SEMA3E (semaphorin 3E) - Rat Genome Database

Name: SEMA3E
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SEMA3E (semaphorin 3E) Pan paniscus

Analyze

Symbol:

SEMA3E

Name:

semaphorin 3E

RGD ID:

11965167

Description:

ENCODES a protein that exhibits chemorepellent activity (inferred); receptor ligand activity (inferred); semaphorin receptor binding (inferred); INVOLVED IN axon guidance (inferred); branching involved in blood vessel morphogenesis (inferred); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (inferred); ASSOCIATED WITH amenorrhea (ortholog); CHARGE syndrome (ortholog); dilated cardiomyopathy 1A (ortholog); FOUND IN extracellular space (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

semaphorin-3E

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SEMA3E (semaphorin 3E)	NCBI	Ortholog
Mus musculus (house mouse):	Sema3e (sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Sema3e (semaphorin 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sema3e (semaphorin 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SEMA3E (semaphorin 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sema3e (semaphorin 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SEMA3E (semaphorin 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SEMA3E (semaphorin 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sema3e (semaphorin 3E)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	101,216,178 - 101,499,805 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	149,480,816 - 149,764,448 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	75,329,049 - 75,612,946 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	88,994,889 - 89,274,073 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	88,995,049 - 89,274,241 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

CHARGE syndrome (ISO)

dilated cardiomyopathy 1A (ISO)

epilepsy (ISO)

Hittner Hirsch Kreh Syndrome (ISO)

hypogonadotropic hypogonadism 7 with or without anosmia (ISO)

pleomorphic xanthoastrocytoma (ISO)

schizophrenia (ISO)

syndromic microphthalmia 9 (ISO)

transient cerebral ischemia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon guidance (IEA)

branching involved in blood vessel morphogenesis (IEA)

gonadotrophin-releasing hormone neuronal migration to the hypothalamus (IEA)

negative chemotaxis (IEA)

negative regulation of angiogenesis (IEA)

negative regulation of axon extension involved in axon guidance (IEA)

negative regulation of cell-matrix adhesion (IEA)

negative regulation of neuron apoptotic process (IEA)

neural crest cell migration (IEA)

positive regulation of cell migration (IEA)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (IEA)

regulation of cell shape (IEA)

semaphorin-plexin signaling pathway (IEA)

sprouting angiogenesis (IEA)

synapse organization (IEA)

Cellular Component

extracellular space (IEA)

Molecular Function

chemorepellent activity (IEA)

protein binding (ISO)

receptor ligand activity (IEA)

semaphorin receptor binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SEMA3E
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	101,216,178 - 101,499,805 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	149,480,816 - 149,764,448 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	75,329,049 - 75,612,946 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	88,994,889 - 89,274,073 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	88,995,049 - 89,274,241 (-)	Ensembl	panpan1.1		panPan2

SEMA3E
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	83,363,238 - 83,649,139 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	83,363,238 - 83,649,139 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	82,992,554 - 83,278,455 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	82,831,158 - 83,116,260 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	82,637,872 - 82,922,975	NCBI
Celera	7	77,694,433 - 77,979,877 (-)	NCBI		Celera
Cytogenetic Map	7	q21.11	NCBI
HuRef	7	77,887,145 - 77,887,879 (-)	NCBI		HuRef
HuRef	7	77,595,681 - 77,739,611 (-)	NCBI		HuRef
CHM1_1	7	82,923,279 - 83,208,527 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	84,614,452 - 84,899,593 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	82,325,430 - 82,610,645 (-)	NCBI

Sema3e
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	14,075,290 - 14,306,703 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	14,075,290 - 14,306,703 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	14,025,276 - 14,256,689 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	14,025,276 - 14,256,689 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	14,025,276 - 14,256,689 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	14,031,321 - 14,260,320 (+)	NCBI		MGSCv36	mm8
Celera	12	24,396,140 - 24,628,407 (+)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI
cM Map	5	5.66	NCBI

Sema3e
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	21,252,686 - 21,510,449 (-)	NCBI		GRCr8
mRatBN7.2	4	20,297,534 - 20,555,287 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	20,299,718 - 20,555,229 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	25,487,004 - 25,736,649 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	21,330,088 - 21,579,569 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	19,713,113 - 19,962,579 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	17,314,745 - 17,594,659 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	17,272,511 - 17,594,598 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	17,560,774 - 17,563,239 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	4	17,288,508 - 17,411,535 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	16,523,602 - 16,781,878 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	16,525,151 - 16,673,253 (-)	NCBI
Celera	4	15,809,991 - 16,063,707 (-)	NCBI		Celera
Cytogenetic Map	4	q12	NCBI

Sema3e
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	2,732,996 - 2,831,210 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	2,732,983 - 2,831,220 (+)	NCBI	ChiLan1.0	ChiLan1.0

SEMA3E
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	22,881,135 - 22,982,549 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	22,881,133 - 23,116,696 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	22,557,413 - 22,793,028 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	23,332,852 - 23,568,629 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	23,332,879 - 23,569,152 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	22,967,259 - 23,202,826 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	22,502,891 - 22,738,629 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	23,164,304 - 23,400,247 (-)	NCBI		UU_Cfam_GSD_1.0

Sema3e
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	64,648,977 - 64,883,826 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936734	1,850,673 - 2,084,891 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936734	1,850,709 - 2,085,541 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SEMA3E
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	96,682,246 - 96,941,072 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	96,682,178 - 96,941,074 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	106,872,688 - 107,135,027 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SEMA3E
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	65,255,610 - 65,529,021 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	65,415,373 - 65,533,090 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	38,431,351 - 38,737,423 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sema3e
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	31,608,501 - 31,716,640 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624739	31,606,128 - 31,851,624 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003822740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034964340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000034271 ⟹ ENSPPAP00000011611

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	88,995,049 - 89,274,241 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000034279 ⟹ ENSPPAP00000011619

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	7	88,995,049 - 89,121,920 (-)	Ensembl

RefSeq Acc Id:

XM_003822740 ⟹ XP_003822788

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	101,216,178 - 101,499,795 (-)	NCBI
NHGRI_mPanPan1	7	149,480,816 - 149,764,439 (-)	NCBI
Mhudiblu_PPA_v0	7	75,329,049 - 75,612,936 (-)	NCBI
PanPan1.1	7	88,994,889 - 89,274,073 (-)	NCBI

Sequence:

show sequence

GCCTGAACTTTCCTGTAAACAGCCACTGACAGACTGCATCCCTGCTGGGTGGATCCTGCGACTC
CTAGAGGGAATGGCACTTCTTGTTTTTAATTAGCAAGGTGAAAGGTGAATTAAAACTAGCAGTT
TGGCAAGTCAGTGCAAGAGGCTGACTTCTGAGAGGCTTCCAGGAGCCCGAAGAGAGGACCTCCA
CGGGAGAAGGGAGTGCGTGTGCTCGGTTTTTTTTTTTTCTTCTCTCTCTCTTTTTTTTTTTTCT
GAATGAACAGCTTTGCCCAAGTGACTGAAAAATACAGCTTCTTCCTGAATCTAACGGCGTAGTT
GCTGAAGAGCGCTCTAGACAGGACATGGCTCTGAAGACTCACTCTTTGGAATGTCCTCTTGCTC
CCGGCTTATAAACAACTGTCCCGAGGAAAGAAAGGTTTTACATAGCCAAATACAGCCTGACAAA
TGGCACTTCGGAACTGTGCTTTCTGATGACAACGCGTTCGATTTCTGACAAAGCCTCTCGCACG
CTGCCCCTGGAGGGAAGTCCTAAGTAAAACTCAGACCCTCCTTAAAGTGAGGAGCGAGGGCTTG
GACGGTGAACACGGCAGCATGGCATCCGCCGGGCACATTATCACCTTGCTCCTGTGGGGTTACT
TACTGGAGCTTTGGACAGGAGGTCATACAGCTGATACTACCCACCCCCGGTTACGCCTGTCACA
TAAAGAGCTCTTGAATCTGAACAGAACATCAATATTTCATAGTCCTTTTGGATTTCTTGATCTC
CATGCAATGCTGCTGGATGAATATCAAGAGCGGCTCTTCGTGGGAGGCAGGGACCTTGTATATT
CCCTCAGCTTGGAGAGAATCAGTGACGGCTATAAAGAGATACACTGGCCGAGTACAGCTCTAAA
AATGGAAGAATGCATAATGAAGGGAAAAGATGCGGGTGAATGTGCAAATTATGTTCGGGTTTTG
CATCACTATAACAGGACACACCTTCTGACCTGTGGTACTGGAGCTTTTGATCCAGTTTGTGCCT
TCATCAGAGTTGGATATCATTTGGAGGATCCTCTGTTTCACCTGGAATCACCCAGATCTGAGAG
AGGAAGGGGCAGATGTCCTTTTGACCCCAGCTCCTCCTTCATCTCCACTTTAATTGGTAGTGAA
TTGTTTGCTGGACTCTACAGTGACTACTGGAGCAGAGACGCTGCGATCTTCCGCAGCATGGGGC
GACTGGCCCATATCCGCACTGAGCATGACGATGAGCGTCTGTTGAAAGAACCAAAATTTGTAGG
TTCATACATGATTCCTGACAATGAAGACAGAGATGACAACAAAGTATATTTCTTTTTTACTGAG
AAGGCACTGGAGGCAGAAAACAATGCTCACGCCATTTACACCAGGGTCGGGCGACTCTGTGTGA
ATGATGTAGGAGGGCAGAGAATACTGGTGAATAAGTGGAGCACTTTCCTAAAAGCAAGACTTGT
TTGCTCAGTACCAGGAATGAATGGAATTGACACATATTTTGATGAATTAGAGGACGTTTTTTTG
CTACCTACCAGAGATCATAAGAATCCAGTGATATTTGGACTCTTTAACACTACCAGTAATATTT
TTCGAGGGCATGCTATATGTGTCTATCACATGTCTAGCATTCGGGCAGCCTTCAACGGACCATA
TGCACATAAGGAAGGACCTGAATACCACTGGTCAGTCTATGAAGGAAAAGTCCCTTATCCACGG
CCTGGTTCTTGTGCCAGCAAAGTAAATGGAGGGAGATATGGAACCACCAAGGACTATCCTGATG
ATGCCATCCGATTTGCAAGAAGTCATCCACTAATGTACCAGGCCATAAAACCTGCCCATAAAAA
ACCAATATTGGTAAAAACAGATGGAAAATATAACCTGAAACAAATAGCAGTAGATCGAGTGGAA
GCTGAGGATGGCCAATATGACGTCTTGTTTATTGGGACAGATAATGGAATTGTACTGAAAGTAA
TCACAATTTACAACCAAGAAATGGAATCAATGGAAGAAGTAATCCTAGAAGAACTTCAGATATT
CAAGGATCCAGTTCCTATTATTTCTATGGAGATTTCTTCAAAGCGGCAACAGCTGTATATTGGA
TCTGCTTCTGCTGTGGCTCAAGTCAGATTCCATCACTGTGACATGTATGGAAGTGCTTGTGCTG
ACTGCTGCCTGGCTCGAGACCCTTACTGTGCCTGGGATGGCATATCCTGCTCCCGGTATTACCC
AACAGGCACACATGCAAAAAGGCGTTTCCGGAGACAAGATGTTCGACATGGAAATGCAGCTCAG
CAGTGCTTTGGACAACAGTTTGTTGGGGATGCTTTGGATAAGACTGAAGAACATCTGGCTTATG
GCATAGAGAACAACAGTACTTTGCTGGAATGTACCCCACGATCTTTACAAGCGAAAGTTATCTG
GTTTGTACAGAAAGGACGTGAGACAAGAAAAGAGGAGGTGAAGACAGATGACAGAGTGGTTAAG
ATGGACCTTGGTTTACTCTTCCTAAGGTTACACAAATCAGATGCTGGGACCTATTTTTGCCAGA
CAGTAGAGCATAGCTTTGTCCATACGGTCCGTAAAATCACCTTGGAGGTAGTGGAAGAGGAGAA
AGTCGAGGATATGTTTAACAAGGACGATGAGGAGGACAGGCATCACAGGATGCCTTGTCCTGCT
CAGAGTAGCATCTCGCAGGGAGCAAAACCATGGTACAAGGAATTCTTGCAGCTGATCGGTTATA
GCAACTTCCAGAGAGTGGAAGAATACTGCGAGAAAGTATGGTGCACAGATAGGAAGAGGAAAAA
GCTTAAAATGTCACCCTCCAAGTGGAAGTATGCCAACCCTCAGGAAAAGAAGCTCCGTTCCAAA
CCTGAGCATTACCGCCTGCCCAGGCACACGCTGGACTCCTGATGGGGTGAGACTATCTACTGTC
TTTTGAAGAATTTATATTTGGAACGTAAAAAAGTAAAGAAATAAATAAATCATCCAACTTCTTT
GCATTACTTAAAAGAGATTTCTGTAATACAGGAATGACTATGAAGGTGTTATAATAAATTATTC
TACATACTCA

hide sequence

RefSeq Acc Id:

XM_034964340 ⟹ XP_034820231

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	6	101,221,656 - 101,499,805 (-)	NCBI
NHGRI_mPanPan1	7	149,486,291 - 149,764,448 (-)	NCBI
Mhudiblu_PPA_v0	7	75,334,533 - 75,612,946 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003822788	(Get FASTA)	NCBI Sequence Viewer
	XP_034820231	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000011611
	ENSPPAP00000011611.1
	ENSPPAP00000011619.1

RefSeq Acc Id:	XP_003822788 ⟸ XM_003822740
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9A876 (UniProtKB/TrEMBL), A0A2R9A419 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASAGHIITLLLWGYLLELWTGGHTADTTHPRLRLSHKELLNLNRTSIFHSPFGFLDLHAMLLD EYQERLFVGGRDLVYSLSLERISDGYKEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRT HLLTCGTGAFDPVCAFIRVGYHLEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLY SDYWSRDAAIFRSMGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAE NNAHAIYTRVGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDH KNPVIFGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCAS KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQY DVLFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASAVA QVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQQCFGQQ FVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDDRVVKMDLGLL FLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDRHHRMPCPAQSSISQ GAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWKYANPQEKKLRSKPEHYRL PRHTLDS hide sequence

RefSeq Acc Id:	XP_034820231 ⟸ XM_034964340
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9A419 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000011619 ⟸ ENSPPAT00000034279

RefSeq Acc Id:

ENSPPAP00000011611 ⟸ ENSPPAT00000034271

Protein Domains

Ig-like Sema

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000029005	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000034271.1	UniProtKB/TrEMBL
	ENSPPAT00000034279.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	ligand-binding face of the semaphorins, domain 2	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Immunoglobulin	UniProtKB/TrEMBL
	PSI	UniProtKB/TrEMBL
	Semap_dom	UniProtKB/TrEMBL
	Semap_dom_sf	UniProtKB/TrEMBL
	Semaphorin	UniProtKB/TrEMBL
	Semaphorin_3E	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
KEGG Report	pps:100982463	UniProtKB/TrEMBL
NCBI Gene	SEMA3E	ENTREZGENE
PANTHER	PTHR11036	UniProtKB/TrEMBL
	PTHR11036:SF22	UniProtKB/TrEMBL
Pfam	PF00047	UniProtKB/TrEMBL
	Sema	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
	SEMA	UniProtKB/TrEMBL
SMART	PSI	UniProtKB/TrEMBL
	Sema	UniProtKB/TrEMBL
Superfamily-SCOP	Plexin repeat	UniProtKB/TrEMBL
	SSF101912	UniProtKB/TrEMBL
	SSF48726	UniProtKB/TrEMBL
UniProt	A0A2R9A419	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9A876	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar