTATAGAACGAATCTTCAAAATCTGGGAA
GATAGAAATGTGTACCCAGAAGAAATGATTATGGCATTGAGAGAAGCTTTGACATCCACGAATC
CAAAAGCTGCTCTCAAGTCTAAGATAGTTGCAGAATTTCGATCCCAGGCCCTCATTGAAGAACT
GTTGCTGTACAAGCGCTCAGAAGATCAGATAGAATTGAAGGAGAAACAGCTGTCAACCATGAGG
GTGGATGTGTGCAGCACAGAAACTCTCAAATGTTTAAAAGATAAGACAGGTGGAAAGAAGTTCT
CCAAAGAATTTGAAGAGGCAAGTTCCAAGCTTGAGGAATTTGTGAATGGATTAGATAAGCAGGT
GAAAAATGGGCCTTCACTAACAGAAGCATTGGAAAATGCTGGAATTTTCTATGAAGCACAGTAC
AAAGAAGTAAAAGTGGTGGCCAATGCATATAAGACCTTCGCTAATCGAGTGAACAATTTAAAGA
AAAAGCTGGATCAATTGAAGTCAACCCTTCCTGATCCTGAAGAATCACCAGTCCCTTCCCCAAG
CATGGATGCTCCTTCTCCAACTGGTTCTGAGTCTCCTTTTCAGGGAATGGGAGGTGAGGAATCC
CAATCACCAGCCATGGAGAGTGAGAAATCTGCCACACCTGAGCCTGTCACAGATAATCGTGATG
TAGAAGACATGGAACTCTCAGATGTGGAAGATGATGGGTCAAAAATCATTGTAGAGGACAGGAA
AGAAAAACCTGTGGAGAAGTCAGCTGTATCTACTTCTATACCTACAAAGCCAACAGAAAGTATC
TCAAAGGCCTCTTCATGTACCCCAGTAGCTGTGACCATGACAGCAACCCCATCTCTTCCAAAGC
CTGTGAATACTTCTCTCCTGTCCTCTTCTCCAGCATTGGCTTTGCCAAACCTGGCTAATGTGGA
TCTGGCAAAGATCAGTTCCATCCTTAGCAGCCTAACATCAGTCATGAAAAATACTGGGGTCAGT
CCTGCATCAAGACCTTCTCCAGGAACTCCAACAAGTCCCAGCAACCTCAGCAGTGGCCTGAAAA
CACCTGCACCTGCCCCAACAACATCTCACAACCCTCTGGCAAATATCCTCTCGAAGGTGGAGAT
CACCCCAGAGAGCATTCTGTCTGCTCTTTCTAAAACCCAGACACAGTCGGCCCCTGCGCTGCAA
GGCCTGTCATCTTTACTTCAGAGTGTTACTGGGAACCCAGTCCCAGCCAGTGAAGCTGCATCCC
AGAGCACTTCTGCTTCCCCTGCCAACACCACGGTCTCTAGTGTAAAAGGAAGAAATTTGCCCTC
CAATACCCAATCCTTTATTCCCAAAAGCTTCAACTATTCTCCTAATTCATCAACTTCTGAAGTC
TCTTCAACATCAGCCAGCAAGGCCTCAATTGGGCAAAGCCCAGGGCTTCCAAGCACTACTTTTA
AGCTACCATCCAACTCGATGGGGTTTACAGGAACCCACAGTGCAAACCCGGCTGCCGCACCTAC
TGAAGTTGCCATATGCCAATCTTCAGAGATCTCCAAGCCAAAGCTGGAGTCCGAGTCCACCTCT
CCAAGCCTGGAAATGAAGATCCACAACTTCTTAAAAGGTAATCCTGGTTTCAGTGGCTTAAACT
TAAACATCCCAATCCTGAGCAGCTTGGGGTCCAGTGCCCCAGCAGAAAGCCACCCCTCAGACTT
CCAACGTGGCCCTACTAGCACGTCAATCGACAACATTGATGGAACCCCTGTGCGGGATGAAAGG
AGTGGGACACCCACCCAGGATGAGATGATGGACAAGCCCACATCCAGCAGTGTAGACACCATGT
CCCTGCTTTCTAAGATCATTAGCCCTGGTTCCTCAACACCCAGCAGTACAAGATCACCACCCCC
TGGGAGAGAGGAAAGCTACCCCCGGGAACTCTCCAATTCTGTACCTACATATCGACCTTTTGGT
TTGGGCAGTGAATCACCCTATAAGCAGCCTTCTGATGGAATGGAGAGACCATCTTCCCTGATGG
ACTCTTCACAGGAAAAATTCTATCCAGATACTTCTTTCCAGGAAGATGAGGATTACCGAGATTT
TGAGTATTCAGGGCCTCCACCCTCTGCCATGATGAACCTAGAGAAGAAGCCAGCCAAGTCTATC
CTGAAGTCAAGCAAGCTTTCTGATGCCACCGAATACCAGCCAATCCTCTCCAGTTATAGCCACA
GGGCCCAAGAATTTGGGGTAAAGTCTGCCTTCCCTCCATCTGTAAGGGCCCTCCTGGACTCTAG
TGAGAACTGTGACCATCTCTCCTCTTCCCCTGGGCTATTTGGTGCCTTCAGCATAAGAGGGAGT
GAACCGGGGGCTGACCGGTCGCCATCACCGAAATACCCTTGCCGCTCCCACGGGCCACCCACCC
ACACCAGGCGTGGAGAAAGTCCTGGCCCCCACCATTTCCACCACGTCGACGATTGA

hide sequence

RefSeq Acc Id:

XM_038423057 ⟹ XP_038278985

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	60,602,597 - 60,691,959 (+)	NCBI

RefSeq Acc Id:

XM_038423058 ⟹ XP_038278986

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	60,602,597 - 60,688,484 (+)	NCBI

RefSeq Acc Id:

XM_038423059 ⟹ XP_038278987

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	60,602,597 - 60,687,273 (+)	NCBI

RefSeq Acc Id:

XM_038423060 ⟹ XP_038278988

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	60,602,597 - 60,687,121 (+)	NCBI

RefSeq Acc Id:

XM_038423061 ⟹ XP_038278989

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	60,602,597 - 60,687,273 (+)	NCBI

RefSeq Acc Id:

XM_038423062 ⟹ XP_038278990

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	60,602,597 - 60,687,121 (+)	NCBI

RefSeq Acc Id:

XM_038453376 ⟹ XP_038309304

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	17	59,033,321 - 59,117,914 (+)	NCBI

RefSeq Acc Id:

XM_038453377 ⟹ XP_038309305

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	17	59,033,321 - 59,117,914 (+)	NCBI

RefSeq Acc Id:

XM_038453378 ⟹ XP_038309306

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	17	59,033,321 - 59,117,762 (+)	NCBI

RefSeq Acc Id:

XM_038499556 ⟹ XP_038355484

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	59,433,343 - 59,522,397 (+)	NCBI

RefSeq Acc Id:

XM_038499557 ⟹ XP_038355485

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	59,433,343 - 59,518,926 (+)	NCBI

RefSeq Acc Id:

XM_038499558 ⟹ XP_038355486

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	59,433,343 - 59,517,715 (+)	NCBI

RefSeq Acc Id:

XM_038499559 ⟹ XP_038355487

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	59,433,343 - 59,517,563 (+)	NCBI

RefSeq Acc Id:

XM_038499560 ⟹ XP_038355488

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	59,433,343 - 59,517,715 (+)	NCBI

RefSeq Acc Id:

XM_038499561 ⟹ XP_038355489

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	59,433,343 - 59,517,563 (+)	NCBI

RefSeq Acc Id:

XM_038562126 ⟹ XP_038418054

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	60,244,550 - 60,333,836 (+)	NCBI

RefSeq Acc Id:

XM_038562127 ⟹ XP_038418055

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	60,244,550 - 60,330,363 (+)	NCBI

RefSeq Acc Id:

XM_038562128 ⟹ XP_038418056

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	60,244,550 - 60,329,152 (+)	NCBI

RefSeq Acc Id:

XM_038562129 ⟹ XP_038418057

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	60,244,550 - 60,329,000 (+)	NCBI

RefSeq Acc Id:

XM_038562130 ⟹ XP_038418058

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	60,244,550 - 60,329,152 (+)	NCBI

RefSeq Acc Id:

XM_038562131 ⟹ XP_038418059

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	60,244,550 - 60,329,000 (+)	NCBI

RefSeq Acc Id:

XM_038626223 ⟹ XP_038482151

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	59,516,710 - 59,606,178 (+)	NCBI

RefSeq Acc Id:

XM_038626224 ⟹ XP_038482152

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	59,516,710 - 59,602,706 (+)	NCBI

RefSeq Acc Id:

XM_038626225 ⟹ XP_038482153

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	59,516,710 - 59,601,495 (+)	NCBI

RefSeq Acc Id:

XM_038626226 ⟹ XP_038482154

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	59,516,710 - 59,601,343 (+)	NCBI

RefSeq Acc Id:

XM_038626227 ⟹ XP_038482155

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	59,516,710 - 59,601,495 (+)	NCBI

RefSeq Acc Id:

XM_038626228 ⟹ XP_038482156

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	59,516,710 - 59,601,343 (+)	NCBI

RefSeq Acc Id:

XM_540301 ⟹ XP_540301

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	59,587,157 - 59,676,885 (+)	NCBI
Dog10K_Boxer_Tasha	17	59,033,321 - 59,122,599 (+)	NCBI

Sequence:

show sequence

ATGGCGGCCGGCGGCGGCGGAGGCAGCAGTAAGGCCTCCTCCTCGTCGGCCTCTTCGGCAGGGG
CTCTGGAGTCCTCGTTGGATCGAAAATTCCAGTCGGTAACTAACACCATGGAATCTATTCAAGG
CTTGTCGTCCTGGTGTATAGAGAACAAGAAACACCACACTACTATCGTCTACCATTGGATGAAG
TGGCTCCGGAGATCTGCCTATCCCCACCGTTTGAATCTCTTTTACCTCGCCAATGATGTCATAC
AGAACTGCAAAAGGAAAAATGCAATCATTTTTCGTGAATCATTTGCTGATGTCCTTCCTGAAGC
AGCTGCTTTAGTGAAGGATCCATCTGTCTCTAAATCTATAGAACGAATCTTCAAAATCTGGGAA
GATAGAAATGTGTACCCAGAAGAAATGATTATGGCATTGAGAGAAGCTTTGAGTACCACTTTCA
AAACTCAGAAGCAGCTGAAAGAAAATCTGAACAAACAACCGAATAAGCAGTGGAAGAAATCACA
AACATCCACGAATCCAAAAGCTGCTCTCAAGTCTAAGATAGTTGCAGAATTTCGATCCCAGGCC
CTCATTGAAGAACTGTTGCTGTACAAGCGCTCAGAAGATCAGATAGAATTGAAGGAGAAACAGC
TGTCAACCATGAGGGTGGATGTGTGCAGCACAGAAACTCTCAAATGTTTAAAAGATAAGACAGG
TGGAAAGAAGTTCTCCAAAGAATTTGAAGAGGCAAGTTCCAAGCTTGAGGAATTTGTGAATGGA
TTAGATAAGCAGGTGAAAAATGGGCCTTCACTAACAGAAGCATTGGAAAATGCTGGAATTTTCT
ATGAAGCACAGTACAAAGAAGTAAAAGTGGTGGCCAATGCATATAAGACCTTCGCTAATCGAGT
GAACAATTTAAAGAAAAAGCTGGATCAATTGAAGTCAACCCTTCCTGATCCTGAAGAATCACCA
GTCCCTTCCCCAAGCATGGATGCTCCTTCTCCAACTGGTTCTGAGTCTCCTTTTCAGGGAATGG
GAGGTGAGGAATCCCAATCACCAGCCATGGAGAGTGAGAAATCTGCCACACCTGAGCCTGTCAC
AGATAATCGTGATGTAGAAGACATGGAACTCTCAGATGTGGAAGATGATGGGTCAAAAATCATT
GTAGAGGACAGGAAAGAAAAACCTGTGGAGAAGTCAGCTGTATCTACTTCTATACCTACAAAGC
CAACAGAAAGTATCTCAAAGGCCTCTTCATGTACCCCAGTAGCTGTGACCATGACAGCAACCCC
ATCTCTTCCAAAGCCTGTGAATACTTCTCTCCTGTCCTCTTCTCCAGCATTGGCTTTGCCAAAC
CTGGCTAATGTGGATCTGGCAAAGATCAGTTCCATCCTTAGCAGCCTAACATCAGTCATGAAAA
ATACTGGGGTCAGTCCTGCATCAAGACCTTCTCCAGGAACTCCAACAAGTCCCAGCAACCTCAG
CAGTGGCCTGAAAACACCTGCACCTGCCCCAACAACATCTCACAACCCTCTGGCAAATATCCTC
TCGAAGGTGGAGATCACCCCAGAGAGCATTCTGTCTGCTCTTTCTAAAACCCAGACACAGTCGG
CCCCTGCGCTGCAAGGCCTGTCATCTTTACTTCAGAGTGTTACTGGGAACCCAGTCCCAGCCAG
TGAAGCTGCATCCCAGAGCACTTCTGCTTCCCCTGCCAACACCACGGTCTCTAGTGTAAAAGGA
AGAAATTTGCCCTCCAATACCCAATCCTTTATTCCCAAAAGCTTCAACTATTCTCCTAATTCAT
CAACTTCTGAAGTCTCTTCAACATCAGCCAGCAAGGCCTCAATTGGGCAAAGCCCAGGGCTTCC
AAGCACTACTTTTAAGCTACCATCCAACTCGATGGGGTTTACAGGAACCCACAGTGCAAACCCG
GCTGCCGCACCTACTGAAGTTGCCATATGCCAATCTTCAGAGATCTCCAAGCCAAAGCTGGAGT
CCGAGTCCACCTCTCCAAGCCTGGAAATGAAGATCCACAACTTCTTAAAAGGTAATCCTGGTTT
CAGTGGCTTAAACTTAAACATCCCAATCCTGAGCAGCTTGGGGTCCAGTGCCCCAGCAGAAAGC
CACCCCTCAGACTTCCAACGTGGCCCTACTAGCACGTCAATCGACAACATTGATGGAACCCCTG
TGCGGGATGAAAGGAGTGGGACACCCACCCAGGATGAGATGATGGACAAGCCCACATCCAGCAG
TGTAGACACCATGTCCCTGCTTTCTAAGATCATTAGCCCTGGTTCCTCAACACCCAGCAGTACA
AGATCACCACCCCCTGGGAGAGAGGAAAGCTACCCCCGGGAACTCTCCAATTCTGTACCTACAT
ATCGACCTTTTGGTTTGGGCAGTGAATCACCCTATAAGCAGCCTTCTGATGGAATGGAGAGACC
ATCTTCCCTGATGGACTCTTCACAGGAAAAATTCTATCCAGATACTTCTTTCCAGGAAGATGAG
GATTACCGAGATTTTGAGTATTCAGGGCCTCCACCCTCTGCCATGATGAACCTAGAGAAGAAGC
CAGCCAAGTCTATCCTGAAGTCAAGCAAGCTTTCTGATGCCACCGAATACCAGCCAATCCTCTC
CAGTTATAGCCACAGGGCCCAAGAATTTGGGGTAAAGTCTGCCTTCCCTCCATCTGTAAGGGCC
CTCCTGGACTCTAGTGAGAACTGTGACCATCTCTCCTCTTCCCCTGGGCTATTTGGTGCCTTCA
GCATAAGAGGGAGTGAACCGGGGGCTGACCGGTCGCCATCACCGAGTAAGAATGATTCATTTTT
CACCCCTGACTCCAACCACAATAGCTTGTCTCAGTCTACCACTGGGCATCTCGGTTTGCCACAG
AAGCAGTACCCAGACCCTCCTCACCCAGTCCCACATCGTTCCCTTTTCTCTCCGCAGAATACCC
TTGCCGCTCCCACGGGCCACCCACCCACACCAGGCGTGGAGAAAGTCCTGGCCCCCACCATTTC
CACCACGTCGACGATTGAGTTTAAGAATATGCTTAAAAACGCCTCCCGAAAGCCCTCAGATGAT
AAGCATTTTGGCCAGGCCCCCAGCAAGGGCACTTCAAGTGACGGTAGCGGTCTCTCAAACCTCA
CCCAGCCCAGCTTGACAGCCACTGATCAGCAGCAACAAGAAGAGCACTACCGCATAGAAACCCG
AGTCTCGTCCTCCTGCTTAGACTTGCCTGATAGCACCGAAGAGAAGGGGGCCCCTATAGAAACC
TTGGGTTATCATAATGCAGCCAATAGGAGGATGTCAGGGGAGCCCATACAGACCGTAGAGTCCG
TCCGAGTTCCTGGGAAGGGAAATAGAGGACACGGGCGCGAGGCTTCAAGGGTGGGTTGGTTTGA
TCTGAGCACCTCAGGCAGCTCCTTTGACAATGGCCCCTCAAGTGCCTCTGAGTTGGCATCCCTT
GGGGGTGGGGGCAGCGGAGGCCTCACTGGCTTTAAAGCGGCACCATACAAGGAACGGGCATCCC
AATTTCAGGAAAGTGTCGGCAGCTTCCGTTCCAACAGTTTCAACTCAACATTTGAGCATCATCT
CCCCCCATCCCCCTTGGAACATGGGACACCCTTCCAGAGAGAGCCAGTGGGGCCGTCATCTGCC
CCACCTGCCCCTCCTAAGGATCATGGTGGTATCTTCTCTCGAGATGCACCCACTCATCTACCCA
CTGTGGATCTTTCGAATCCCTTCACAAAGGAGGCGGCCCTGGCCCATGCTGCCCCACCCCCTCC
TCCTGGAGAACACAGCGGAGTTCCTTTCCCCACCCCACCCCCTCCTCCACCCCCTGGGGAACTT
AGCAGCAGCGGTGGGAGTGGTGTTCCCTTTTCTACTCCACCTCCTCCTCCACCCCCTGTTGACC
ACTCTGGGGTTGTACCCTTCCCAGCCCCACCACTGGCAGAGCACGGAGTGGCGGGAGCTGTGGC
AGTATTTCCCAAGGACCATAGTTCCCTCCTTCAAGGGACCCTGGCTGAGCATTTTGGGGTGCTC
CCAGGACCTAGGGACCATGGGGGCCCCACCCAACGGGACCTCAACGGCCCTGGCCTTAGCCGTG
TACGAGAGAGCCTCAGCCTACCCTCCCATTCTCTGGAACACCTGGGCCCAGCCCATGGAGGAGG
AGGTGGGGGAGGCAGCAACAACAGCAGTGGCCCCCACTTGGGTCCCTCACACAGAGACGCTATC
AACCGGAGTGGTATGATTTTGCGGAATCCCCGGCCAGACTTTCGGCCTAGGGAACCTTTTCTCA
GCAGAGACCCGTTCCACAGTCTAAAGAGACCCAGGCCACCTTTTGCTAGGGGCCCTCCGTTCTT
TGCACCAAAACGCCCATTCTTCCCTCCCAGGTACTGATGGAAACCAAGGGAAAAGCATTTTGAA
CAGTCTAGAGAGCATTGGAAGTAGGAGTTTGGTTTATTGTTGTTTTTGTTTTCCTACCTTTGAT
TTTTTTTTTTTTTAATGACAAAGGGCCTCCCTTCCAAATTAAAAAGTCATACATGCTTACATTT
CACTATTCCATTCAGTCCTCCCTCCCACTGCACTTACCAACCTTCCCCAAGCTACTTGTATTTT
AAAGGGATGGGGGGCGGGCAAAGAAACACAACCAAAGCCACTTCATTGGCTGGGGGTTTGAGGG
GTGGGGGTGGGGGAACAAATCTTATTTTGCCCCATTTATTGAAGAGTATTACTACATTTGAAAT
AAAATTTCCATCAGTACAGAGAATAACATGTGCTATGTTGGGATGTTATTTTGGGCTTGGCTTA
TCAAGTAGCCAATAGAAGGATTCCTGTCCCCTTCTCTCTCCCATTAAGTAACTACTGTGACCAG
TGTGGCTCCTTTTCCTGTATGCTCTGTGCCCTGCTGACAAGCCAAAAGATGTTGCAAGGGAGGA
TAGGTGGGAAACCATAGACCTGTCAAGTTTGTTTTGTTTTTAAAGACATATTGAAATTGGATTC
TTTACCTTTCTCCTAAAATCCCAATTAAAAAAAAAAAAATCAGCCTCTTCTTCTAAAGAACCAT
CAGTGACTAACTTTGAGGAGATACAGATTTCATTCTATCCTGGTAAAAATTATTCCTCTTTATC
CTTGGAATGAAAGAGCGGTGGCTGGATATAATCTCCAGGTTAAAATAAGGTGTAACTCCAATAC
AGAGTTACAGAAAGGAACCATCAACCGTGTGATGTGACCTGCCCATCCCTCATAAATGAGAATG
GGAAACTCTGAGTTAGTTTGACATGTCTTGCACCAAGCTCTTGCTTCCTGCTTTTTTTGTTTGT
TTGTTTGTTTTTTTGCTTTTTTTTTTTTTTTTTTTGTGAATGACTTTTTCTCAGTTTTCATTTC
TGCTTTGGCCAGAAAGAAAGCCATGTAAGTTGACAACTGATACAGAGGCACAACTGAAATTATT
CTTAATTTTTTTATTAATGTAATAAGTAGACATTTTTATCATGGTGCCTCCCTAATGTGATATT
TGTTGGTGATTTTTAGCAAAGGTTAACTACTAGGGGAAAGGAACTATTGGTCTGTATCTTTCCT
CCTTGCCCTAGTCCTGGATTTACTCCTGTTCTTCGTATTTCAAAGGAGGAGGTTCAATAGCCTC
TTCCAGTGCTTTACACCTCTTTAGGTGTGTCTTAATGACAAGTGGGTATTACTATGCATATCTT
TACAGAGAACCAGGAGGGCCTGAGAAACCCAGACTACCCCATTCTACAGCTAGCAATCTGTCAC
ATTTTAAGGCTCAAGGCTTGTCCTCACCTTCCACTCCCAATAGGAAATAATGTTTCTGCCCTTA
GTCATTTTACACGAGAAGGGTGTGCTTTCCTTCTCCCCAAACAGAAAGGCTTCTTTGTATTTCT
ACAACTAAAACTGGGAAAAAAGACAATCAGTATGCTTTTAGTGTCTGTTAACTTTAAGAACACT
GAAAAGCAAAGATTGCTTTACTATTATTTTGTATTATTTACTGTCTTACCCCAGGGTATACACA
CTGGTAATCTCCAACTAGATAAATAAAACCGTATGTGGTGGGGTTTTTTAGGGAATCCTAGCAA
GTTTCATATTTTCTTCCAAGGGAGCATAGAACTAACTGTAGGAAGTATGAGGATTGTTTTGGAT
TCCTCTAGTGAAATATTTAAAGATGGGGGAGAGTGGACAATACAGCAACAGAAGATGATTCTTT
GTGTCAGAATAAACCTGGTTTCAGATAGCAGCTTAAACCAGTTGTGGGTCCTAGTTTGGGAGTT
TTTGTGTAATTTATTCCATGTTATTTATTTGGGCTTGCCATGTGTTCTGTGGTCAGGAGGCTGC
AAGTCCTTCATCTTCCTGATGGCATTTCTGGTCTTAAGTCAACTGTTCTGTCTTTGACCCTCTC
CAGCCTCTCTGCCCTTTAGCTCTCCCCACAAAAATGCATGATACCATGACTTTATGTGTGGGAT
GGGGTATATAGTGTAGCAAAGCAAAGAAACAATATAGTTATCTTGAGTCCTGAGACATTTGTTT
AGGGGAAAGTGTGATTGAGAATAAGGGTAAAGGTTGGGGGAGGGGAGGGGAGTTCTAATTGACT
CAAAACTGAAACTTTTTTTGCAGAAATTAAGTGGGATGTTTTTCATTCTAGAATAAAAGAATGT
GAATTCCTTCTGCTGCTCTTGTTTAAGCTAAAAGTAGTGTTTACTTGAAAAGGCTCTCTATTTG
ATTTTATCAGAAAATGTGGGGATGTCAGGAAAGTGGCTTCCTGAATGTTGGGGCAGGGTAATTG
TCCTCAAAAGCATGATGACTAATACATGGAAAGGAAGACCTTGTACAGTTTAAAAGATGGACTT
TAAAGGGTTGGTGTTTTTTTGCAAGGTGTTTTGTTTTTTAAGCTACAAAATCCTCATTGAGTTT
GTTTCGGGATGGAAGTGAGGATTTGTATGTGACTGTCAGCTGTTAACTTTAAGTCTGTCTACAG
CAGTAAATGAAGACGACAATGTATATATGTGATATAGTGAAACAAAAAAGACAATTCTGGTATT
CATAACATGAAACAAAGGGGTTTTATCCTTTCTGTGTCTGTGATTTAAAACTCCATGCCCATGC
TCTGACTTTTGTATTTCAACCTGAATTTAAAAATGTAATAAATAAGATTTTTTTAAAGAAAGCA
TAATATAGTGTGTCTTGGCAAGGACATGATATATATGAAAGCAGAATATGCAAAGTTGTTACTA
AGGTCCTTGGTGCTCACTGTAAAATCACAGACAGAGAATTGGTCGGGGGGTCGTGAATACACTG
GTACCACTTAAAGCTCAGTGATACTATCAGAAATCAAGTCCTTAAGTATTGTATAAGAGTTTAC
TCTTAAGTCAGCTTAGATGAGAGCCCTCTCTCCCTGCTCCCTTTTCCCCTCCCAAAAGGTGAGC
ATAAATAGAATTTGGTTTGATGCCAGGGAAGGTAAAATGATCAGAGAGTAGGACTTTGATCCTT
TCCGATCCCAGGAATACAATGTTTGTGATATATATATGGTACAGCTAACCTATCTAGATAATGT
GAATATGCTAAACTTCCTAATTGCAGAATATTCACTATCAAGCCTGAAGTTACCGGTTCATGCA
GAATTAAGCTTCAGCTGTTAATTGTTTTGAAGCCGCTGTAAATTACTGCTTTTTCCCCCTTTTC
CTCCCTTCCCCCCTTTTTTGAATGGGCGGGAATGCCTGTTAAGATTAAAATTAGATATGTTGGA
TGATACTCTCGACGTGTTCAGTGTGGAAAACAAAACAAGTACATGCTTTAGAGGCAACAACAAT
GAAATCCTTTTGAAATGTGTATTAATATCATTTAATAAAATAACTAGTTCTGAAGGTTTGACAT
TTTTCTTTGAGATTTGGGGCTTTGACCAAGGGCTCCTGGCTCCTGTGGTGAGTGCAACTAGAAC
GGAACTTCTCCGGAAGCTGAAACTGCTGCTTTGCGGAGCGGGCCTATGGTTGGAAAATTTAAAT
TTTCTACGGCAAAGACCCTACTACATGACTGTCCAGGGCTGAAGGTGAAACCAACAACAGGATG
CAGAAAGAAAGCCTGGATAGATCTCTGAAGATCTGATTGTATTAGCTTTTTGATCTAAATGCGA
GGGGTATCAAGGGGACCATGTGTGTGCCTGCACATTTCTGAGGCACACAGATACCACAGACCAC
CCTTGTCCCTTCTTTGTGACCTTGCCTCTCTTCCAGCCGTTCTTCCTTTTTTCTTTTTTATCTT
TGTCCCCAATACTATGTTTTTGTTCTCCAGTTTAATAAAGTATGGTTTCCTTTG

hide sequence

RefSeq Acc Id:

XM_855520 ⟹ XP_860613

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	59,587,157 - 59,672,964 (+)	NCBI
Dog10K_Boxer_Tasha	17	59,033,321 - 59,119,125 (+)	NCBI

Sequence:

show sequence

ATGGCGGCCGGCGGCGGCGGAGGCAGCAGTAAGGCCTCCTCCTCGTCGGCCTCTTCGGCAGGGG
CTCTGGAGTCCTCGTTGGATCGAAAATTCCAGTCGGTAACTAACACCATGGAATCTATTCAAGG
CTTGTCGTCCTGGTGTATAGAGAACAAGAAACACCACACTACTATCGTCTACCATTGGATGAAG
TGGCTCCGGAGATCTGCCTATCCCCACCGTTTGAATCTCTTTTACCTCGCCAATGATGTCATAC
AGAACTGCAAAAGGAAAAATGCAATCATTTTTCGTGAATCATTTGCTGATGTCCTTCCTGAAGC
AGCTGCTTTAGTGAAGGATCCATCTGTCTCTAAATCTATAGAACGAATCTTCAAAATCTGGGAA
GATAGAAATGTGTACCCAGAAGAAATGATTATGGCATTGAGAGAAGCTTTGACATCCACGAATC
CAAAAGCTGCTCTCAAGTCTAAGATAGTTGCAGAATTTCGATCCCAGGCCCTCATTGAAGAACT
GTTGCTGTACAAGCGCTCAGAAGATCAGATAGAATTGAAGGAGAAACAGCTGTCAACCATGAGG
GTGGATGTGTGCAGCACAGAAACTCTCAAATGTTTAAAAGATAAGACAGGTGGAAAGAAGTTCT
CCAAAGAATTTGAAGAGGCAAGTTCCAAGCTTGAGGAATTTGTGAATGGATTAGATAAGCAGGT
GAAAAATGGGCCTTCACTAACAGAAGCATTGGAAAATGCTGGAATTTTCTATGAAGCACAGTAC
AAAGAAGTAAAAGTGGTGGCCAATGCATATAAGACCTTCGCTAATCGAGTGAACAATTTAAAGA
AAAAGCTGGATCAATTGAAGTCAACCCTTCCTGATCCTGAAGAATCACCAGTCCCTTCCCCAAG
CATGGATGCTCCTTCTCCAACTGGTTCTGAGTCTCCTTTTCAGGGAATGGGAGGTGAGGAATCC
CAATCACCAGCCATGGAGAGTGAGAAATCTGCCACACCTGAGCCTGTCACAGATAATCGTGATG
TAGAAGACATGGAACTCTCAGATGTGGAAGATGATGGGTCAAAAATCATTGTAGAGGACAGGAA
AGAAAAACCTGTGGAGAAGTCAGCTGTATCTACTTCTATACCTACAAAGCCAACAGAAAGTATC
TCAAAGGCCTCTTCATGTACCCCAGTAGCTGTGACCATGACAGCAACCCCATCTCTTCCAAAGC
CTGTGAATACTTCTCTCCTGTCCTCTTCTCCAGCATTGGCTTTGCCAAACCTGGCTAATGTGGA
TCTGGCAAAGATCAGTTCCATCCTTAGCAGCCTAACATCAGTCATGAAAAATACTGGGGTCAGT
CCTGCATCAAGACCTTCTCCAGGAACTCCAACAAGTCCCAGCAACCTCAGCAGTGGCCTGAAAA
CACCTGCACCTGCCCCAACAACATCTCACAACCCTCTGGCAAATATCCTCTCGAAGGTGGAGAT
CACCCCAGAGAGCATTCTGTCTGCTCTTTCTAAAACCCAGACACAGTCGGCCCCTGCGCTGCAA
GGCCTGTCATCTTTACTTCAGAGTGTTACTGGGAACCCAGTCCCAGCCAGTGAAGCTGCATCCC
AGAGCACTTCTGCTTCCCCTGCCAACACCACGGTCTCTAGTGTAAAAGGAAGAAATTTGCCCTC
CAATACCCAATCCTTTATTCCCAAAAGCTTCAACTATTCTCCTAATTCATCAACTTCTGAAGTC
TCTTCAACATCAGCCAGCAAGGCCTCAATTGGGCAAAGCCCAGGGCTTCCAAGCACTACTTTTA
AGCTACCATCCAACTCGATGGGGTTTACAGGAACCCACAGTGCAAACCCGGCTGCCGCACCTAC
TGAAGTTGCCATATGCCAATCTTCAGAGATCTCCAAGCCAAAGCTGGAGTCCGAGTCCACCTCT
CCAAGCCTGGAAATGAAGATCCACAACTTCTTAAAAGGTAATCCTGGTTTCAGTGGCTTAAACT
TAAACATCCCAATCCTGAGCAGCTTGGGGTCCAGTGCCCCAGCAGAAAGCCACCCCTCAGACTT
CCAACGTGGCCCTACTAGCACGTCAATCGACAACATTGATGGAACCCCTGTGCGGGATGAAAGG
AGTGGGACACCCACCCAGGATGAGATGATGGACAAGCCCACATCCAGCAGTGTAGACACCATGT
CCCTGCTTTCTAAGATCATTAGCCCTGGTTCCTCAACACCCAGCAGTACAAGATCACCACCCCC
TGGGAGAGAGGAAAGCTACCCCCGGGAACTCTCCAATTCTGTACCTACATATCGACCTTTTGGT
TTGGGCAGTGAATCACCCTATAAGCAGCCTTCTGATGGAATGGAGAGACCATCTTCCCTGATGG
ACTCTTCACAGGAAAAATTCTATCCAGATACTTCTTTCCAGGAAGATGAGGATTACCGAGATTT
TGAGTATTCAGGGCCTCCACCCTCTGCCATGATGAACCTAGAGAAGAAGCCAGCCAAGTCTATC
CTGAAGTCAAGCAAGCTTTCTGATGCCACCGAATACCAGCCAATCCTCTCCAGTTATAGCCACA
GGGCCCAAGAATTTGGGGTAAAGTCTGCCTTCCCTCCATCTGTAAGGGCCCTCCTGGACTCTAG
TGAGAACTGTGACCATCTCTCCTCTTCCCCTGGGCTATTTGGTGCCTTCAGCATAAGAGGGAGT
GAACCGGGGGCTGACCGGTCGCCATCACCGAGTAAGAATGATTCATTTTTCACCCCTGACTCCA
ACCACAATAGCTTGTCTCAGTCTACCACTGGGCATCTCGGTTTGCCACAGAAGCAGTACCCAGA
CCCTCCTCACCCAGTCCCACATCGTTCCCTTTTCTCTCCGCAGAATACCCTTGCCGCTCCCACG
GGCCACCCACCCACACCAGGCGTGGAGAAAGTCCTGGCCCCCACCATTTCCACCACGTCGACGA
TTGAGTTTAAGAATATGCTTAAAAACGCCTCCCGAAAGCCCTCAGATGATAAGCATTTTGGCCA
GGCCCCCAGCAAGGGCACTTCAAGTGACGGTAGCGGTCTCTCAAACCTCACCCAGCCCAGCTTG
ACAGCCACTGATCAGCAGCAACAAGAAGAGCACTACCGCATAGAAACCCGAGTCTCGTCCTCCT
GCTTAGACTTGCCTGATAGCACCGAAGAGAAGGGGGCCCCTATAGAAACCTTGGGTTATCATAA
TGCAGCCAATAGGAGGATGTCAGGGGAGCCCATACAGACCGTAGAGTCCGTCCGAGTTCCTGGG
AAGGGAAATAGAGGACACGGGCGCGAGGCTTCAAGGGTGGGTTGGTTTGATCTGAGCACCTCAG
GCAGCTCCTTTGACAATGGCCCCTCAAGTGCCTCTGAGTTGGCATCCCTTGGGGGTGGGGGCAG
CGGAGGCCTCACTGGCTTTAAAGCGGCACCATACAAGGAACGGGCATCCCAATTTCAGGAAAGT
GTCGGCAGCTTCCGTTCCAACAGTTTCAACTCAACATTTGAGCATCATCTCCCCCCATCCCCCT
TGGAACATGGGACACCCTTCCAGAGAGAGCCAGTGGGGCCGTCATCTGCCCCACCTGCCCCTCC
TAAGGATCATGGTGGTATCTTCTCTCGAGATGCACCCACTCATCTACCCACTGTGGATCTTTCG
AATCCCTTCACAAAGGAGGCGGCCCTGGCCCATGCTGCCCCACCCCCTCCTCCTGGAGAACACA
GCGGAGTTCCTTTCCCCACCCCACCCCCTCCTCCACCCCCTGGGGAACTTAGCAGCAGCGGTGG
GAGTGGTGTTCCCTTTTCTACTCCACCTCCTCCTCCACCCCCTGTTGACCACTCTGGGGTTGTA
CCCTTCCCAGCCCCACCACTGGCAGAGCACGGAGTGGCGGGAGCTGTGGCAGTATTTCCCAAGG
ACCATAGTTCCCTCCTTCAAGGGACCCTGGCTGAGCATTTTGGGGTGCTCCCAGGACCTAGGGA
CCATGGGGGCCCCACCCAACGGGACCTCAACGGCCCTGGCCTTAGCCGTGTACGAGAGAGCCTC
AGCCTACCCTCCCATTCTCTGGAACACCTGGGCCCAGCCCATGGAGGAGGAGGTGGGGGAGGCA
GCAACAACAGCAGTGGCCCCCACTTGGGTCCCTCACACAGAGACGCTATCAACCGGAGTGGTAT
GATTTTGCGGAATCCCCGGCCAGACTTTCGGCCTAGGGAACCTTTTCTCAGCAGAGACCCGTTC
CACAGTCTAAAGAGACCCAGGCCACCTTTTGCTAGGGGCCCTCCGTTCTTTGCACCAAAACGCC
CATTCTTCCCTCCCAGGTACTGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013976129	(Get FASTA)	NCBI Sequence Viewer
	XP_038278985	(Get FASTA)	NCBI Sequence Viewer
	XP_038278986	(Get FASTA)	NCBI Sequence Viewer
	XP_038278987	(Get FASTA)	NCBI Sequence Viewer
	XP_038278988	(Get FASTA)	NCBI Sequence Viewer
	XP_038278989	(Get FASTA)	NCBI Sequence Viewer
	XP_038278990	(Get FASTA)	NCBI Sequence Viewer
	XP_038309304	(Get FASTA)	NCBI Sequence Viewer
	XP_038309305	(Get FASTA)	NCBI Sequence Viewer
	XP_038309306	(Get FASTA)	NCBI Sequence Viewer
	XP_038355484	(Get FASTA)	NCBI Sequence Viewer
	XP_038355485	(Get FASTA)	NCBI Sequence Viewer
	XP_038355486	(Get FASTA)	NCBI Sequence Viewer
	XP_038355487	(Get FASTA)	NCBI Sequence Viewer
	XP_038355488	(Get FASTA)	NCBI Sequence Viewer
	XP_038355489	(Get FASTA)	NCBI Sequence Viewer
	XP_038418054	(Get FASTA)	NCBI Sequence Viewer
	XP_038418055	(Get FASTA)	NCBI Sequence Viewer
	XP_038418056	(Get FASTA)	NCBI Sequence Viewer
	XP_038418057	(Get FASTA)	NCBI Sequence Viewer
	XP_038418058	(Get FASTA)	NCBI Sequence Viewer
	XP_038418059	(Get FASTA)	NCBI Sequence Viewer
	XP_038482151	(Get FASTA)	NCBI Sequence Viewer
	XP_038482152	(Get FASTA)	NCBI Sequence Viewer
	XP_038482153	(Get FASTA)	NCBI Sequence Viewer
	XP_038482154	(Get FASTA)	NCBI Sequence Viewer
	XP_038482155	(Get FASTA)	NCBI Sequence Viewer
	XP_038482156	(Get FASTA)	NCBI Sequence Viewer
	XP_540301	(Get FASTA)	NCBI Sequence Viewer
	XP_860613	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000017473.4
	ENSCAFP00000054506.2
	ENSCAFP00000056728.1
	ENSCAFP00000073117.1
	ENSCAFP00030009075.1
	ENSCAFP00030009138.1
	ENSCAFP00040016558.1
	ENSCAFP00040016629.1
	ENSCAFP00845023859.1
	ENSCAFP00845023935.1
	ENSCAFP00845023970
	ENSCAFP00845023970.1
	ENSCAFP00845024057
	ENSCAFP00845024057.1

RefSeq Acc Id:

XP_013976129 ⟸ XM_014120654

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAAGGGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHTTIVYHWMK
WLRRSAYPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKSIERIFKIWE
DRNVYPEEMIMALREALTSTNPKAALKSKIVAEFRSQALIEELLLYKRSEDQIELKEKQLSTMR
VDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQY
KEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESPVPSPSMDAPSPTGSESPFQGMGGEES
QSPAMESEKSATPEPVTDNRDVEDMELSDVEDDGSKIIVEDRKEKPVEKSAVSTSIPTKPTESI
SKASSCTPVAVTMTATPSLPKPVNTSLLSSSPALALPNLANVDLAKISSILSSLTSVMKNTGVS
PASRPSPGTPTSPSNLSSGLKTPAPAPTTSHNPLANILSKVEITPESILSALSKTQTQSAPALQ
GLSSLLQSVTGNPVPASEAASQSTSASPANTTVSSVKGRNLPSNTQSFIPKSFNYSPNSSTSEV
SSTSASKASIGQSPGLPSTTFKLPSNSMGFTGTHSANPAAAPTEVAICQSSEISKPKLESESTS
PSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSAPAESHPSDFQRGPTSTSIDNIDGTPVRDER
SGTPTQDEMMDKPTSSSVDTMSLLSKIISPGSSTPSSTRSPPPGREESYPRELSNSVPTYRPFG
LGSESPYKQPSDGMERPSSLMDSSQEKFYPDTSFQEDEDYRDFEYSGPPPSAMMNLEKKPAKSI
LKSSKLSDATEYQPILSSYSHRAQEFGVKSAFPPSVRALLDSSENCDHLSSSPGLFGAFSIRGS
EPGADRSPSPKYPCRSHGPPTHTRRGESPGPHHFHHVDD

hide sequence

RefSeq Acc Id:	XP_540301 ⟸ XM_540301
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MG02 (UniProtKB/TrEMBL), A0A8I3PAB0 (UniProtKB/TrEMBL), A0A8C0R4A3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAGGGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHTTIVYHWMK WLRRSAYPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKSIERIFKIWE DRNVYPEEMIMALREALSTTFKTQKQLKENLNKQPNKQWKKSQTSTNPKAALKSKIVAEFRSQA LIEELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNG LDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESP VPSPSMDAPSPTGSESPFQGMGGEESQSPAMESEKSATPEPVTDNRDVEDMELSDVEDDGSKII VEDRKEKPVEKSAVSTSIPTKPTESISKASSCTPVAVTMTATPSLPKPVNTSLLSSSPALALPN LANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPSNLSSGLKTPAPAPTTSHNPLANIL SKVEITPESILSALSKTQTQSAPALQGLSSLLQSVTGNPVPASEAASQSTSASPANTTVSSVKG RNLPSNTQSFIPKSFNYSPNSSTSEVSSTSASKASIGQSPGLPSTTFKLPSNSMGFTGTHSANP AAAPTEVAICQSSEISKPKLESESTSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSAPAES HPSDFQRGPTSTSIDNIDGTPVRDERSGTPTQDEMMDKPTSSSVDTMSLLSKIISPGSSTPSST RSPPPGREESYPRELSNSVPTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEKFYPDTSFQEDE DYRDFEYSGPPPSAMMNLEKKPAKSILKSSKLSDATEYQPILSSYSHRAQEFGVKSAFPPSVRA LLDSSENCDHLSSSPGLFGAFSIRGSEPGADRSPSPSKNDSFFTPDSNHNSLSQSTTGHLGLPQ KQYPDPPHPVPHRSLFSPQNTLAAPTGHPPTPGVEKVLAPTISTTSTIEFKNMLKNASRKPSDD KHFGQAPSKGTSSDGSGLSNLTQPSLTATDQQQQEEHYRIETRVSSSCLDLPDSTEEKGAPIET LGYHNAANRRMSGEPIQTVESVRVPGKGNRGHGREASRVGWFDLSTSGSSFDNGPSSASELASL GGGGSGGLTGFKAAPYKERASQFQESVGSFRSNSFNSTFEHHLPPSPLEHGTPFQREPVGPSSA PPAPPKDHGGIFSRDAPTHLPTVDLSNPFTKEAALAHAAPPPPPGEHSGVPFPTPPPPPPPGEL SSSGGSGVPFSTPPPPPPPVDHSGVVPFPAPPLAEHGVAGAVAVFPKDHSSLLQGTLAEHFGVL PGPRDHGGPTQRDLNGPGLSRVRESLSLPSHSLEHLGPAHGGGGGGGSNNSSGPHLGPSHRDAI NRSGMILRNPRPDFRPREPFLSRDPFHSLKRPRPPFARGPPFFAPKRPFFPPRY hide sequence

RefSeq Acc Id:	XP_860613 ⟸ XM_855520
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MB79 (UniProtKB/TrEMBL), A0A8I3S2K5 (UniProtKB/TrEMBL), A0A8C0R4A3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAGGGGGSSKASSSSASSAGALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHTTIVYHWMK WLRRSAYPHRLNLFYLANDVIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKSIERIFKIWE DRNVYPEEMIMALREALTSTNPKAALKSKIVAEFRSQALIEELLLYKRSEDQIELKEKQLSTMR VDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQY KEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESPVPSPSMDAPSPTGSESPFQGMGGEES QSPAMESEKSATPEPVTDNRDVEDMELSDVEDDGSKIIVEDRKEKPVEKSAVSTSIPTKPTESI SKASSCTPVAVTMTATPSLPKPVNTSLLSSSPALALPNLANVDLAKISSILSSLTSVMKNTGVS PASRPSPGTPTSPSNLSSGLKTPAPAPTTSHNPLANILSKVEITPESILSALSKTQTQSAPALQ GLSSLLQSVTGNPVPASEAASQSTSASPANTTVSSVKGRNLPSNTQSFIPKSFNYSPNSSTSEV SSTSASKASIGQSPGLPSTTFKLPSNSMGFTGTHSANPAAAPTEVAICQSSEISKPKLESESTS PSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSAPAESHPSDFQRGPTSTSIDNIDGTPVRDER SGTPTQDEMMDKPTSSSVDTMSLLSKIISPGSSTPSSTRSPPPGREESYPRELSNSVPTYRPFG LGSESPYKQPSDGMERPSSLMDSSQEKFYPDTSFQEDEDYRDFEYSGPPPSAMMNLEKKPAKSI LKSSKLSDATEYQPILSSYSHRAQEFGVKSAFPPSVRALLDSSENCDHLSSSPGLFGAFSIRGS EPGADRSPSPSKNDSFFTPDSNHNSLSQSTTGHLGLPQKQYPDPPHPVPHRSLFSPQNTLAAPT GHPPTPGVEKVLAPTISTTSTIEFKNMLKNASRKPSDDKHFGQAPSKGTSSDGSGLSNLTQPSL TATDQQQQEEHYRIETRVSSSCLDLPDSTEEKGAPIETLGYHNAANRRMSGEPIQTVESVRVPG KGNRGHGREASRVGWFDLSTSGSSFDNGPSSASELASLGGGGSGGLTGFKAAPYKERASQFQES VGSFRSNSFNSTFEHHLPPSPLEHGTPFQREPVGPSSAPPAPPKDHGGIFSRDAPTHLPTVDLS NPFTKEAALAHAAPPPPPGEHSGVPFPTPPPPPPPGELSSSGGSGVPFSTPPPPPPPVDHSGVV PFPAPPLAEHGVAGAVAVFPKDHSSLLQGTLAEHFGVLPGPRDHGGPTQRDLNGPGLSRVRESL SLPSHSLEHLGPAHGGGGGGGSNNSSGPHLGPSHRDAINRSGMILRNPRPDFRPREPFLSRDPF HSLKRPRPPFARGPPFFAPKRPFFPPRY hide sequence

RefSeq Acc Id:

ENSCAFP00000017473 ⟸ ENSCAFT00000018855

RefSeq Acc Id:

ENSCAFP00000065021 ⟸ ENSCAFT00000091951

RefSeq Acc Id:

ENSCAFP00000054506 ⟸ ENSCAFT00000076236

RefSeq Acc Id:

ENSCAFP00000056728 ⟸ ENSCAFT00000072535

RefSeq Acc Id:	XP_038355484 ⟸ XM_038499556
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038355485 ⟸ XM_038499557
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038355486 ⟸ XM_038499558
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038355488 ⟸ XM_038499560
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038355487 ⟸ XM_038499559
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038355489 ⟸ XM_038499561
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038482151 ⟸ XM_038626223
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038482152 ⟸ XM_038626224
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038482153 ⟸ XM_038626225
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038482155 ⟸ XM_038626227
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038482154 ⟸ XM_038626226
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038482156 ⟸ XM_038626228
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038278985 ⟸ XM_038423057
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MG02 (UniProtKB/TrEMBL), A0A8I3PAB0 (UniProtKB/TrEMBL), A0A8C0R4A3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038278986 ⟸ XM_038423058
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MB79 (UniProtKB/TrEMBL), A0A8I3S2K5 (UniProtKB/TrEMBL), A0A8C0R4A3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038278987 ⟸ XM_038423059
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038278989 ⟸ XM_038423061
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038278988 ⟸ XM_038423060
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038278990 ⟸ XM_038423062
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038309304 ⟸ XM_038453376
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038309305 ⟸ XM_038453377
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038309306 ⟸ XM_038453378
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038418054 ⟸ XM_038562126
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MG02 (UniProtKB/TrEMBL), A0A8C0R4A3 (UniProtKB/TrEMBL), A0A8I3PAB0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038418055 ⟸ XM_038562127
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MB79 (UniProtKB/TrEMBL), A0A8C0R4A3 (UniProtKB/TrEMBL), A0A8I3S2K5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038418056 ⟸ XM_038562128
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038418058 ⟸ XM_038562130
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038418057 ⟸ XM_038562129
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038418059 ⟸ XM_038562131
- Peptide Label:	isoform X6

RefSeq Acc Id:

ENSCAFP00845024057 ⟸ ENSCAFT00845030661

RefSeq Acc Id:

ENSCAFP00845023859 ⟸ ENSCAFT00845030424

RefSeq Acc Id:

ENSCAFP00845023935 ⟸ ENSCAFT00845030513

RefSeq Acc Id:

ENSCAFP00845023970 ⟸ ENSCAFT00845030555

Protein Domains

CID

Promoters

RGD ID:

13686387

Promoter ID:

EPDNEW_C4455

Type:

multiple initiation site

Name:

RPRD2_1

Description:

regulation of nuclear pre-mRNA domain containing 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	59,587,151 - 59,587,211	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000011853	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030005619	UniProtKB/TrEMBL
	ENSCAFG00040010297	UniProtKB/TrEMBL
	ENSCAFG00845017196	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000018855.4	UniProtKB/TrEMBL
	ENSCAFT00000072535.2	UniProtKB/TrEMBL
	ENSCAFT00000076236.2	UniProtKB/TrEMBL
	ENSCAFT00000103396.1	UniProtKB/TrEMBL
	ENSCAFT00030010366.1	UniProtKB/TrEMBL
	ENSCAFT00030010431.1	UniProtKB/TrEMBL
	ENSCAFT00040019081.1	UniProtKB/TrEMBL
	ENSCAFT00040019160.1	UniProtKB/TrEMBL
	ENSCAFT00845030424.1	UniProtKB/TrEMBL
	ENSCAFT00845030513.1	UniProtKB/TrEMBL
	ENSCAFT00845030555	ENTREZGENE
	ENSCAFT00845030555.1	UniProtKB/TrEMBL
	ENSCAFT00845030661	ENTREZGENE
	ENSCAFT00845030661.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.90	UniProtKB/TrEMBL
	6.10.250.2560	UniProtKB/TrEMBL
InterPro	CID_dom	UniProtKB/TrEMBL
	ENTH_VHS	UniProtKB/TrEMBL
	RPRD2_CID	UniProtKB/TrEMBL
NCBI Gene	RPRD2	ENTREZGENE
PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	UniProtKB/TrEMBL
	REGULATION OF NUCLEAR PRE-MRNA DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
Pfam	CID	UniProtKB/TrEMBL
PROSITE	CID	UniProtKB/TrEMBL
SMART	RPR	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48464	UniProtKB/TrEMBL
UniProt	A0A8C0MB79	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0MG02	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R4A3	ENTREZGENE
	A0A8I3NSP3_CANLF	UniProtKB/TrEMBL
	A0A8I3P1Y5_CANLF	UniProtKB/TrEMBL
	A0A8I3PAB0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S2K5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NDY4_CANLF	UniProtKB/TrEMBL
	A0A8P0TS17_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:45728	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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