CEP97 (centrosomal protein 97) - Rat Genome Database

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Gene: CEP97 (centrosomal protein 97) Pan paniscus
Analyze
Symbol: CEP97
Name: centrosomal protein 97
RGD ID: 11945082
Description: INVOLVED IN negative regulation of cilium assembly (inferred); regulation of mitotic spindle assembly (inferred); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN centriole (inferred); centrosome (inferred); protein-containing complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: centrosomal protein of 97 kDa
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2299,660,769 - 99,709,171 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1399,665,536 - 99,713,949 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0398,812,804 - 98,858,899 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13105,494,497 - 105,539,141 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3105,494,497 - 105,536,308 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CEP97
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2299,660,769 - 99,709,171 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1399,665,536 - 99,713,949 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0398,812,804 - 98,858,899 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13105,494,497 - 105,539,141 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3105,494,497 - 105,536,308 (+)Ensemblpanpan1.1panPan2
CEP97
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383101,724,614 - 101,770,562 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3101,724,534 - 101,770,562 (+)EnsemblGRCh38hg38GRCh38
GRCh373101,443,458 - 101,489,406 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363102,926,184 - 102,968,871 (+)NCBINCBI36Build 36hg18NCBI36
Build 343102,926,183 - 102,968,871NCBI
Celera399,836,584 - 99,879,276 (+)NCBICelera
Cytogenetic Map3q12.3NCBI
HuRef398,812,356 - 98,854,863 (+)NCBIHuRef
CHM1_13101,406,776 - 101,449,462 (+)NCBICHM1_1
T2T-CHM13v2.03104,437,398 - 104,483,348 (+)NCBIT2T-CHM13v2.0
Cep97
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391655,720,250 - 55,755,237 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1655,720,251 - 55,755,218 (-)EnsemblGRCm39 Ensembl
GRCm381655,899,888 - 55,934,848 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1655,899,888 - 55,934,855 (-)EnsemblGRCm38mm10GRCm38
MGSCv371655,900,001 - 55,934,961 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361655,827,214 - 55,859,799 (-)NCBIMGSCv36mm8
Celera1656,215,320 - 56,250,333 (-)NCBICelera
Cytogenetic Map16C1.1NCBI
cM Map1633.69NCBI
Cep97
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81158,152,561 - 58,187,174 (+)NCBIGRCr8
mRatBN7.21144,683,503 - 44,711,471 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1144,683,506 - 44,711,471 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1153,460,034 - 53,487,994 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01146,121,663 - 46,149,623 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01145,245,827 - 45,273,786 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01147,146,409 - 47,174,460 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1147,146,308 - 47,174,713 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01150,327,756 - 50,355,273 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41145,658,903 - 45,687,089 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11145,716,552 - 45,744,460 (+)NCBI
Celera1144,434,493 - 44,462,608 (+)NCBICelera
Cytogenetic Map11q12NCBI
Cep97
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554273,227,130 - 3,247,062 (+)NCBIChiLan1.0ChiLan1.0
CEP97
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1338,023,788 - 8,064,131 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl338,040,668 - 8,060,095 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha338,177,212 - 8,218,683 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0338,161,916 - 8,203,211 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl338,179,806 - 8,201,378 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1338,049,482 - 8,090,862 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0338,095,875 - 8,137,087 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0338,436,238 - 8,477,706 (+)NCBIUU_Cfam_GSD_1.0
Cep97
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602148,788,944 - 148,836,496 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366301,715,155 - 1,734,444 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366301,715,225 - 1,734,560 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP97
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13157,356,253 - 157,388,411 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113157,356,248 - 157,388,425 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213166,846,046 - 166,864,860 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEP97
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12279,138,774 - 79,176,186 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2279,140,794 - 79,176,244 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604187,355,355 - 87,421,257 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep97
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478915,508,484 - 15,532,599 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478915,508,271 - 15,532,494 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000042480   ⟹   ENSPPAP00000019708
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3105,494,497 - 105,536,308 (+)Ensembl
RefSeq Acc Id: XM_003821931   ⟹   XP_003821979
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2299,660,775 - 99,709,171 (+)NCBI
NHGRI_mPanPan1399,665,542 - 99,713,949 (+)NCBI
Mhudiblu_PPA_v0398,812,806 - 98,858,899 (+)NCBI
PanPan1.13105,494,497 - 105,539,141 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008975424   ⟹   XP_008973672
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2299,660,772 - 99,709,171 (+)NCBI
NHGRI_mPanPan1399,665,538 - 99,713,949 (+)NCBI
Mhudiblu_PPA_v0398,812,804 - 98,858,899 (+)NCBI
PanPan1.13105,494,497 - 105,536,308 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034957036   ⟹   XP_034812927
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2299,660,774 - 99,709,171 (+)NCBI
NHGRI_mPanPan1399,665,540 - 99,713,949 (+)NCBI
Mhudiblu_PPA_v0398,812,805 - 98,857,388 (+)NCBI
RefSeq Acc Id: XM_055110220   ⟹   XP_054966195
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2299,660,769 - 99,709,171 (+)NCBI
NHGRI_mPanPan1399,665,536 - 99,713,949 (+)NCBI
RefSeq Acc Id: XM_063602492   ⟹   XP_063458562
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2299,663,869 - 99,709,171 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_003821979   ⟸   XM_003821931
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008973672   ⟸   XM_008975424
- Peptide Label: isoform X3
- UniProtKB: A0A2R9ARB8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034812927   ⟸   XM_034957036
- Peptide Label: isoform X2
RefSeq Acc Id: ENSPPAP00000019708   ⟸   ENSPPAT00000042480
RefSeq Acc Id: XP_054966195   ⟸   XM_055110220
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063458562   ⟸   XM_063602492
- Peptide Label: isoform X5


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033067 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000042480.1 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  Leu-rich_rpt UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
NCBI Gene CEP97 ENTREZGENE
PANTHER CENTROSOMAL PROTEIN 97KDA, ISOFORM B-RELATED UniProtKB/TrEMBL
  PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED UniProtKB/TrEMBL
Pfam LRR_9 UniProtKB/TrEMBL
PROSITE LRR UniProtKB/TrEMBL
  PS50096 UniProtKB/TrEMBL
SMART LRR_SD22 UniProtKB/TrEMBL
Superfamily-SCOP L domain-like UniProtKB/TrEMBL
UniProt A0A2R9ARB8 ENTREZGENE, UniProtKB/TrEMBL