PDZD7 (PDZ domain containing 7) - Rat Genome Database

Name: PDZD7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: PDZD7 (PDZ domain containing 7) Pan paniscus

Analyze

Symbol:

PDZD7

Name:

PDZ domain containing 7

RGD ID:

12039353

Description:

ENCODES a protein that exhibits identical protein binding (inferred); INVOLVED IN auditory receptor cell development (ortholog); auditory receptor cell stereocilium organization (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 57 (ortholog); genetic disease (ortholog); FOUND IN cell projection (inferred); cilium (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

PDZ domain-containing protein 7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PDZD7 (PDZ domain containing 7)	NCBI	Ortholog
Mus musculus (house mouse):	Pdzd7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Pdzd7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pdzd7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PDZD7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pdzd7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PDZD7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PDZD7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pdzd7 (PDZ domain containing 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	112,892,689 - 112,916,290 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	112,898,067 - 112,921,923 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	97,608,969 - 97,632,508 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	101,085,130 - 101,107,949 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	101,085,370 - 101,107,034 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive nonsyndromic deafness (ISO)

autosomal recessive nonsyndromic deafness 57 (ISO)

genetic disease (ISO)

Hearing Loss (ISO)

nonsyndromic deafness (ISO)

Usher syndrome (ISO)

Usher syndrome type 2A (ISO)

Usher syndrome type 2C (ISO)

Usher Syndrome, Type 2B (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

auditory receptor cell development (IEA,ISO)

auditory receptor cell stereocilium organization (IEA,ISO)

detection of mechanical stimulus involved in sensory perception of sound (IEA,ISO)

establishment of localization in cell (IEA,ISO)

establishment of protein localization (IEA,ISO)

sensory perception of sound (IEA)

Cellular Component

cell projection (IEA)

cilium (IEA)

nucleoplasm (IEA)

nucleus (IEA)

plasma membrane (IEA)

stereocilia ankle link (IEA)

stereocilia ankle link complex (IEA)

stereocilium (IEA)

stereocilium tip (IEA)

USH2 complex (IEA)

Molecular Function

identical protein binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PDZD7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	112,892,689 - 112,916,290 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	112,898,067 - 112,921,923 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	97,608,969 - 97,632,508 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	101,085,130 - 101,107,949 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	101,085,370 - 101,107,034 (-)	Ensembl	panpan1.1		panPan2

PDZD7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	101,007,679 - 101,031,129 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	101,007,679 - 101,032,295 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	102,767,436 - 102,790,886 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	102,767,079 - 102,780,869 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	102,767,078 - 102,780,869	NCBI
Celera	10	96,514,823 - 96,528,615 (-)	NCBI		Celera
Cytogenetic Map	10	q24.31	NCBI
HuRef	10	96,396,919 - 96,420,430 (-)	NCBI		HuRef
CHM1_1	10	103,051,644 - 103,075,147 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	101,891,054 - 101,914,544 (-)	NCBI		T2T-CHM13v2.0

Pdzd7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	45,015,346 - 45,048,273 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	45,015,345 - 45,034,156 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	45,026,907 - 45,058,633 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	45,026,906 - 45,045,717 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	45,102,105 - 45,120,133 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	45,101,396 - 45,104,505 (-)	NCBI		MGSCv36	mm8
Celera	19	45,798,091 - 45,816,495 (-)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	38.23	NCBI

Pdzd7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	253,837,454 - 253,856,919 (-)	NCBI		GRCr8
mRatBN7.2	1	243,888,295 - 243,907,778 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	243,888,281 - 243,906,839 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	252,035,977 - 252,054,484 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	258,733,851 - 258,752,361 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	251,386,005 - 251,404,547 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	264,776,393 - 264,796,206 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	264,776,398 - 264,794,938 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	272,218,787 - 272,238,206 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	250,093,286 - 250,111,651 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	250,354,390 - 250,355,498 (-)	NCBI
Celera	1	239,699,429 - 239,717,953 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

Pdzd7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955485	9,166,745 - 9,182,427 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955485	9,166,721 - 9,183,129 (+)	NCBI	ChiLan1.0	ChiLan1.0

PDZD7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	13,693,032 - 13,711,654 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	13,693,023 - 13,711,784 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	13,862,474 - 13,881,114 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	14,161,075 - 14,179,725 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	14,161,062 - 14,179,677 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	13,706,822 - 13,725,459 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	13,748,113 - 13,766,748 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	13,880,087 - 13,898,731 (-)	NCBI		UU_Cfam_GSD_1.0

Pdzd7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	33,056,355 - 33,075,713 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936600	4,661,332 - 4,678,107 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936600	4,660,211 - 4,678,911 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PDZD7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	14	112,088,332 - 112,111,348 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	121,676,356 - 121,680,619 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PDZD7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	94,026,036 - 94,049,043 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	55,077,754 - 55,100,763 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pdzd7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624831	608,970 - 624,617 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624831	608,270 - 624,679 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008950815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034931313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057298978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057298981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057298982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057298983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057298984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063607514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063607515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_008954550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_008954551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_008954552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_008954554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000050664 ⟹ ENSPPAP00000027821

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	10	101,085,370 - 101,107,034 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000050667 ⟹ ENSPPAP00000027824

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	10	101,094,506 - 101,107,034 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000050673 ⟹ ENSPPAP00000027830

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	10	101,094,669 - 101,107,034 (-)	Ensembl

RefSeq Acc Id:

XM_008950815 ⟹ XP_008949063

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,892,689 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,898,067 - 112,921,923 (-)	NCBI
Mhudiblu_PPA_v0	10	97,608,969 - 97,632,506 (-)	NCBI
PanPan1.1	10	101,085,130 - 101,107,949 (-)	NCBI

Sequence:

show sequence

GCAGCAGTAGCTCTCGCCTGCGGGTGGTTTGACGAGGCTGGCGGCGCCACACCAGCGACCAGGC
CTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCC
CGCACAGAGGCTCATGGAACTCGAAGTACGCAGGGCTGGCCTCTCCAGAGCTAGCAGATTCCTT
CTGGACCTGTAGGGTGCCGCCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGA
CCCACTGGGCCTAGGAGACCTGAGCTCCGGCTCTCTGAGCTCCCTCTCCTCCCGAGCCCACCTA
GGCAGCGACTCAGGCTCCACTGCAACGCGATACCTGCTAAGGAAGCAGCAACGGCTGCTGAACG
GGCCCCCCNGCGGAATCCGAGCCTCATCGCCCATGGGACGCGTCATCCTCATCAACTCCCCCAT
CGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAGCAGGG
AGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTTCGTCAGCAAAGTGG
AGGAAGGCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGG
GCTGAGCCTGGAAAGCACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTG
CACATGATGGTTCGGCGCATGGGCCGTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGT
GGGTGGATGTGGTGAATCGGCGCCTGGTAGTGGAGAAGTGTGGTTCAACACCCTCCGACACCAG
CTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTCCGACGACTTCTGCCTGGGC
TTCAACATCCGTGGGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAGTGGACCATGGTG
GGCTGGCTGAGGAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTT
TGACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACC
ATCAAGGAGACCGGCCGGTATCCTGCCTACAAGGAGATGGTTTCTGAGTACTGCTGGCTGGACC
GACTGAGCAACGGGGTGCTGCAGCAGCTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTC
GTGCGCCTCCAGCGCCCCCTATAGCTCGGGCTCCCTGCCGTCGGACCGCATGGACATCTGCCTC
GGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCGGGCGGACACAGCCATGCAGACGG
AGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAGTCATCCTCAGGGA
CACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAGTCT
CCCAAGACGGCTTTGCTGCTGGCCCTCAGCCGACCCCGGCCCCCCATCACGCGCTCCCAGAGCT
ATCTGACCTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGAGAAGTCGGGGTCCCCTGGGGAGAA
GGGTGCCCTGCAGCGCTCCAAGACGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGGGAGG
CTAGCGCGAGACGGGCGCAGAGAGGCCTGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACC
CTCGCCTGGACATAGAGAAAGCAGGGGGCGTGGGCCCGGTGCCGAAGTTTGTCACCTGGAGACT
GAGACGCGACCGGGAGAGGGGCCGGGCCCTGCTGTCTGCCAGGTCTGGGAGTCCCTCCAGCCAG
CTGCCTAATGTGGATGAGCAGGTTCAGGCCTGGGAGAGCCGGCGGCCCCTCATTCAGGACCTGG
CCCAGAGGCTGCTGACTGATGACGAGGTGCTGGCTGTCACCCGCCACTGCTCCCGGTATGTGCA
CGAGGGAGGCATAGAGGACCTGGTGAGGCCCCTGTTGGCCATCCTCGACAGGCCGGAGAAGCTG
CTGCTGCTGCGGGACATCAGGAGTGTGGTGGCCCCCACAGACCTGGGCCGCTTCGACAGCATGG
TGATGCCTGTGGAGCTGGAGGCTTTCGAGGCCCTCAAGAGCAGGGCAGTCCGGCCTCCTGCTTT
GAGACCAGCCCGGCAGGACACGCCACCCAAGCGTCACCTTATCACCCCCGTGCCTGACAGCCGC
GGAGGCTTCTACCTGCTGCCGGTGAACGGCTTCCCGGAGGAGGAAGATGATGGGGAGCTGAGGA
AGCGGCTGGGGGCCTTCAAGGTCTCCCCAAGTGCCTCTGCCCCTCGCCACCCCCATAAAGGGAT
CCCCCCTCTCCAAGACGTGCCAGTAGATGCCTTCACCCCCCTCCGAATTGCCTGCACACCCCCT
CCCCAGCTACCACCCGTGGCTCCCGGGTCCCTGAGGCCTAACTGGCTGCTGACAGAACCCCTGA
GCCGAGAGCACCCTCCGCAGAGCCAGATCCGGGGCCGGGCTCAGAGCCGCAGCCGCAGCCGTAG
CCGCAGCCGCAGCCGCAGCCGCAGCAGCCTGGGTCAAGGCAAGTCTCCAGGTAGACGCTCCCCA
TCCCCGGTGCCTACCCCTGCCCCCAGCATGGCCAGTGGGCGCTACCACAAGCCTCGGAAGGCCA
GACCCCCTCTGCCACGACCTCTGGATGGGGAGGCAGCCAAGGTGGGGTCCAAGCAAGGGCCCTC
GGAGAATGGAACTGAGGGGACGGCCGAGGAGGCAGCCATGAAGACCCCCAGTGGCGAGCTGAAG
ACAGTGACACTGTCCAAGATGAAGCAGTCCTTAGGTATCAGCATTTCTGGGGGCATTGAGTCCA
AGGTGCAGCCCATGGTGAAGATAGAGAAGATCTTCCCTGGGGGGGCCGCTTTCCTCAGTGGGGC
CCTGCAGGCTGGCTTCGAGCTTGTGGCAGTGGACGGAGAGAATCTGGAGCAGGTGACCCACCAG
CGTGCAGTAGACACCATCCGTCGGGCTTATCGAAACAAGGCCCGGGAGCCCATGGAGCTTGTGG
TCAGGGTCCCCGGGCCCAGCCCACGGCCCTCACCCTCTGACTCATCAGCCCTTACTGATGGGGG
CCTTCCTGCTGACCACTTGCCTGCCCACCAACCCCTTGATGCTGCTCCAGTTCCTGCCCACTGG
CTCCCAGAACCTCCCACCAATCCCCAGACTCCTCCCACTGATGCCAGGCTCCTCCAGCCGACTC
CCAGCCCAGCCCCCTCCCCAGCCCTCCAGACTCCTGATTCTAAGCCTGCACCCTCCCCACGCAT
CCCATGACCCTCCCCCTAACCTCAGATTCACCCACTGACTCCAGCATCCCGTTATCCCCAGGAC
CTCTCCTACCAACTTCTTCAGGACTCTCCAGCTCCTGCCCACCCTGCCTCCTCCCAGTGCCACA
CTGGTGCCTCACATCTTTCCACTTTCTTCCCTCCTCAGCTGTCATTAAGGCTCTGCCTTAGTGT
CCAAGGACAAGGTGCTAGTGGGCAGCCTGTGTCACCTGCACTCACTGCTCCCCAA

hide sequence

RefSeq Acc Id:

XM_034931306 ⟹ XP_034787197

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,892,689 - 112,916,279 (-)	NCBI
NHGRI_mPanPan1	10	112,898,067 - 112,921,923 (-)	NCBI
Mhudiblu_PPA_v0	10	97,608,969 - 97,632,497 (-)	NCBI

RefSeq Acc Id:

XM_034931307 ⟹ XP_034787198

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,892,689 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,898,067 - 112,921,923 (-)	NCBI
Mhudiblu_PPA_v0	10	97,608,969 - 97,632,506 (-)	NCBI

RefSeq Acc Id:

XM_034931310 ⟹ XP_034787201

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,892,689 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,898,067 - 112,921,923 (-)	NCBI
Mhudiblu_PPA_v0	10	97,608,969 - 97,632,506 (-)	NCBI

RefSeq Acc Id:

XM_034931311 ⟹ XP_034787202

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,892,689 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,898,067 - 112,921,923 (-)	NCBI
Mhudiblu_PPA_v0	10	97,608,969 - 97,632,506 (-)	NCBI

RefSeq Acc Id:

XM_034931313 ⟹ XP_034787204

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,902,435 - 112,916,288 (-)	NCBI
NHGRI_mPanPan1	10	112,907,204 - 112,921,923 (-)	NCBI
Mhudiblu_PPA_v0	10	97,618,654 - 97,632,506 (-)	NCBI

RefSeq Acc Id:

XM_057298978 ⟹ XP_057154961

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,895,787 - 112,916,290 (-)	NCBI
NHGRI_mPanPan1	10	112,901,101 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XM_057298981 ⟹ XP_057154964

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,902,435 - 112,916,288 (-)	NCBI
NHGRI_mPanPan1	10	112,907,204 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XM_057298982 ⟹ XP_057154965

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,897,260 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,902,580 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XM_057298983 ⟹ XP_057154966

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,897,260 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,902,580 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XM_057298984 ⟹ XP_057154967

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,897,260 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,902,580 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XM_063607514 ⟹ XP_063463584

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,895,813 - 112,916,289 (-)	NCBI

RefSeq Acc Id:

XM_063607515 ⟹ XP_063463585

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,895,756 - 112,916,289 (-)	NCBI

RefSeq Acc Id:

XR_008954550

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,900,822 - 112,916,288 (-)	NCBI
NHGRI_mPanPan1	10	112,906,142 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XR_008954551

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,900,823 - 112,916,288 (-)	NCBI
NHGRI_mPanPan1	10	112,906,143 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XR_008954552

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,900,774 - 112,916,288 (-)	NCBI
NHGRI_mPanPan1	10	112,906,082 - 112,921,923 (-)	NCBI

RefSeq Acc Id:

XR_008954554

Type:

NON-CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	8	112,900,812 - 112,916,289 (-)	NCBI
NHGRI_mPanPan1	10	112,906,122 - 112,921,923 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008949063	(Get FASTA)	NCBI Sequence Viewer
	XP_034787197	(Get FASTA)	NCBI Sequence Viewer
	XP_034787198	(Get FASTA)	NCBI Sequence Viewer
	XP_034787201	(Get FASTA)	NCBI Sequence Viewer
	XP_034787202	(Get FASTA)	NCBI Sequence Viewer
	XP_034787204	(Get FASTA)	NCBI Sequence Viewer
	XP_057154961	(Get FASTA)	NCBI Sequence Viewer
	XP_057154964	(Get FASTA)	NCBI Sequence Viewer
	XP_057154965	(Get FASTA)	NCBI Sequence Viewer
	XP_057154966	(Get FASTA)	NCBI Sequence Viewer
	XP_057154967	(Get FASTA)	NCBI Sequence Viewer
	XP_063463584	(Get FASTA)	NCBI Sequence Viewer
	XP_063463585	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000027821.1
	ENSPPAP00000027824.1
	ENSPPAP00000027830.1

RefSeq Acc Id:

XP_008949063 ⟸ XM_008950815

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAQGFAVGFDPLGLGDLSSGSLSSLSSRAHLGSDSGSTATRYLLRKQQRLLNGPPXGIRASSPM
GRVILINSPIEANSDESDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLC
VGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMVRRMGRVPGIKFSKEKTTWVDVVNRRLVVE
KCGSTPSDTSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSKVDHGGLAEENGIKVGD
QVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKEMVSEYCWLDRLSNGVLQQLSP
ASESSSSVSSCASSAPYSSGSLPSDRMDICLGQEEPGSRGPGWGRADTAMQTEPDAGGRVETWC
SVRPTVILRDTAIRSDGPHPGRRLDSALSESPKTALLLALSRPRPPITRSQSYLTLWEEKQQRK
KEKSGSPGEKGALQRSKTLMNLFFKGGRQGRLARDGRREAWTLDSGSLAKTYPRLDIEKAGGVG
PVPKFVTWRLRRDRERGRALLSARSGSPSSQLPNVDEQVQAWESRRPLIQDLAQRLLTDDEVLA
VTRHCSRYVHEGGIEDLVRPLLAILDRPEKLLLLRDIRSVVAPTDLGRFDSMVMPVELEAFEAL
KSRAVRPPALRPARQDTPPKRHLITPVPDSRGGFYLLPVNGFPEEEDDGELRKRLGAFKVSPSA
SAPRHPHKGIPPLQDVPVDAFTPLRIACTPPPQLPPVAPGSLRPNWLLTEPLSREHPPQSQIRG
RAQSRSRSRSRSRSRSRSSLGQGKSPGRRSPSPVPTPAPSMASGRYHKPRKARPPLPRPLDGEA
AKVGSKQGPSENGTEGTAEEAAMKTPSGELKTVTLSKMKQSLGISISGGIESKVQPMVKIEKIF
PGGAAFLSGALQAGFELVAVDGENLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPSPRPSP
SDSSALTDGGLPADHLPAHQPLDAAPVPAHWLPEPPTNPQTPPTDARLLQPTPSPAPSPALQTP
DSKPAPSPRIP

hide sequence

RefSeq Acc Id:	XP_034787202 ⟸ XM_034931311
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_034787198 ⟸ XM_034931307
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_034787201 ⟸ XM_034931310
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_034787197 ⟸ XM_034931306
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_034787204 ⟸ XM_034931313
- Peptide Label:	isoform X12
- UniProtKB:	A0A2R9BDW1 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000027824 ⟸ ENSPPAT00000050667

RefSeq Acc Id:

ENSPPAP00000027821 ⟸ ENSPPAT00000050664

RefSeq Acc Id:

ENSPPAP00000027830 ⟸ ENSPPAT00000050673

RefSeq Acc Id:	XP_057154961 ⟸ XM_057298978
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_057154967 ⟸ XM_057298984
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_057154966 ⟸ XM_057298983
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_057154965 ⟸ XM_057298982
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_057154964 ⟸ XM_057298981
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063463585 ⟸ XM_063607515
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063463584 ⟸ XM_063607514
- Peptide Label:	isoform X6

Protein Domains

PDZ

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000036974	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000050664.1	UniProtKB/TrEMBL
	ENSPPAT00000050667.1	UniProtKB/TrEMBL
	ENSPPAT00000050673.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1160.20	UniProtKB/TrEMBL
	2.30.42.10	UniProtKB/TrEMBL
InterPro	PDZ	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	PDZD7_HN-like	UniProtKB/TrEMBL
NCBI Gene	PDZD7	ENTREZGENE
PANTHER	PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED	UniProtKB/TrEMBL
	PDZ DOMAIN-CONTAINING PROTEIN 7	UniProtKB/TrEMBL
Pfam	PDZ	UniProtKB/TrEMBL
PROSITE	PDZ	UniProtKB/TrEMBL
SMART	PDZ	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50156	UniProtKB/TrEMBL
UniProt	A0A2R9BDW1	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BDY3_PANPA	UniProtKB/TrEMBL
	A0A2R9BMD0_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM