PPP2R3C (protein phosphatase 2 regulatory subunit B''gamma) - Rat Genome Database

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Gene: PPP2R3C (protein phosphatase 2 regulatory subunit B''gamma) Pan paniscus
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Symbol: PPP2R3C
Name: protein phosphatase 2 regulatory subunit B''gamma
RGD ID: 11981522
Description: ENCODES a protein that exhibits metal ion binding (inferred); INVOLVED IN B cell homeostasis (ortholog); positive regulation of B cell differentiation (ortholog); regulation of antimicrobial humoral response (ortholog); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); ectodermal dysplasia and immunodeficiency 2 (ortholog); Myoectodermal Gonadal Dysgenesis Syndrome (ortholog); FOUND IN centrosome (inferred); cytoplasm (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21536,395,267 - 36,432,374 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11435,611,774 - 35,648,877 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01415,834,603 - 15,871,741 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11434,020,893 - 34,056,842 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1434,020,893 - 34,056,842 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (IEA)
cytoplasm  (IEA)
cytosol  (IEA)
Golgi apparatus  (IEA)
nucleoplasm  (IEA)
nucleus  (IEA)
spindle  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
PPP2R3C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21536,395,267 - 36,432,374 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11435,611,774 - 35,648,877 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01415,834,603 - 15,871,741 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11434,020,893 - 34,056,842 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1434,020,893 - 34,056,842 (-)Ensemblpanpan1.1panPan2
PPP2R3C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381435,085,472 - 35,122,298 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1435,085,467 - 35,122,517 (-)EnsemblGRCh38hg38GRCh38
GRCh371435,554,678 - 35,591,504 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361434,624,429 - 34,661,270 (-)NCBINCBI36Build 36hg18NCBI36
Build 341434,624,428 - 34,661,270NCBI
Celera1415,418,500 - 15,455,350 (-)NCBICelera
Cytogenetic Map14q13.2NCBI
HuRef1415,667,340 - 15,704,214 (-)NCBIHuRef
CHM1_11435,554,409 - 35,591,253 (-)NCBICHM1_1
T2T-CHM13v2.01429,282,404 - 29,319,252 (-)NCBIT2T-CHM13v2.0
Ppp2r3c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391255,327,594 - 55,350,024 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1255,325,776 - 55,349,783 (-)EnsemblGRCm39 Ensembl
GRCm381255,280,809 - 55,303,239 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1255,278,991 - 55,302,998 (-)EnsemblGRCm38mm10GRCm38
MGSCv371256,381,801 - 56,403,987 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361256,198,845 - 56,221,093 (-)NCBIMGSCv36mm8
Celera1256,424,963 - 56,446,979 (-)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1223.9NCBI
Ppp2r3c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8678,382,849 - 78,406,037 (-)NCBIGRCr8
mRatBN7.2672,647,025 - 72,670,885 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl672,647,025 - 72,672,491 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx673,070,331 - 73,093,374 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0673,376,682 - 73,399,726 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0672,805,293 - 72,828,333 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0676,056,585 - 76,079,755 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl676,056,499 - 76,079,664 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0685,593,212 - 85,615,398 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4675,516,505 - 75,539,654 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1675,519,630 - 75,542,780 (-)NCBI
Celera671,488,985 - 71,511,928 (-)NCBICelera
Cytogenetic Map6q23NCBI
Ppp2r3c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540925,920,973 - 25,943,985 (+)NCBIChiLan1.0ChiLan1.0
PPP2R3C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1813,863,017 - 13,885,245 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl813,863,380 - 13,885,130 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha813,659,930 - 13,682,365 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0813,969,930 - 13,992,392 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl813,969,834 - 13,992,077 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1813,671,609 - 13,694,060 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0813,735,938 - 13,758,620 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0814,025,219 - 14,047,912 (-)NCBIUU_Cfam_GSD_1.0
Ppp2r3c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864045,741,710 - 45,777,125 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364949,244,588 - 9,283,019 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364949,247,600 - 9,283,019 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPP2R3C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl764,763,050 - 64,789,921 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1764,762,863 - 64,789,919 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PPP2R3C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12411,901,522 - 11,935,764 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2411,900,604 - 11,935,560 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666053863,290 - 897,722 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppp2r3c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248381,627,873 - 1,657,475 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248381,627,632 - 1,655,079 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000036984   ⟹   ENSPPAP00000014303
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1434,020,893 - 34,056,842 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036988   ⟹   ENSPPAP00000014307
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1434,043,092 - 34,056,258 (-)Ensembl
RefSeq Acc Id: XM_014347543   ⟹   XP_014203029
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21536,395,267 - 36,432,374 (-)NCBI
NHGRI_mPanPan11435,611,774 - 35,648,877 (-)NCBI
Mhudiblu_PPA_v01415,834,603 - 15,871,618 (-)NCBI
PanPan1.11434,020,893 - 34,056,744 (-)NCBI
Sequence:
RefSeq Acc Id: XM_055097473   ⟹   XP_054953448
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21536,395,267 - 36,426,577 (-)NCBI
NHGRI_mPanPan11435,611,774 - 35,643,080 (-)NCBI
RefSeq Acc Id: XM_055097474   ⟹   XP_054953449
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21536,395,267 - 36,431,900 (-)NCBI
NHGRI_mPanPan11435,611,774 - 35,648,403 (-)NCBI
RefSeq Acc Id: XM_063596188   ⟹   XP_063452258
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21536,395,267 - 36,431,729 (-)NCBI
RefSeq Acc Id: XM_063596189   ⟹   XP_063452259
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21536,395,267 - 36,422,642 (-)NCBI
RefSeq Acc Id: XP_014203029   ⟸   XM_014347543
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSPPAP00000014307   ⟸   ENSPPAT00000036988
RefSeq Acc Id: ENSPPAP00000014303   ⟸   ENSPPAT00000036984
RefSeq Acc Id: XP_054953449   ⟸   XM_055097474
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054953448   ⟸   XM_055097473
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063452258   ⟸   XM_063596188
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063452259   ⟸   XM_063596189
- Peptide Label: isoform X3

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030301 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036984.1 UniProtKB/TrEMBL
  ENSPPAT00000036988.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.238.220 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF-hand_13 UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  PPP2R3C UniProtKB/TrEMBL
KEGG Report pps:100987804 UniProtKB/TrEMBL
NCBI Gene PPP2R3C ENTREZGENE
PANTHER PTHR12085 UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B'' SUBUNIT GAMMA UniProtKB/TrEMBL
Pfam EF-hand_13 UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A0A2R9AFJ5_PANPA UniProtKB/TrEMBL
  A0A2R9AG44_PANPA UniProtKB/TrEMBL