MEOX2 (mesenchyme homeobox 2) - Rat Genome Database

Name: MEOX2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: MEOX2 (mesenchyme homeobox 2) Canis lupus familiaris

Analyze

Symbol:

MEOX2 (Ensembl: AGMO)

Name:

mesenchyme homeobox 2

RGD ID:

12058163

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); DNA-binding transcription factor activity (inferred); INVOLVED IN angiogenesis (ortholog); fibroblast proliferation (ortholog); limb development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); myocardial infarction (ortholog); FOUND IN cytoplasm (inferred); membrane (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

homeobox protein MOX-2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MEOX2 (mesenchyme homeobox 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Meox2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Meox2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Meox2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MEOX2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Meox2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MEOX2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MEOX2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Meox2 (mesenchyme homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	30,258,737 - 30,324,438 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	29,864,318 - 30,324,006 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	29,780,887 - 29,846,794 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	30,174,433 - 30,240,144 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	30,174,125 - 30,239,967 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	30,276,649 - 30,342,528 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	29,996,478 - 30,062,402 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	30,307,318 - 30,373,202 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

genetic disease (ISO)

myocardial infarction (ISO)

Myocardial Ischemia (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

angiogenesis (IEA,ISO)

fibroblast proliferation (ISO)

limb development (IEA,ISO)

lipid biosynthetic process (IEA)

myofibroblast differentiation (ISO)

negative regulation of cell migration involved in sprouting angiogenesis (IEA)

positive regulation of transcription by RNA polymerase II (IEA)

regulation of transcription by RNA polymerase II (IEA)

roof of mouth development (IEA,ISO)

skeletal muscle tissue development (IEA,ISO)

somite development (IEA)

somite specification (IEA,ISO)

Cellular Component

cytoplasm (IEA)

membrane (IEA)

nucleus (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

iron ion binding (IEA)

oxidoreductase activity (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

MEOX2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	30,258,737 - 30,324,438 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	29,864,318 - 30,324,006 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	29,780,887 - 29,846,794 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	30,174,433 - 30,240,144 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	30,174,125 - 30,239,967 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	30,276,649 - 30,342,528 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	29,996,478 - 30,062,402 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	30,307,318 - 30,373,202 (-)	NCBI		UU_Cfam_GSD_1.0

MEOX2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	15,611,212 - 15,686,683 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	15,611,212 - 15,686,683 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	15,650,837 - 15,726,308 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	15,617,362 - 15,692,833 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	15,424,076 - 15,499,534	NCBI
Celera	7	15,630,544 - 15,706,034 (-)	NCBI		Celera
Cytogenetic Map	7	p21.2	NCBI
HuRef	7	15,535,672 - 15,611,245 (-)	NCBI		HuRef
CHM1_1	7	15,650,236 - 15,725,903 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	15,744,456 - 15,819,945 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	15,703,946 - 15,779,448 (-)	NCBI

Meox2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	37,158,539 - 37,229,533 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	37,158,539 - 37,229,533 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	37,108,540 - 37,179,534 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	37,108,540 - 37,179,534 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	37,835,133 - 37,906,115 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	37,618,812 - 37,689,794 (+)	NCBI		MGSCv36	mm8
Celera	12	38,548,347 - 38,608,374 (+)	NCBI		Celera
Cytogenetic Map	12	A3	NCBI
cM Map	12	16.84	NCBI

Meox2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	59,584,025 - 59,644,722 (+)	NCBI		GRCr8
mRatBN7.2	6	53,856,760 - 53,917,467 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	53,856,758 - 53,917,467 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	54,156,909 - 54,224,375 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	54,471,799 - 54,539,259 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	53,944,436 - 54,011,867 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	56,625,768 - 56,689,195 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	56,625,650 - 56,689,238 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	66,231,865 - 66,293,008 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	55,895,760 - 55,957,066 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	55,898,885 - 55,960,192 (+)	NCBI
Celera	6	52,995,636 - 53,056,305 (+)	NCBI		Celera
Cytogenetic Map	6	q21	NCBI

Meox2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	18,924,605 - 18,988,478 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	18,924,669 - 18,988,478 (-)	NCBI	ChiLan1.0	ChiLan1.0

MEOX2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	20,447,134 - 20,522,883 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	68,769,680 - 68,847,538 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	16,268,225 - 16,343,914 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	15,598,460 - 15,673,935 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	15,598,466 - 15,673,935 (-)	Ensembl	panpan1.1		panPan2

Meox2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	74,564,415 - 74,629,128 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936546	2,239,442 - 2,304,099 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936546	2,239,442 - 2,304,099 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MEOX2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	84,943,199 - 85,010,157 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	84,945,178 - 85,009,939 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	93,770,697 - 93,771,213 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MEOX2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	42,403,474 - 42,476,469 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	42,403,741 - 42,476,453 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	62,025,173 - 62,098,121 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Meox2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	14,483,789 - 14,547,374 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624739	14,483,750 - 14,547,491 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MEOX2
593 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			6	6		6						3
Low	5	5	13				6	1	12		10	3
Below cutoff			3		6			5		8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022427424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038443430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038494704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038556988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038556989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038620922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038620923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038686616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000003797 ⟹ ENSCAFP00000003511

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	14	29,864,318 - 30,208,010 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000003805 ⟹ ENSCAFP00000003518

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	14	30,260,055 - 30,324,006 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000069911 ⟹ ENSCAFP00000063858

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	14	30,012,535 - 30,208,010 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000085418 ⟹ ENSCAFP00000059356

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	14	29,864,318 - 30,324,006 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000090353 ⟹ ENSCAFP00000052139

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	14	30,068,846 - 30,324,006 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845049649 ⟹ ENSCAFP00845038944

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	14	30,174,125 - 30,239,967 (-)	Ensembl

RefSeq Acc Id:

XM_022427424 ⟹ XP_022283132

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	14	30,258,737 - 30,324,438 (-)	NCBI
Dog10K_Boxer_Tasha	14	29,780,887 - 29,846,579 (-)	NCBI

Sequence:

show sequence

GTGCGCACGTCCAGCCGGAGATAGGAAGTGGAACTGGGAGCGCGTGGCGCAGACTGAGCGGGAG
TTTTGGAGGGAGTTTGCATGTGGTCAGCTCCGGGCTCCTGAGCCAGCCCCCAGCTCACATTACA
CTCTATTTATAACCTCTCAGAGCCGTTTCCCCCTGAACGCAGTTCTCTGGGACCACCTTCTTTT
GGCTTCAACCTCTCCTACTCTTGACATCTGAGTAGCTCGAAGGGAAGCTTCTCCAGGTCCGAGT
GTTTATATGTAAAGGAGACTGGCCGCTAGGGCTCCGGACCGGGATTATCCGAGCTCTGCAGAAA
CGGCGGGTAAAATTTGTTTGGGAGGGGGAAAACACACGGTTTCCAGTGAAAAGTGACAGAGGGT
GGTAGCGTTCGGAACCATCGTGAAGTCTTCTGCCTGGAACCTGAGACGTGCATGCTATGGAACA
CCCGCTCTTTGGCTGCCTGCGCAGCCCTCACGCCACCGCGCAAGGCTTGCACCCGTTTTCCCAG
TCCTCTCTCGCCCTCCATGGAAGATCTGACCATATGTCCTACCCCGAGCTCTCCACTTCTTCCT
CGTCTTGCATAATCGCGGGATACCCCAACGAGGAGGGCATGTTTGCCAGCCAGCATCACAGGGG
GCACCACCACCACCACCATCACCACCACCACCACCACCAGCAGCAGCAGCACCAAGCTCTGCAA
ACCAACTGGCACCTTCCGCAGATGTCCTCCCCCCCGAGCGCGGCTCGTCACAGCCTCTGCCTCC
AGCCGGATTCGGGAGGGCCCCCGGAGCTGGGGAGCAGCCCGCCGGTCCTGTGTTCCAATTCTTC
CAGCTTGGGCTCCAGCACCCCGACCGGGGCCGCGTGCGCGCCAGGAGACTACGGCCGCCAGGCG
CTGTCACCCGCGGAGGCGGAGAAGAGAAGTGGCGGCAAAAGGAAAAGTGATAGCTCAGATTCCC
AGGAAGGAAATTACAAGTCAGAAGTCAATAGCAAACCCAGGAAGGAAAGGACAGCTTTTACCAA
AGAGCAAATCAGAGAACTTGAAGCAGAATTTGCCCATCATAATTATCTGACCAGACTGAGGCGA
TATGAGATAGCAGTGAATCTGGATCTCACTGAAAGACAGGTGAAAGTCTGGTTCCAGAACAGGA
GGATGAAATGGAAGAGAGTAAAAGGAGGACAACAAGGAGCTGCTGCTCGAGAAAAGGAACTGGT
GAATGTGAAAAAAGGAACACTTCTCCCTTCAGAGCTCTCGGGGATTGGTGCAGCCACCCTCCAG
CAGACAGGGGACTCTCTAGCAAATGAAGACAGCCACGACAGTGATCACAGCTCAGAGCATGCAC
ACTTATGATACACAGAGAGGATTGGCTCCCTTCTCAGGAAAGAAATGTTGTGATGGCAAGCCTT
ACTCAAACATCGTTTACACAGAGAGAACACTAGGACAGTGATTTTTTTTAATATTATTAAATTC
AGGCATCTCCAGTCTGTTTTTCATTTTCTGATTTATAAAGGGTTTACACTAAGTGCCGCTTATG
AAAGATGCTTCCACAGTGAAGATGGAAGTGAACTTGCTTAGACTATTCCAGATGTGTTGGTCGT
GTGTGTGACAGTAAGCAGGTCTGTTTGCTTTTGCTTGCACTGAAAATTAAATTGCTATCAAGAG
CAAACTATGAGACATTTTAATTCAAGATGCCTCCAGAGTGAAGATGCAGAAGATGAACTTGCTT
TGAACATTCCTGAACATTCCAGATGTACAAGGTCATGTGTATGACAGTGGGCAGGTATTTGCTT
TTGCTTGCACTGACAATTAAATTGCTATCAAGAATAAACCAATGAAACATTTTATCCTGAATAG
CCACAGTGCCTGAAATCACTCTTAAGTGGATAAAAAATGTATTTTAACTCTGTATATATTACCC
TTAAGTCATTTTCCTGTCTTCACTAAGTTTAGCGATGCATTCATATTAGCTGATGAAAACAGGC
ACTCACGATGACAACCAGAACCAGCTTCCTGTCTGTTTATACACTTTGTCATCCCAGAAACAAT
CAGCACGTGCTTACTTGTGTTCAAGTAGAGAAAAATACATTAGAGTCTGATAGGACATATTCTT
GTACCACAGACAAAACAAATCTTATGTTGCATTTTCTATCAACTGCTGCTAATATGTTATTATA
AAACTTACCTAGCTCCTCAATTCTTCCTATCTTATAGCTTGACAAAAAATTTAGGATCATAGGC
AAATCAGTTAACTTACAGAAAGAGCTTTGTATGACAGACTTTGTCTGATTTTGTTTCTTTAAAA
TGCTAGCTGTTATATGATTTAATTAACACGAAAAAGGTATCCCCTTGATTGGTATTGGCATTAG
ACAAGTTGCAAAGAAAAATTGATTCCTCACGTTGGTAGAAGATAAAATTCTGAATGTCTTCAAA
TGAGATTCAGTAAAAACATTATTTTTTCATATATGATGTATTCATGCAGAACAACAATCTTTGT
ATTTTGTAAAAAAAAAAAAAAGGTGTTTAATAAATGATCCTTTGTAAATAATTTTGGTCTCCCT
ACTGTGATTTCCTAAATTTTTACACGTTTTAATGTAAATACTTAAAGTCCCAAATTCATCTGCA
CTTATGTATATCCAGATGATCGTAATAAATGAATCATCTATATTTT

hide sequence

RefSeq Acc Id:

XM_038443430 ⟹ XP_038299358

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	14	29,780,887 - 29,846,794 (-)	NCBI

RefSeq Acc Id:

XM_038494704 ⟹ XP_038350632

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	14	30,276,649 - 30,342,528 (-)	NCBI

RefSeq Acc Id:

XM_038556988 ⟹ XP_038412916

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	14	30,307,318 - 30,372,639 (-)	NCBI

RefSeq Acc Id:

XM_038556989 ⟹ XP_038412917

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	14	30,307,318 - 30,373,202 (-)	NCBI

RefSeq Acc Id:

XM_038620922 ⟹ XP_038476850

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	14	29,996,478 - 30,062,181 (-)	NCBI

RefSeq Acc Id:

XM_038620923 ⟹ XP_038476851

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	14	29,996,478 - 30,062,402 (-)	NCBI

RefSeq Acc Id:

XM_038686616 ⟹ XP_038542544

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	14	30,174,433 - 30,240,144 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022283132	(Get FASTA)	NCBI Sequence Viewer
	XP_038299358	(Get FASTA)	NCBI Sequence Viewer
	XP_038350632	(Get FASTA)	NCBI Sequence Viewer
	XP_038412916	(Get FASTA)	NCBI Sequence Viewer
	XP_038412917	(Get FASTA)	NCBI Sequence Viewer
	XP_038476850	(Get FASTA)	NCBI Sequence Viewer
	XP_038476851	(Get FASTA)	NCBI Sequence Viewer
	XP_038542544	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000003511.5
	ENSCAFP00000003518.4
	ENSCAFP00000059356.2
	ENSCAFP00000072406.1
	ENSCAFP00030032343.1
	ENSCAFP00030032391.1
	ENSCAFP00040032166.1
	ENSCAFP00040032375.1
	ENSCAFP00845038944
	ENSCAFP00845038944.1

RefSeq Acc Id:

XP_022283132 ⟸ XM_022427424

- UniProtKB:

A0A8C0QTH2 (UniProtKB/TrEMBL), A0A8C0T8I4 (UniProtKB/TrEMBL), A0A8I3PZ60 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEHPLFGCLRSPHATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMFASQH
HRGHHHHHHHHHHHHQQQQHQALQTNWHLPQMSSPPSAARHSLCLQPDSGGPPELGSSPPVLCS
NSSSLGSSTPTGAACAPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERTA
FTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK
ELVNVKKGTLLPSELSGIGAATLQQTGDSLANEDSHDSDHSSEHAHL

hide sequence

RefSeq Acc Id:

ENSCAFP00000063858 ⟸ ENSCAFT00000069911

RefSeq Acc Id:

ENSCAFP00000003518 ⟸ ENSCAFT00000003805

RefSeq Acc Id:

ENSCAFP00000003511 ⟸ ENSCAFT00000003797

RefSeq Acc Id:

ENSCAFP00000052139 ⟸ ENSCAFT00000090353

RefSeq Acc Id:

ENSCAFP00000059356 ⟸ ENSCAFT00000085418

RefSeq Acc Id:

XP_038350632 ⟸ XM_038494704

RefSeq Acc Id:

XP_038476851 ⟸ XM_038620923

RefSeq Acc Id:

XP_038476850 ⟸ XM_038620922

RefSeq Acc Id:	XP_038542544 ⟸ XM_038686616
- UniProtKB:	A0A8C0QTH2 (UniProtKB/TrEMBL), A0A8C0T8I4 (UniProtKB/TrEMBL), A0A8I3PZ60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038299358 ⟸ XM_038443430
- UniProtKB:	A0A8C0QTH2 (UniProtKB/TrEMBL), A0A8C0T8I4 (UniProtKB/TrEMBL), A0A8I3PZ60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038412917 ⟸ XM_038556989
- UniProtKB:	A0A8C0QTH2 (UniProtKB/TrEMBL), A0A8C0T8I4 (UniProtKB/TrEMBL), A0A8I3PZ60 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038412916 ⟸ XM_038556988
- UniProtKB:	A0A8C0QTH2 (UniProtKB/TrEMBL), A0A8C0T8I4 (UniProtKB/TrEMBL), A0A8I3PZ60 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845038944 ⟸ ENSCAFT00845049649

Protein Domains

Fatty acid hydroxylase Homeobox

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002414	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00000056375	UniProtKB/TrEMBL
	ENSCAFG00030020201	UniProtKB/TrEMBL
	ENSCAFG00040019894	UniProtKB/TrEMBL
	ENSCAFG00845028133	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000003797.5	UniProtKB/TrEMBL
	ENSCAFT00000003805.6	UniProtKB/TrEMBL
	ENSCAFT00000085418.2	UniProtKB/TrEMBL
	ENSCAFT00000106480.1	UniProtKB/TrEMBL
	ENSCAFT00030037078.1	UniProtKB/TrEMBL
	ENSCAFT00030037136.1	UniProtKB/TrEMBL
	ENSCAFT00040036931.1	UniProtKB/TrEMBL
	ENSCAFT00040037161.1	UniProtKB/TrEMBL
	ENSCAFT00845049649	ENTREZGENE
	ENSCAFT00845049649.1	UniProtKB/TrEMBL
Gene3D-CATH	Homeodomain-like	UniProtKB/TrEMBL
InterPro	Fatty_acid_hydroxylase	UniProtKB/TrEMBL
	Homeobox-like_sf	UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/TrEMBL
	Homeobox_dom	UniProtKB/TrEMBL
	Homeobox_metazoa	UniProtKB/TrEMBL
	MOX-1/MOX-2	UniProtKB/TrEMBL
NCBI Gene	MEOX2	ENTREZGENE
PANTHER	ALKYLGLYCEROL MONOOXYGENASE	UniProtKB/TrEMBL
	HOMEOBOX PROTEIN MOX-2	UniProtKB/TrEMBL
	PTHR24328	UniProtKB/TrEMBL
	STEROL DESATURASE-RELATED PROTEIN	UniProtKB/TrEMBL
Pfam	FA_hydroxylase	UniProtKB/TrEMBL
	Homeodomain	UniProtKB/TrEMBL
PRINTS	HOMEOBOX	UniProtKB/TrEMBL
PROSITE	HOMEOBOX_1	UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/TrEMBL
SMART	HOX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46689	UniProtKB/TrEMBL
UniProt	A0A8C0NZ36_CANLF	UniProtKB/TrEMBL
	A0A8C0QTH2	ENTREZGENE
	A0A8C0T7P7_CANLF	UniProtKB/TrEMBL
	A0A8C0T8I4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PZ60	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0N5G6_CANLF	UniProtKB/TrEMBL
	A0A8P0PMR0_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:43158	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD