LOC100994805 (cystatin-9-like) - Rat Genome Database

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Gene: LOC100994805 (cystatin-9-like) Pan paniscus
Analyze
Symbol: LOC100994805 (Ensembl: CST9L)
Name: cystatin-9-like (Ensembl:cystatin 9 like)
RGD ID: 12033882
Description: ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (inferred); INVOLVED IN antimicrobial humoral response (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CST9L
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22124,451,522 - 24,455,328 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12024,448,355 - 24,452,132 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02023,520,189 - 23,523,802 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12023,872,865 - 23,876,571 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2023,873,081 - 23,876,571 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003829366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000043693   ⟹   ENSPPAP00000020895
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2023,873,081 - 23,876,571 (-)Ensembl
RefSeq Acc Id: XM_003829366   ⟹   XP_003829414
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22124,451,522 - 24,455,328 (-)NCBI
NHGRI_mPanPan12024,448,355 - 24,452,132 (-)NCBI
Mhudiblu_PPA_v02023,520,189 - 23,523,802 (-)NCBI
PanPan1.12023,872,865 - 23,876,571 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003829414 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000020895
  ENSPPAP00000020895.1
Reference Protein Sequences
RefSeq Acc Id: XP_003829414   ⟸   XM_003829366
- UniProtKB: A0A2R9AYI3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000020895   ⟸   ENSPPAT00000043693
Protein Domains
Cystatin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033681 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000043693.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.450.10 UniProtKB/TrEMBL
InterPro CST9-like UniProtKB/TrEMBL
  Cystatin_dom UniProtKB/TrEMBL
  Cystatin_sf UniProtKB/TrEMBL
NCBI Gene LOC100994805 ENTREZGENE
PANTHER CYSTATIN-9-LIKE UniProtKB/TrEMBL
  PTHR46945 UniProtKB/TrEMBL
Pfam Cystatin UniProtKB/TrEMBL
SMART SM00043 UniProtKB/TrEMBL
Superfamily-SCOP SSF54403 UniProtKB/TrEMBL
UniProt A0A2R9AYI3 ENTREZGENE, UniProtKB/TrEMBL