SPAG9 (sperm associated antigen 9) - Rat Genome Database

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Gene: SPAG9 (sperm associated antigen 9) Pan paniscus
Analyze
Symbol: SPAG9
Name: sperm associated antigen 9
RGD ID: 11914379
Description: ENCODES a protein that exhibits identical protein binding (inferred); JUN kinase binding (inferred); kinesin binding (inferred); INVOLVED IN negative regulation of dendrite extension (ortholog); negative regulation of neuron differentiation (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH endometrial cancer (ortholog); hepatocellular carcinoma (ortholog); liver cirrhosis (ortholog); FOUND IN centriolar satellite (inferred); cytoplasm (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C-Jun-amino-terminal kinase-interacting protein 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21967,150,865 - 67,309,121 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11771,957,919 - 72,116,131 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01745,053,292 - 45,211,488 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11749,924,650 - 50,081,918 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1749,924,650 - 50,081,918 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
SPAG9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21967,150,865 - 67,309,121 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11771,957,919 - 72,116,131 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01745,053,292 - 45,211,488 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11749,924,650 - 50,081,918 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1749,924,650 - 50,081,918 (-)Ensemblpanpan1.1panPan2
SPAG9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381750,962,174 - 51,120,868 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1750,962,174 - 51,120,868 (-)EnsemblGRCh38hg38GRCh38
GRCh371749,039,535 - 49,198,229 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361746,397,987 - 46,553,094 (-)NCBINCBI36Build 36hg18NCBI36
Build 341746,396,280 - 46,479,270NCBI
Celera1745,500,809 - 45,659,482 (-)NCBICelera
Cytogenetic Map17q21.33NCBI
HuRef1744,409,321 - 44,567,701 (-)NCBIHuRef
CHM1_11749,103,529 - 49,262,201 (-)NCBICHM1_1
T2T-CHM13v2.01751,829,515 - 51,988,191 (-)NCBIT2T-CHM13v2.0
Spag9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391193,886,794 - 94,016,919 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1193,886,917 - 94,016,911 (+)EnsemblGRCm39 Ensembl
GRCm381193,996,046 - 94,126,093 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1193,996,091 - 94,126,085 (+)EnsemblGRCm38mm10GRCm38
MGSCv371193,857,405 - 93,987,397 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361193,812,181 - 93,942,173 (+)NCBIMGSCv36mm8
Celera11103,596,032 - 103,742,397 (+)NCBICelera
Cytogenetic Map11DNCBI
cM Map1158.9NCBI
Spag9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81079,440,311 - 79,574,709 (+)NCBIGRCr8
mRatBN7.21078,943,439 - 79,077,797 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1078,943,479 - 79,077,797 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1083,554,259 - 83,682,504 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01083,052,366 - 83,180,614 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01078,523,809 - 78,695,353 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01081,693,736 - 81,827,562 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1081,693,770 - 81,827,562 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01081,527,102 - 81,660,894 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41082,649,289 - 82,762,795 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11082,642,730 - 82,774,629 (+)NCBI
Celera1077,760,603 - 77,867,282 (+)NCBICelera
Cytogenetic Map10q26NCBI
Spag9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545110,800,128 - 10,895,400 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545110,800,251 - 10,895,400 (+)NCBIChiLan1.0ChiLan1.0
SPAG9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1926,820,381 - 26,966,315 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl926,820,002 - 26,966,300 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha926,148,726 - 26,294,511 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0927,613,837 - 27,760,017 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl927,613,700 - 27,760,276 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1926,380,745 - 26,526,372 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0926,639,936 - 26,785,790 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0926,769,987 - 26,915,874 (-)NCBIUU_Cfam_GSD_1.0
Spag9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560226,278,463 - 26,425,767 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649010,663,122 - 10,799,474 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649010,663,155 - 10,796,658 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SPAG9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1227,202,088 - 27,370,405 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11227,225,377 - 27,370,337 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21227,366,725 - 27,438,124 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SPAG9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11642,224,565 - 42,384,160 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1642,224,697 - 42,384,749 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607712,934,337 - 13,097,422 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Spag9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247956,745,537 - 6,863,173 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247956,748,513 - 6,863,201 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003817429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003817430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003817431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008970634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008970637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008970638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034942484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055101990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055101991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055101992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000048293   ⟹   ENSPPAP00000025466
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1749,924,650 - 50,081,918 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000048299   ⟹   ENSPPAP00000025472
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1749,924,656 - 50,081,918 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000048308   ⟹   ENSPPAP00000025481
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1749,924,656 - 50,009,012 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000048318   ⟹   ENSPPAP00000025491
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1749,928,742 - 50,081,878 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000048326   ⟹   ENSPPAP00000025499
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1749,928,742 - 50,081,878 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000048334   ⟹   ENSPPAP00000025507
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1749,928,742 - 50,081,878 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000048361   ⟹   ENSPPAP00000025533
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1749,949,685 - 50,009,513 (-)Ensembl
RefSeq Acc Id: XM_003817429   ⟹   XP_003817477
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,235,519 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,042,591 (-)NCBI
Mhudiblu_PPA_v01745,053,298 - 45,137,962 (-)NCBI
PanPan1.11749,924,656 - 50,009,012 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003817430   ⟹   XP_003817478
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,309,121 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,116,131 (-)NCBI
Mhudiblu_PPA_v01745,053,298 - 45,211,488 (-)NCBI
PanPan1.11749,924,656 - 50,081,918 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003817431   ⟹   XP_003817479
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,309,096 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,116,125 (-)NCBI
Mhudiblu_PPA_v01745,053,292 - 45,211,488 (-)NCBI
PanPan1.11749,924,650 - 50,081,918 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008970634   ⟹   XP_008968882
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,309,121 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,116,124 (-)NCBI
Mhudiblu_PPA_v01745,056,178 - 45,211,276 (-)NCBI
PanPan1.11749,928,093 - 50,081,918 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008970638   ⟹   XP_008968886
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,235,560 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,042,631 (-)NCBI
Mhudiblu_PPA_v01745,057,032 - 45,137,744 (-)NCBI
PanPan1.11749,928,387 - 50,009,012 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034942477   ⟹   XP_034798368
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,309,096 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,116,125 (-)NCBI
Mhudiblu_PPA_v01745,056,178 - 45,211,487 (-)NCBI
RefSeq Acc Id: XM_034942481   ⟹   XP_034798372
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,309,121 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,116,125 (-)NCBI
Mhudiblu_PPA_v01745,056,178 - 45,211,486 (-)NCBI
RefSeq Acc Id: XM_034942484   ⟹   XP_034798375
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,235,515 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,042,592 (-)NCBI
Mhudiblu_PPA_v01745,056,178 - 45,137,957 (-)NCBI
RefSeq Acc Id: XM_055101990   ⟹   XP_054957965
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,309,096 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,116,125 (-)NCBI
RefSeq Acc Id: XM_055101991   ⟹   XP_054957966
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,309,096 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,116,125 (-)NCBI
RefSeq Acc Id: XM_055101992   ⟹   XP_054957967
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21967,150,865 - 67,235,515 (-)NCBI
NHGRI_mPanPan11771,957,919 - 72,042,593 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_003817479   ⟸   XM_003817431
- Peptide Label: isoform X4
- UniProtKB: A0A2R9B8Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003817478   ⟸   XM_003817430
- Peptide Label: isoform X7
- UniProtKB: A0A2R9B798 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003817477   ⟸   XM_003817429
- Peptide Label: isoform X10
- UniProtKB: A0A2R9B8S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008968882   ⟸   XM_008970634
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_008968886   ⟸   XM_008970638
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_034798368   ⟸   XM_034942477
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034798372   ⟸   XM_034942481
- Peptide Label: isoform X5
RefSeq Acc Id: XP_034798375   ⟸   XM_034942484
- Peptide Label: isoform X9
RefSeq Acc Id: ENSPPAP00000025466   ⟸   ENSPPAT00000048293
RefSeq Acc Id: ENSPPAP00000025472   ⟸   ENSPPAT00000048299
RefSeq Acc Id: ENSPPAP00000025499   ⟸   ENSPPAT00000048326
RefSeq Acc Id: ENSPPAP00000025507   ⟸   ENSPPAT00000048334
RefSeq Acc Id: ENSPPAP00000025481   ⟸   ENSPPAT00000048308
RefSeq Acc Id: ENSPPAP00000025491   ⟸   ENSPPAT00000048318
RefSeq Acc Id: ENSPPAP00000025533   ⟸   ENSPPAT00000048361
RefSeq Acc Id: XP_054957965   ⟸   XM_055101990
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054957966   ⟸   XM_055101991
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054957967   ⟸   XM_055101992
- Peptide Label: isoform X8
Protein Domains
JNK-interacting protein leucine zipper II   RH1   RH2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035613 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000048293.1 UniProtKB/TrEMBL
  ENSPPAT00000048299.1 UniProtKB/TrEMBL
  ENSPPAT00000048308.1 UniProtKB/TrEMBL
  ENSPPAT00000048318.1 UniProtKB/TrEMBL
  ENSPPAT00000048326.1 UniProtKB/TrEMBL
  ENSPPAT00000048334.1 UniProtKB/TrEMBL
  ENSPPAT00000048361.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.1770 UniProtKB/TrEMBL
  2.130.10.10 UniProtKB/TrEMBL
  arf6 gtpase in complex with a specific effector, jip4 UniProtKB/TrEMBL
InterPro JIP3/JIP4 UniProtKB/TrEMBL
  JIP_LZII UniProtKB/TrEMBL
  JNK/Rab-associated_protein-1_N UniProtKB/TrEMBL
  RH1 UniProtKB/TrEMBL
  RH2 UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
KEGG Report pps:100980057 UniProtKB/TrEMBL
NCBI Gene SPAG9 ENTREZGENE
PANTHER C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN 4 UniProtKB/TrEMBL
  PTHR13886 UniProtKB/TrEMBL
Pfam JIP_LZII UniProtKB/TrEMBL
  Jnk-SapK_ap_N UniProtKB/TrEMBL
  WD40_2 UniProtKB/TrEMBL
PROSITE RH1 UniProtKB/TrEMBL
  RH2 UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/TrEMBL
UniProt A0A2R9B798 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B7D7_PANPA UniProtKB/TrEMBL
  A0A2R9B7F7_PANPA UniProtKB/TrEMBL
  A0A2R9B8Q4 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B8S6 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B8T3_PANPA UniProtKB/TrEMBL
  A0A2R9BES2_PANPA UniProtKB/TrEMBL