ZNF34 (zinc finger protein 34) - Rat Genome Database

Name: ZNF34
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ZNF34 (zinc finger protein 34) Pan paniscus

Analyze

Symbol:

ZNF34

Name:

zinc finger protein 34

RGD ID:

11861530

Description:

ENCODES a protein that exhibits metal ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosol (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF34 (zinc finger protein 34)	NCBI	Ortholog
Mus musculus (house mouse):	Gm7072 (predicted gene 7072)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Zfp34 (zinc finger protein 34)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf34 (zinc finger protein 34)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF34 (zinc finger protein 34)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF34 (zinc finger protein 34)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF34 (zinc finger protein 34)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf34 (zinc finger protein 34)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	162,269,847 - 162,285,184 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	137,801,412 - 137,817,078 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	141,544,067 - 141,559,787 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	144,526,475 - 144,540,948 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	144,523,180 - 144,540,937 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of DNA-templated transcription (IEA)

Cellular Component

cytosol (IEA)

nucleoplasm (IEA)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ZNF34
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	162,269,847 - 162,285,184 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	137,801,412 - 137,817,078 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	141,544,067 - 141,559,787 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	144,526,475 - 144,540,948 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	144,523,180 - 144,540,937 (-)	Ensembl	panpan1.1		panPan2

ZNF34
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	144,772,224 - 144,787,317 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	144,772,224 - 144,787,345 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	145,997,609 - 146,012,702 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	145,969,303 - 145,983,529 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	145,969,311 - 145,976,469	NCBI
Celera	8	142,175,990 - 142,190,229 (-)	NCBI		Celera
Cytogenetic Map	8	q24.3	NCBI
HuRef	8	141,114,088 - 141,128,302 (-)	NCBI		HuRef
CHM1_1	8	146,037,120 - 146,051,301 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	145,945,720 - 145,960,823 (-)	NCBI		T2T-CHM13v2.0

Gm7072
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	22,504,852 - 22,539,853 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	22,504,852 - 22,533,818 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	22,285,871 - 22,319,979 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	22,285,871 - 22,314,837 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	22,422,838 - 22,451,804 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	21,990,571 - 22,019,510 (-)	NCBI		MGSCv36	mm8
Celera	7	146,941,520 - 146,970,356 (-)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	11.4	NCBI

Zfp34
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	162,776,433 - 162,797,153 (+)	NCBI		GRCr8
mRatBN7.2	5	157,509,762 - 157,513,970 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	157,509,451 - 157,599,926 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	5	163,576,463 - 163,596,466 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	163,593,658 - 163,596,726 (+)	NCBI	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	167,256,465 - 167,269,935 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	164,096,503 - 164,112,007 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	155,784,327 - 155,802,918 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Znf34
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	3,407,957 - 3,414,067 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	3,400,373 - 3,413,521 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZNF34
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	38,106,030 - 38,119,345 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	38,110,944 - 38,118,519 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	38,066,716 - 38,098,860 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	38,579,758 - 38,611,953 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	13	38,271,249 - 38,303,390 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	38,380,105 - 38,412,444 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	38,855,410 - 38,887,814 (+)	NCBI		UU_Cfam_GSD_1.0

ZNF34
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	122,226 - 134,917 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	121,980 - 134,925 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	210,689 - 223,476 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF34
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	138,973,624 - 138,988,471 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	138,973,354 - 138,987,723 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	851,730 - 868,057 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf34
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	12,078,230 - 12,083,469 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	12,077,527 - 12,090,579 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008972720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008972721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008972722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008972723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014346037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034966944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034966945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034966946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057302962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063606513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063606514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000041878 ⟹ ENSPPAP00000019127

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	8	144,523,180 - 144,540,937 (-)	Ensembl

RefSeq Acc Id:

XM_008972720 ⟹ XP_008970968

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	7	162,269,847 - 162,285,171 (-)	NCBI
NHGRI_mPanPan1	8	137,801,412 - 137,817,067 (-)	NCBI
Mhudiblu_PPA_v0	8	141,544,067 - 141,559,787 (-)	NCBI
PanPan1.1	8	144,526,475 - 144,540,948 (-)	NCBI

Sequence:

show sequence

TTCCGGATCGGTTCCGATTGGCGGGGAGGGAGGGCCGAACGGGCGAGGTTGGGCTGCCGTGCTG
CTCGGCGGCGCTGAGGCCAAATAGTTGCATCACATGTATCTAATCCGAGAGTCTCATGCTTCTG
CTCCTCAGTGACCAGCTCCTGCTCACTGCCCTCAGAAAGCCCAACCCTCAGGCAATGGCGGCCT
TGTTCCTGTCTGCCCCACCCCAGGCCGAGGTGACCTTCGAGGACGTGGCTGTGTACCTCTCCCG
GGAGGAATGGGGCCGCCTGGGCCCTGCTCAGAGGGGCCTCTACAGGGACGTGATGCTGGAGACC
TACGGGAACCTAGTCTCACTGGGAGTAGGACCTGCAGGCCCCAAGCCTGGAGTGATCTCGCAGT
TGGAGCGAGGGGATGAGCCCTGGGTCCTGGATGTTCAGGGCACCTCTGGGAAAGAGCACCTGAG
AGTCAACAGCCCAGCTCTTGGGACCAGAACTGAGTACAAGGAGTTGACTTCACAGGAGACATTT
GGTGAGGAAGATCCCCAGGGATCTGAGCCAGTAGAAGCCTGTGACCACATCAGGAAGTCAGAGG
GGAGCCTGGAAAAGCTAGTGGAGCAGAGAGGCCCCAGGGCAGTCACACTGACCAATGGGGAGAG
CAGCAGGGAGTCTGGGGGAAACCTCAGGTTGCTGTCAAGACCTGTTCCTGATCAGAGACCTCAC
AAATGTGATATATGTGAGCAAAGTTTTGAACAGAGATCATATCTCAACAACCATAAGCGTGTAC
ACAGGTCAAAAAAAACAAATACAGTTCGTGACTCTGGGGAAATCTTCAGTGCAAACGTAGTTGT
TAAAGATCAGAAAATTCCTACTGGGAAAAAATTGCATTATTGCAGTTACTGTGGGAAAACATTC
AGGTACAGTGCCAACCTTGTCAAGCATCAGCGGCTTCACACTGAAGAGAAGCCCTACAAATGTG
ATGAGTGTGGGAAAGCCTTCAGCCAGAGCTGCGAGTTCATCAATCACCGAAGGATGCACTCAGG
AGAGATTCCCTACCGGTGTGACGAGTGTGGGAAGACATTCACCCGGAGGCCCAACCTCATGAAG
CACCAGAGGATTCACACTGGGGAGAAACCCTACAAGTGTGGGGAGTGTGGGAAGCACTTTAGCG
CCTACTCTTCCCTGATTTATCACCAGAGAATCCACACCGGAGAGAAACCCTATAAATGTAATGA
CTGCGGGAAAGCCTTCAGTGATGGCTCAATCCTTATCCGACATCGTCGGACTCACACCGGAGAG
AAGCCATTTGAGTGCAAGGAATGTGGCAAAGGCTTTACACAAAGTTCTAACCTTATCCAACATC
AGAGAATTCACACTGGAGAGAAACCCTATAAATGTAATGAATGTGAGAAAGCTTTCATTCAAAA
AACCAAACTCGTGGAACATCAGAGAAGCCACACTGGAGAGAAGCCCTATGAATGCAATGACTGT
GGCAAAGTTTTCAGCCAAAGCACACACCTCATCCAGCACCAGAGAATCCACACAGGAGAGAAGC
CCTACAAGTGCAGCGAGTGTGGGAAGGCCTTCCACAACAGTTCCAGACTCATCCACCACCAGAG
GCTGCACCACGGAGAGAAACCCTACAGATGCAGCGATTGCAAGAAGGCCTTCAGCCAGAGCACG
TACTTGATTCAGCACCGGAGGATCCACACCGGGGAGAAGCCCTACAAGTGCAGCGAGTGTGGGA
AGGCCTTCCGGCACAGTTCCAACATGTGTCAGCATCAGCGGATTCACCTCCGGGAGGACTTCTC
CATGTAACAGTGGCGCGGTGTCCGAGGGCAGAGTCCAGCTGAGCACTTCCTGCATGCGCCCCCG
GCACCTGACTCTGCCCTTTATGTATTATCCACACGATGTTTTCACAGAGTGAAAGGACGTTTCT
CATTAAACAAACCTCTTTTCTTAAATCAAAA

hide sequence

RefSeq Acc Id:

XM_008972721 ⟹ XP_008970969

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	7	162,269,847 - 162,285,184 (-)	NCBI
NHGRI_mPanPan1	8	137,801,412 - 137,817,078 (-)	NCBI
Mhudiblu_PPA_v0	8	141,544,067 - 141,559,787 (-)	NCBI
PanPan1.1	8	144,526,475 - 144,540,948 (-)	NCBI

Sequence:

show sequence

TTCCGGATCGGTTCCGATTGGCGGGGAGGGAGGGCCGAACGGGCGAGGTTGGGCTGCCGTGCTG
CTCGGCGGCGCTGAGGCCAAATAGTTGCATCACATGTATCTAATCCGAGAGTCTCATGCTTCTG
GTAGCTCCTCAGTGACCAGCTCCTGCTCACTGCCCTCAGAAAGCCCAACCCTCAGGCAATGGCG
GCCTTGTTCCTGTCTGCCCCACCCCAGGCCGAGGTGACCTTCGAGGACGTGGCTGTGTACCTCT
CCCGGGAGGAATGGGGCCGCCTGGGCCCTGCTCAGAGGGGCCTCTACAGGGACGTGATGCTGGA
GACCTACGGGAACCTAGTCTCACTGGGAGTAGGACCTGCAGGCCCCAAGCCTGGAGTGATCTCG
CAGTTGGAGCGAGGGGATGAGCCCTGGGTCCTGGATGTTCAGGGCACCTCTGGGAAAGAGCACC
TGAGAGTCAACAGCCCAGCTCTTGGGACCAGAACTGAGTACAAGGAGTTGACTTCACAGGAGAC
ATTTGGTGAGGAAGATCCCCAGGGATCTGAGCCAGTAGAAGCCTGTGACCACATCAGGAAGTCA
GAGGGGAGCCTGGAAAAGCTAGTGGAGCAGAGAGGCCCCAGGGCAGTCACACTGACCAATGGGG
AGAGCAGCAGGGAGTCTGGGGGAAACCTCAGGTTGCTGTCAAGACCTGTTCCTGATCAGAGACC
TCACAAATGTGATATATGTGAGCAAAGTTTTGAACAGAGATCATATCTCAACAACCATAAGCGT
GTACACAGGTCAAAAAAAACAAATACAGTTCGTGACTCTGGGGAAATCTTCAGTGCAAACGTAG
TTGTTAAAGATCAGAAAATTCCTACTGGGAAAAAATTGCATTATTGCAGTTACTGTGGGAAAAC
ATTCAGGTACAGTGCCAACCTTGTCAAGCATCAGCGGCTTCACACTGAAGAGAAGCCCTACAAA
TGTGATGAGTGTGGGAAAGCCTTCAGCCAGAGCTGCGAGTTCATCAATCACCGAAGGATGCACT
CAGGAGAGATTCCCTACCGGTGTGACGAGTGTGGGAAGACATTCACCCGGAGGCCCAACCTCAT
GAAGCACCAGAGGATTCACACTGGGGAGAAACCCTACAAGTGTGGGGAGTGTGGGAAGCACTTT
AGCGCCTACTCTTCCCTGATTTATCACCAGAGAATCCACACCGGAGAGAAACCCTATAAATGTA
ATGACTGCGGGAAAGCCTTCAGTGATGGCTCAATCCTTATCCGACATCGTCGGACTCACACCGG
AGAGAAGCCATTTGAGTGCAAGGAATGTGGCAAAGGCTTTACACAAAGTTCTAACCTTATCCAA
CATCAGAGAATTCACACTGGAGAGAAACCCTATAAATGTAATGAATGTGAGAAAGCTTTCATTC
AAAAAACCAAACTCGTGGAACATCAGAGAAGCCACACTGGAGAGAAGCCCTATGAATGCAATGA
CTGTGGCAAAGTTTTCAGCCAAAGCACACACCTCATCCAGCACCAGAGAATCCACACAGGAGAG
AAGCCCTACAAGTGCAGCGAGTGTGGGAAGGCCTTCCACAACAGTTCCAGACTCATCCACCACC
AGAGGCTGCACCACGGAGAGAAACCCTACAGATGCAGCGATTGCAAGAAGGCCTTCAGCCAGAG
CACGTACTTGATTCAGCACCGGAGGATCCACACCGGGGAGAAGCCCTACAAGTGCAGCGAGTGT
GGGAAGGCCTTCCGGCACAGTTCCAACATGTGTCAGCATCAGCGGATTCACCTCCGGGAGGACT
TCTCCATGTAACAGTGGCGCGGTGTCCGAGGGCAGAGTCCAGCTGAGCACTTCCTGCATGCGCC
CCCGGCACCTGACTCTGCCCTTTATGTATTATCCACACGATGTTTTCACAGAGTGAAAGGACGT
TTCTCATTAAACAAACCTCTTTTCTTAAATCAAAA

hide sequence

RefSeq Acc Id:

XM_034966944 ⟹ XP_034822835

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	7	162,269,847 - 162,284,735 (-)	NCBI
NHGRI_mPanPan1	8	137,801,412 - 137,816,634 (-)	NCBI
Mhudiblu_PPA_v0	8	141,544,601 - 141,559,760 (-)	NCBI

RefSeq Acc Id:

XM_034966946 ⟹ XP_034822837

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	7	162,269,847 - 162,284,735 (-)	NCBI
NHGRI_mPanPan1	8	137,801,412 - 137,816,634 (-)	NCBI
Mhudiblu_PPA_v0	8	141,544,067 - 141,559,733 (-)	NCBI

RefSeq Acc Id:

XM_057302962 ⟹ XP_057158945

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	7	162,269,847 - 162,285,171 (-)	NCBI
NHGRI_mPanPan1	8	137,801,412 - 137,817,067 (-)	NCBI

RefSeq Acc Id:

XM_063606513 ⟹ XP_063462583

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	7	162,269,847 - 162,283,548 (-)	NCBI

RefSeq Acc Id:

XM_063606514 ⟹ XP_063462584

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	7	162,269,847 - 162,283,546 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008970968	(Get FASTA)	NCBI Sequence Viewer
	XP_008970969	(Get FASTA)	NCBI Sequence Viewer
	XP_034822835	(Get FASTA)	NCBI Sequence Viewer
	XP_034822837	(Get FASTA)	NCBI Sequence Viewer
	XP_057158945	(Get FASTA)	NCBI Sequence Viewer
	XP_063462583	(Get FASTA)	NCBI Sequence Viewer
	XP_063462584	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000019127
	ENSPPAP00000019127.1

RefSeq Acc Id:

XP_008970968 ⟸ XM_008972720

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLLLLSDQLLLTALRKPNPQAMAALFLSAPPQAEVTFEDVAVYLSREEWGRLGPAQRGLYRDVM
LETYGNLVSLGVGPAGPKPGVISQLERGDEPWVLDVQGTSGKEHLRVNSPALGTRTEYKELTSQ
ETFGEEDPQGSEPVEACDHIRKSEGSLEKLVEQRGPRAVTLTNGESSRESGGNLRLLSRPVPDQ
RPHKCDICEQSFEQRSYLNNHKRVHRSKKTNTVRDSGEIFSANVVVKDQKIPTGKKLHYCSYCG
KTFRYSANLVKHQRLHTEEKPYKCDECGKAFSQSCEFINHRRMHSGEIPYRCDECGKTFTRRPN
LMKHQRIHTGEKPYKCGECGKHFSAYSSLIYHQRIHTGEKPYKCNDCGKAFSDGSILIRHRRTH
TGEKPFECKECGKGFTQSSNLIQHQRIHTGEKPYKCNECEKAFIQKTKLVEHQRSHTGEKPYEC
NDCGKVFSQSTHLIQHQRIHTGEKPYKCSECGKAFHNSSRLIHHQRLHHGEKPYRCSDCKKAFS
QSTYLIQHRRIHTGEKPYKCSECGKAFRHSSNMCQHQRIHLREDFSM

hide sequence

RefSeq Acc Id:	XP_008970969 ⟸ XM_008972721
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9AP39 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAALFLSAPPQAEVTFEDVAVYLSREEWGRLGPAQRGLYRDVMLETYGNLVSLGVGPAGPKPGV ISQLERGDEPWVLDVQGTSGKEHLRVNSPALGTRTEYKELTSQETFGEEDPQGSEPVEACDHIR KSEGSLEKLVEQRGPRAVTLTNGESSRESGGNLRLLSRPVPDQRPHKCDICEQSFEQRSYLNNH KRVHRSKKTNTVRDSGEIFSANVVVKDQKIPTGKKLHYCSYCGKTFRYSANLVKHQRLHTEEKP YKCDECGKAFSQSCEFINHRRMHSGEIPYRCDECGKTFTRRPNLMKHQRIHTGEKPYKCGECGK HFSAYSSLIYHQRIHTGEKPYKCNDCGKAFSDGSILIRHRRTHTGEKPFECKECGKGFTQSSNL IQHQRIHTGEKPYKCNECEKAFIQKTKLVEHQRSHTGEKPYECNDCGKVFSQSTHLIQHQRIHT GEKPYKCSECGKAFHNSSRLIHHQRLHHGEKPYRCSDCKKAFSQSTYLIQHRRIHTGEKPYKCS ECGKAFRHSSNMCQHQRIHLREDFSM hide sequence

RefSeq Acc Id:	XP_034822837 ⟸ XM_034966946
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9AP39 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034822835 ⟸ XM_034966944
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSPPAP00000019127 ⟸ ENSPPAT00000041878

RefSeq Acc Id:	XP_057158945 ⟸ XM_057302962
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063462583 ⟸ XM_063606513
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063462584 ⟸ XM_063606514
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9AP39 (UniProtKB/TrEMBL)

Protein Domains

C2H2-type KRAB

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000032742	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000041878.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.140	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	KRAB	UniProtKB/TrEMBL
	KRAB_dom_sf	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	ZNF34	ENTREZGENE
PANTHER	KRAB DOMAIN C2H2 ZINC FINGER	UniProtKB/TrEMBL
	KRAB DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
PROSITE	KRAB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	KRAB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF109640	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A2R9AP39	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar