AGPAT3 (1-acylglycerol-3-phosphate O-acyltransferase 3) - Rat Genome Database

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Gene: AGPAT3 (1-acylglycerol-3-phosphate O-acyltransferase 3) Pan paniscus
Analyze
Symbol: AGPAT3
Name: 1-acylglycerol-3-phosphate O-acyltransferase 3
RGD ID: 11880890
Description: ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (inferred); acyltransferase activity (inferred); lysophosphatidic acid acyltransferase activity (inferred); ASSOCIATED WITH autistic disorder (ortholog); cataract 9 multiple types (ortholog); developmental and epileptic encephalopathy 30 (ortholog); FOUND IN endomembrane system (inferred); endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22239,870,866 - 39,992,820 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12134,721,419 - 34,843,964 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02130,120,899 - 30,243,438 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12143,420,398 - 43,540,453 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2143,479,513 - 43,540,453 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
AGPAT3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22239,870,866 - 39,992,820 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12134,721,419 - 34,843,964 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02130,120,899 - 30,243,438 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12143,420,398 - 43,540,453 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2143,479,513 - 43,540,453 (+)Ensemblpanpan1.1panPan2
AGPAT3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382143,865,223 - 43,987,592 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2143,865,223 - 43,987,592 (+)EnsemblGRCh38hg38GRCh38
GRCh372145,285,104 - 45,407,473 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362144,109,544 - 44,231,903 (+)NCBINCBI36Build 36hg18NCBI36
Build 342144,109,543 - 44,228,980NCBI
Celera2130,390,772 - 30,513,125 (+)NCBICelera
Cytogenetic Map21q22.3NCBI
HuRef2130,692,081 - 30,777,963 (+)NCBIHuRef
CHM1_12144,845,955 - 44,968,331 (+)NCBICHM1_1
T2T-CHM13v2.02142,220,581 - 42,343,213 (+)NCBIT2T-CHM13v2.0
Agpat3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391078,105,008 - 78,188,335 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1078,105,012 - 78,188,323 (-)EnsemblGRCm39 Ensembl
GRCm381078,269,174 - 78,352,497 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1078,269,178 - 78,352,489 (-)EnsemblGRCm38mm10GRCm38
MGSCv371077,734,308 - 77,814,445 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361077,674,692 - 77,754,829 (-)NCBIMGSCv36mm8
Celera1079,293,723 - 79,373,796 (-)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Agpat3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82010,330,650 - 10,415,026 (+)NCBIGRCr8
mRatBN7.22010,330,960 - 10,415,358 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2010,384,507 - 10,415,358 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2011,084,249 - 11,115,411 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02010,445,150 - 10,476,312 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02010,916,520 - 10,947,716 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02011,060,584 - 11,144,806 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2011,114,164 - 11,144,806 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02013,230,349 - 13,314,837 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42010,720,044 - 10,751,589 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12010,731,526 - 10,748,014 (+)NCBI
Celera2011,892,679 - 11,922,116 (+)NCBICelera
Cytogenetic Map20p12NCBI
Agpat3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540741,365,887 - 41,434,090 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540741,365,920 - 41,434,090 (-)NCBIChiLan1.0ChiLan1.0
AGPAT3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13137,855,323 - 37,879,816 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3137,844,109 - 37,879,741 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3136,957,368 - 37,042,325 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03137,347,096 - 37,432,308 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3137,296,291 - 37,427,627 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13137,214,301 - 37,299,491 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03137,198,278 - 37,283,390 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03137,692,630 - 37,777,937 (+)NCBIUU_Cfam_GSD_1.0
Agpat3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497137,043,670 - 37,099,574 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936500367,651 - 414,630 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936500367,645 - 421,539 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AGPAT3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13206,884,538 - 206,906,353 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113206,803,219 - 206,906,363 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
AGPAT3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1287,622,839 - 87,735,552 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl287,654,097 - 87,730,785 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605415,704,361 - 15,824,391 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Agpat3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474530,037,415 - 30,082,239 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474530,038,357 - 30,107,499 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000034975   ⟹   ENSPPAP00000012311
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2143,479,513 - 43,540,453 (+)Ensembl
RefSeq Acc Id: XM_003823849   ⟹   XP_003823897
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22239,872,100 - 39,992,820 (+)NCBI
NHGRI_mPanPan12134,723,351 - 34,843,964 (+)NCBI
Mhudiblu_PPA_v02130,123,037 - 30,243,438 (+)NCBI
PanPan1.12143,420,398 - 43,540,453 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008977561   ⟹   XP_008975809
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22239,970,900 - 39,992,820 (+)NCBI
NHGRI_mPanPan12134,824,596 - 34,843,964 (+)NCBI
Mhudiblu_PPA_v02130,224,005 - 30,243,438 (+)NCBI
PanPan1.12143,521,040 - 43,540,453 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034947979   ⟹   XP_034803870
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22239,870,866 - 39,992,820 (+)NCBI
NHGRI_mPanPan12134,721,419 - 34,843,964 (+)NCBI
Mhudiblu_PPA_v02130,120,926 - 30,243,438 (+)NCBI
RefSeq Acc Id: XM_034947980   ⟹   XP_034803871
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22239,933,371 - 39,992,820 (+)NCBI
NHGRI_mPanPan12134,786,983 - 34,843,964 (+)NCBI
Mhudiblu_PPA_v02130,186,479 - 30,243,438 (+)NCBI
RefSeq Acc Id: XM_055105271   ⟹   XP_054961246
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22239,947,214 - 39,992,820 (+)NCBI
NHGRI_mPanPan12134,797,864 - 34,843,964 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003823897 (Get FASTA)   NCBI Sequence Viewer  
  XP_008975809 (Get FASTA)   NCBI Sequence Viewer  
  XP_034803870 (Get FASTA)   NCBI Sequence Viewer  
  XP_034803871 (Get FASTA)   NCBI Sequence Viewer  
  XP_054961246 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000012311.1
Reference Protein Sequences
RefSeq Acc Id: XP_003823897   ⟸   XM_003823849
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AA44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008975809   ⟸   XM_008977561
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034803870   ⟸   XM_034947979
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AA44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034803871   ⟸   XM_034947980
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AA44 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000012311   ⟸   ENSPPAT00000034975
RefSeq Acc Id: XP_054961246   ⟸   XM_055105271
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AA44 (UniProtKB/TrEMBL)
Protein Domains
Phospholipid/glycerol acyltransferase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029344 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000034975.1 UniProtKB/TrEMBL
InterPro Acyltransf_C UniProtKB/TrEMBL
  Plipid/glycerol_acylTrfase UniProtKB/TrEMBL
KEGG Report pps:100968639 UniProtKB/TrEMBL
NCBI Gene AGPAT3 ENTREZGENE
PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE GAMMA UniProtKB/TrEMBL
  1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED UniProtKB/TrEMBL
Pfam Acyltransf_C UniProtKB/TrEMBL
  Acyltransferase UniProtKB/TrEMBL
SMART PlsC UniProtKB/TrEMBL
Superfamily-SCOP Glycerol-3-phosphate (1)-acyltransferase UniProtKB/TrEMBL
UniProt A0A2R9AA44 ENTREZGENE, UniProtKB/TrEMBL