INTS14 (integrator complex subunit 14) - Rat Genome Database

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Gene: INTS14 (integrator complex subunit 14) Pan paniscus
Analyze
Symbol: INTS14
Name: integrator complex subunit 14
RGD ID: 11867123
Description: INVOLVED IN snRNA 3'-end processing (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: UPF0464 protein C15orf44-like; von Willebrand factor A domain containing 9; von Willebrand factor A domain-containing protein 9; VWA9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21654,828,136 - 54,859,784 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11558,999,180 - 59,030,682 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01544,521,277 - 44,552,780 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11562,800,351 - 62,832,011 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1562,800,351 - 62,831,946 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
INTS14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21654,828,136 - 54,859,784 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11558,999,180 - 59,030,682 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01544,521,277 - 44,552,780 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11562,800,351 - 62,832,011 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1562,800,351 - 62,831,946 (-)Ensemblpanpan1.1panPan2
INTS14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381565,578,757 - 65,611,131 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1565,578,753 - 65,611,289 (-)EnsemblGRCh38hg38GRCh38
GRCh371565,871,095 - 65,903,469 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361563,658,169 - 63,690,460 (-)NCBINCBI36Build 36hg18NCBI36
Celera1542,737,603 - 42,781,299 (-)NCBICelera
Cytogenetic Map15q22.31NCBI
HuRef1542,695,317 - 42,727,848 (-)NCBIHuRef
CHM1_11565,988,978 - 66,021,334 (-)NCBICHM1_1
T2T-CHM13v2.01563,388,156 - 63,420,529 (-)NCBIT2T-CHM13v2.0
Ints14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39964,868,143 - 64,894,260 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl964,868,187 - 64,894,260 (+)EnsemblGRCm39 Ensembl
GRCm38964,960,832 - 64,986,981 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl964,960,905 - 64,986,978 (+)EnsemblGRCm38mm10GRCm38
MGSCv37964,808,639 - 64,834,781 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36964,758,943 - 64,784,714 (+)NCBIMGSCv36mm8
Celera962,191,383 - 62,217,494 (+)NCBICelera
Cytogenetic Map9CNCBI
cM Map935.02NCBI
Ints14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8874,370,687 - 74,398,153 (+)NCBIGRCr8
mRatBN7.2865,475,788 - 65,500,807 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl865,475,910 - 65,500,804 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx870,988,599 - 71,013,482 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0869,261,601 - 69,286,485 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0867,131,140 - 67,155,974 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0870,446,157 - 70,471,140 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl870,447,040 - 70,471,137 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0870,145,709 - 70,170,180 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4869,218,175 - 69,243,053 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1869,237,228 - 69,262,104 (+)NCBI
Celera864,878,667 - 64,903,542 (+)NCBICelera
Cytogenetic Map8q24NCBI
Ints14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554509,892,296 - 9,925,231 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554509,892,476 - 9,925,231 (+)NCBIChiLan1.0ChiLan1.0
INTS14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13029,921,353 - 29,956,473 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3029,921,996 - 29,956,409 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3029,849,551 - 29,884,175 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03030,111,845 - 30,146,464 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3030,111,859 - 30,146,421 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13030,041,425 - 30,076,247 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03030,103,423 - 30,138,614 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03030,344,188 - 30,379,356 (-)NCBIUU_Cfam_GSD_1.0
Ints14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640107,982,278 - 108,017,476 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647125,830,320 - 25,876,760 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647125,830,320 - 25,865,454 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INTS14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1163,567,777 - 163,603,184 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11163,565,826 - 163,603,185 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21181,142,022 - 181,177,474 (-)NCBISscrofa10.2Sscrofa10.2susScr3
INTS14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12617,969,545 - 18,002,216 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2617,969,771 - 18,005,020 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048123,439,453 - 123,472,200 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ints14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247816,970,630 - 7,007,053 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247816,970,652 - 7,006,760 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000037169   ⟹   ENSPPAP00000014483
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1562,800,351 - 62,831,946 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000037178   ⟹   ENSPPAP00000014491
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1562,801,003 - 62,831,334 (-)Ensembl
RefSeq Acc Id: XM_003827979   ⟹   XP_003828027
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,136 - 54,859,602 (-)NCBI
NHGRI_mPanPan11558,999,180 - 59,030,682 (-)NCBI
Mhudiblu_PPA_v01544,521,277 - 44,552,780 (-)NCBI
PanPan1.11562,800,351 - 62,832,011 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003827980   ⟹   XP_003828028
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,136 - 54,859,506 (-)NCBI
NHGRI_mPanPan11558,999,180 - 59,030,587 (-)NCBI
Mhudiblu_PPA_v01544,521,277 - 44,552,679 (-)NCBI
PanPan1.11562,800,351 - 62,831,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003827982   ⟹   XP_003828030
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,136 - 54,856,501 (-)NCBI
NHGRI_mPanPan11558,999,180 - 59,027,571 (-)NCBI
Mhudiblu_PPA_v01544,521,277 - 44,552,679 (-)NCBI
PanPan1.11562,800,372 - 62,832,011 (-)NCBI
Sequence:
RefSeq Acc Id: XM_055099038   ⟹   XP_054955013
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,136 - 54,859,513 (-)NCBI
NHGRI_mPanPan11558,999,180 - 59,030,568 (-)NCBI
RefSeq Acc Id: XM_055099040   ⟹   XP_054955015
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,136 - 54,859,161 (-)NCBI
NHGRI_mPanPan11558,999,180 - 59,030,241 (-)NCBI
RefSeq Acc Id: XM_063596736   ⟹   XP_063452806
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,136 - 54,859,604 (-)NCBI
RefSeq Acc Id: XM_063596737   ⟹   XP_063452807
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,936 - 54,859,784 (-)NCBI
RefSeq Acc Id: XM_063596739   ⟹   XP_063452809
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,828,136 - 54,859,466 (-)NCBI
RefSeq Acc Id: XR_010109944
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21654,831,309 - 54,859,784 (-)NCBI
RefSeq Acc Id: XP_003828027   ⟸   XM_003827979
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AG12 (UniProtKB/TrEMBL),   A0A2R9AC59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003828028   ⟸   XM_003827980
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AG12 (UniProtKB/TrEMBL),   A0A2R9AC59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003828030   ⟸   XM_003827982
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AC59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000014491   ⟸   ENSPPAT00000037178
RefSeq Acc Id: ENSPPAP00000014483   ⟸   ENSPPAT00000037169
RefSeq Acc Id: XP_054955013   ⟸   XM_055099038
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AG12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054955015   ⟸   XM_055099040
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063452806   ⟸   XM_063596736
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AG12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063452809   ⟸   XM_063596739
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AG12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063452807   ⟸   XM_063596737
- Peptide Label: isoform X2

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030391 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000037169.1 UniProtKB/TrEMBL
  ENSPPAT00000037178.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.410 UniProtKB/TrEMBL
InterPro INTS14 UniProtKB/TrEMBL
  IntS14_C UniProtKB/TrEMBL
  IntS14_C UniProtKB/TrEMBL
  VWF_A UniProtKB/TrEMBL
  vWFA_dom_sf UniProtKB/TrEMBL
KEGG Report pps:100984631 UniProtKB/TrEMBL
NCBI Gene INTS14 ENTREZGENE
PANTHER INTEGRATOR COMPLEX SUBUNIT 14 UniProtKB/TrEMBL
  PTHR13532 UniProtKB/TrEMBL
Pfam IntS14 UniProtKB/TrEMBL
  IntS14_C UniProtKB/TrEMBL
  VWA_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53300 UniProtKB/TrEMBL
UniProt A0A2R9AC59 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AG12 ENTREZGENE, UniProtKB/TrEMBL