LYRM1 (LYR motif containing 1) - Rat Genome Database

Name: LYRM1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: LYRM1 (LYR motif containing 1) Pan paniscus

Analyze

Symbol:

LYRM1

Name:

LYR motif containing 1

RGD ID:

11850952

Description:

FOUND IN midbody (inferred); mitochondrion (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LYR motif-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LYRM1 (LYR motif containing 1)	NCBI	Ortholog
Mus musculus (house mouse):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LYRM1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LYRM1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LYRM1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Lyrm1 (LYR motif containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	22,067,620 - 22,092,306 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	26,588,243 - 26,612,863 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,712 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	20,931,197 - 20,956,100 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	20,946,553 - 20,956,100 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

midbody (IEA)

mitochondrion (IEA)

nucleoplasm (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

LYRM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	22,067,620 - 22,092,306 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	26,588,243 - 26,612,863 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,712 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	20,931,197 - 20,956,100 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	20,946,553 - 20,956,100 (+)	Ensembl	panpan1.1		panPan2

LYRM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	20,899,882 - 20,925,006 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	20,899,868 - 20,925,006 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	20,911,204 - 20,936,328 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	20,819,927 - 20,843,829 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	20,221,438 - 20,246,212 (+)	NCBI		Celera
Cytogenetic Map	16	p12.3	NCBI
HuRef	16	19,446,825 - 19,471,594 (+)	NCBI		HuRef
CHM1_1	16	20,998,787 - 21,023,554 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	20,830,796 - 20,855,920 (+)	NCBI		T2T-CHM13v2.0

Lyrm1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	119,495,038 - 119,515,979 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	119,495,084 - 119,556,186 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	119,895,713 - 119,916,756 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	119,895,861 - 119,956,963 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	127,039,806 - 127,060,264 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	119,687,441 - 119,707,899 (+)	NCBI		MGSCv36	mm8
Celera	7	119,815,577 - 119,836,052 (+)	NCBI		Celera
Cytogenetic Map	7	F2	NCBI
cM Map	7	64.31	NCBI

Lyrm1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	183,715,941 - 183,736,406 (+)	NCBI		GRCr8
mRatBN7.2	1	174,284,116 - 174,305,053 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	174,284,602 - 174,305,053 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	182,600,704 - 182,620,566 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	189,786,746 - 189,806,606 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	182,522,290 - 182,542,138 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	189,665,401 - 189,685,842 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	189,665,976 - 189,685,842 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	196,599,679 - 196,620,114 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	178,216,553 - 178,265,367 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	172,034,533 - 172,054,364 (+)	NCBI		Celera
Cytogenetic Map	1	q35	NCBI

Lyrm1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955493	186,550 - 208,082 (+)	NCBI	ChiLan1.0	ChiLan1.0

LYRM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	24,428,461 - 24,460,291 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	24,441,307 - 24,460,331 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	25,868,397 - 25,900,268 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	24,596,569 - 24,616,327 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	24,596,569 - 24,616,221 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	24,385,331 - 24,417,333 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	24,280,573 - 24,312,447 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	24,664,537 - 24,696,557 (-)	NCBI		UU_Cfam_GSD_1.0

Lyrm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	118,071,166 - 118,092,805 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	6,168,838 - 6,190,667 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	6,168,844 - 6,189,987 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LYRM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	25,126,270 - 25,136,889 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	25,130,150 - 25,152,012 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	25,917,676 - 25,938,678 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LYRM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	19,036,212 - 19,060,619 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	19,037,083 - 19,060,751 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	10,845,582 - 10,870,314 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lyrm1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624782	7,063,261 - 7,071,530 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624782	7,049,918 - 7,079,714 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008964467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008964468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008964469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008964470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008964471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014341702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055100141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055100142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055100143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055100145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055100146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057300035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057300036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000039862 ⟹ ENSPPAP00000017162

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	16	20,946,553 - 20,956,100 (+)	Ensembl

RefSeq Acc Id:

XM_008964467 ⟹ XP_008962715

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,024 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,592 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,367 (-)	NCBI
PanPan1.1	16	20,931,976 - 20,956,100 (+)	NCBI

Sequence:

show sequence

GGAGGAGCTCAGCTTATTGTTGGATGCGGCGGGAGATGGGTAGAGTCAGTCAGTCGAGACTCCC
CCAGACCTGGAACTGGTGCTCCCACAGAGGTGGGCCCGGTGGTTTGGTCCGGCCTGGCCTACTG
GACCAGCCTGTGCTCGGTCGGCCACGGCTCTGCTGGGCTCCTGGCGCCGCCTCCTCCCAGCCCG
CCGCGGGCTGCGCGCTTCTGTGGGTGGGGGAAGGCAGGACTGACGCAGAATGACAACGGCAACA
CGACAAGAAGTCCTTGGCCTCTACCGCAGCATTTTCAGGCTTGCGAGGAAATGGCAGGCGACAT
CAGGGCAGATGGAAGACACCATCAAAGAAAAACAGTACATACTAAATGAAGCCAGAACGCTGTT
CCGGAAAAACAAAAATCTCACGGACACAGACCTAATTAAACAGTGTATAGATGAATGCACAGCC
AGGATTGAAATTGGACTGCATTACAAGATTCCTTACCCAAGGCCAATTCATCTGCCTCCAATGG
GCCTTACCCCACTCCGAGGCCGGGGACTTCGAAGCCAAGAGAAACTGAGGAAACTTTCCAAACC
AGTATATCTCAGATCTCATGATGAAGTTTCCTAATCTAGAGGAAAGTTTATTTCTGCAAATGAT
GAGCCAACTAGTTATTGAATGTAAACCAGATGGCAAAACACTTCTTGATTAGGGGCAAAAATTC
AAATGTCTTCTTAAAACCTCCACAATTGATTCTCCCCCTGTGATGTGCACTTAGATATCCCTAG
AGTTTCTCAGCATCTTTCTTCCTGAGTGGATGGCATTATCCCTAGAGGTCATGGACCTTACATC
CTCACTGCAGTCACCTTTGGAAACAAGACCGAGGCCTGTAGAAGGAAAGTGGAAGGGTGTAAGA
GCTGTTTTGGGAATTCCATTCACCACACATGCCAGCTGATGCAAAGAAATTTGCCAGTCACTGG
AAGTTACTGTGGCTACTATAAAACTATGTACCACTCTCAGAATATTCTTAGGCTCTTTTTTTTT
TCAAGTTATAGATTTGCTTAAAGTGAGGTTTTTTGGTGTGTGCTTTTTTGTTGTCTTTTGACCC
TTCCAGTTTCCAGACAAACTTGTCTTAAAAAGTGCATCATTGGATTGACCATGGTTTTTCATGA
AATTTTATGAGATTTCTGCCTTAACAAAATGCATATATTCCTTATCTTAAAGCCTGTCATTACT
TAGGATGCACTTATAGGATCTGAAAAGCTCACTTTAAACTCATACTACATTCATTACGAGTATT
TTACGTTAACATAATTGAAAAGTACAAGGTCCAAGCTGGCTTTCAAATTATGTTTAAACAGAAA
TGGGACAAACAGACTTGAAAATAGAAGGGATTTATTCCATCCCTGCAAGGGTAGAGTCAGGTGA
GAGTCCCTTGGTGAGTCATTTGTACATCAGTGTCATTTCTTCTTAACCTCTGAAGAAGATGGGC
ATCAGAAATAAAGACAAAGCACTATCAA

hide sequence

RefSeq Acc Id:

XM_008964468 ⟹ XP_008962716

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,047 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,602 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,367 (-)	NCBI
PanPan1.1	16	20,931,973 - 20,956,100 (+)	NCBI

Sequence:

show sequence

GGAGGAGGAGCTCAGCTTATTGTTGGATGCGGCGGGAGATGGGTAGAGTCAGTCAGTCGAGACT
CCCCCAGACCTGGAACTGGTGCTCCCACAGAGGTGGGCCCGGTGGTTTGGTCCGGCCTGGCCTA
CTGGACCAGCCTGTGCTCGGTCGGCCACGGCTCTGCTGGGCTCCTGGCGCCGCCTCCTCCCAGC
CCGCCGCGGGCTGCGCGCTTCTGTGGGTGGGGGAAGGCAGGACTGACGCAGAAGAGTACCCAGA
GAAGGAGAAGCCAGCAAAGGAGACGACACAGACAAGACCTCAGAGATCAAAGGAAGAGGCCCCT
TAATATCCTGGAATAATGGGACCCATCCCCGTAATCAGTGAATCTCATCCACCCGCTTGCCAGC
TTCTACCGGCAGCAAGTAGAAGCTAAGTCCTGGCTCAAATCTCTTCCCTCCCTCCCTCTCCCAG
CTGTCAGTGCTTTTGGACTTGTGCTCAGATGACAACGGCAACACGACAAGAAGTCCTTGGCCTC
TACCGCAGCATTTTCAGGCTTGCGAGGAAATGGCAGGCGACATCAGGGCAGATGGAAGACACCA
TCAAAGAAAAACAGTACATACTAAATGAAGCCAGAACGCTGTTCCGGAAAAACAAAAATCTCAC
GGACACAGACCTAATTAAACAGTGTATAGATGAATGCACAGCCAGGATTGAAATTGGACTGCAT
TACAAGATTCCTTACCCAAGGCCAATTCATCTGCCTCCAATGGGCCTTACCCCACTCCGAGGCC
GGGGACTTCGAAGCCAAGAGAAACTGAGGAAACTTTCCAAACCAGTATATCTCAGATCTCATGA
TGAAGTTTCCTAATCTAGAGGAAAGTTTATTTCTGCAAATGATGAGCCAACTAGTTATTGAATG
TAAACCAGATGGCAAAACACTTCTTGATTAGGGGCAAAAATTCAAATGTCTTCTTAAAACCTCC
ACAATTGATTCTCCCCCTGTGATGTGCACTTAGATATCCCTAGAGTTTCTCAGCATCTTTCTTC
CTGAGTGGATGGCATTATCCCTAGAGGTCATGGACCTTACATCCTCACTGCAGTCACCTTTGGA
AACAAGACCGAGGCCTGTAGAAGGAAAGTGGAAGGGTGTAAGAGCTGTTTTGGGAATTCCATTC
ACCACACATGCCAGCTGATGCAAAGAAATTTGCCAGTCACTGGAAGTTACTGTGGCTACTATAA
AACTATGTACCACTCTCAGAATATTCTTAGGCTCTTTTTTTTTTCAAGTTATAGATTTGCTTAA
AGTGAGGTTTTTTGGTGTGTGCTTTTTTGTTGTCTTTTGACCCTTCCAGTTTCCAGACAAACTT
GTCTTAAAAAGTGCATCATTGGATTGACCATGGTTTTTCATGAAATTTTATGAGATTTCTGCCT
TAACAAAATGCATATATTCCTTATCTTAAAGCCTGTCATTACTTAGGATGCACTTATAGGATCT
GAAAAGCTCACTTTAAACTCATACTACATTCATTACGAGTATTTTACGTTAACATAATTGAAAA
GTACAAGGTCCAAGCTGGCTTTCAAATTATGTTTAAACAGAAATGGGACAAACAGACTTGAAAA
TAGAAGGGATTTATTCCATCCCTGCAAGGGTAGAGTCAGGTGAGAGTCCCTTGGTGAGTCATTT
GTACATCAGTGTCATTTCTTCTTAACCTCTGAAGAAGATGGGCATCAGAAATAAAGACAAAGCA
CTATCAA

hide sequence

RefSeq Acc Id:

XM_008964469 ⟹ XP_008962717

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,067,699 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,254 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,697 (-)	NCBI
PanPan1.1	16	20,931,772 - 20,956,100 (+)	NCBI

Sequence:

show sequence

AGCTCCAGGAGGGAGAATGGGAGAGGGGCAAGGAGGGAACGAGTGGAAGATTGCGTCACGACGC
ACATAAAGACGTACGAAGCCGTCGCCAAAGAGTACCCAGAGAAGGAGAAGCCAGCAAAGGAGAC
GACACAGACAAGACCTCAGAGATCAAAGGAAGAGGCCCCTTAATATCCTGGAATAATGGGACCC
ATCCCCGTAATCAGTGAATCTCATCCACCCGCTTGCCAGCTTCTACCGGCAGCAAGTAGAAGCT
AAGTCCTGGCTCAAATCTCTTCCCTCCCTCCCTCTCCCAGCTGTCAGTGCTTTTGGACTTGTGC
TCAGATGACAACGGCAACACGACAAGAAGTCCTTGGCCTCTACCGCAGCATTTTCAGGCTTGCG
AGGAAATGGCAGGCGACATCAGGGCAGATGGAAGACACCATCAAAGAAAAACAGTACATACTAA
ATGAAGCCAGAACGCTGTTCCGGAAAAACAAAAATCTCACGGACACAGACCTAATTAAACAGTG
TATAGATGAATGCACAGCCAGGATTGAAATTGGACTGCATTACAAGATTCCTTACCCAAGGCCA
ATTCATCTGCCTCCAATGGGCCTTACCCCACTCCGAGGCCGGGGACTTCGAAGCCAAGAGAAAC
TGAGGAAACTTTCCAAACCAGTATATCTCAGATCTCATGATGAAGTTTCCTAATCTAGAGGAAA
GTTTATTTCTGCAAATGATGAGCCAACTAGTTATTGAATGTAAACCAGATGGCAAAACACTTCT
TGATTAGGGGCAAAAATTCAAATGTCTTCTTAAAACCTCCACAATTGATTCTCCCCCTGTGATG
TGCACTTAGATATCCCTAGAGTTTCTCAGCATCTTTCTTCCTGAGTGGATGGCATTATCCCTAG
AGGTCATGGACCTTACATCCTCACTGCAGTCACCTTTGGAAACAAGACCGAGGCCTGTAGAAGG
AAAGTGGAAGGGTGTAAGAGCTGTTTTGGGAATTCCATTCACCACACATGCCAGCTGATGCAAA
GAAATTTGCCAGTCACTGGAAGTTACTGTGGCTACTATAAAACTATGTACCACTCTCAGAATAT
TCTTAGGCTCTTTTTTTTTTCAAGTTATAGATTTGCTTAAAGTGAGGTTTTTTGGTGTGTGCTT
TTTTGTTGTCTTTTGACCCTTCCAGTTTCCAGACAAACTTGTCTTAAAAAGTGCATCATTGGAT
TGACCATGGTTTTTCATGAAATTTTATGAGATTTCTGCCTTAACAAAATGCATATATTCCTTAT
CTTAAAGCCTGTCATTACTTAGGATGCACTTATAGGATCTGAAAAGCTCACTTTAAACTCATAC
TACATTCATTACGAGTATTTTACGTTAACATAATTGAAAAGTACAAGGTCCAAGCTGGCTTTCA
AATTATGTTTAAACAGAAATGGGACAAACAGACTTGAAAATAGAAGGGATTTATTCCATCCCTG
CAAGGGTAGAGTCAGGTGAGAGTCCCTTGGTGAGTCATTTGTACATCAGTGTCATTTCTTCTTA
ACCTCTGAAGAAGATGGGCATCAGAAATAAAGACAAAGCACTATCAA

hide sequence

RefSeq Acc Id:

XM_008964471 ⟹ XP_008962719

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,492 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,589,045 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,507,901 (-)	NCBI
PanPan1.1	16	20,932,503 - 20,956,100 (+)	NCBI

Sequence:

show sequence

GTAAATGGGAGATGGTAGGGGCCGGTCCGGGGGCGAGAGGTTTCTGGCTGGGGAACGTTGACCC
ACACCAGGTCCCGTACAGGAACGGAGACTCCCTAGCACCGTGAGAGCCAGCTTCGTAATTCTCT
TGCTCTTCAAACCTGAGAGTAGGGTGTTGCTCCGTTACCTTCCATTCGTGTGCAGGAGAGAGTT
AAGTAAATCAATAAAGAAGGTATCAGCAAGTGAGAAATGCCCCCCAAAGACCGGATGAGGTGAC
AGAAGATGGGGGGAGGGCCCCTCGAAATCGGATGACAACGGCAACACGACAAGAAGTCCTTGGC
CTCTACCGCAGCATTTTCAGGCTTGCGAGGAAATGGCAGGCGACATCAGGGCAGATGGAAGACA
CCATCAAAGAAAAACAGTACATACTAAATGAAGCCAGAACGCTGTTCCGGAAAAACAAAAATCT
CACGGACACAGACCTAATTAAACAGTGTATAGATGAATGCACAGCCAGGATTGAAATTGGACTG
CATTACAAGATTCCTTACCCAAGGCCAATTCATCTGCCTCCAATGGGCCTTACCCCACTCCGAG
GCCGGGGACTTCGAAGCCAAGAGAAACTGAGGAAACTTTCCAAACCAGTATATCTCAGATCTCA
TGATGAAGTTTCCTAATCTAGAGGAAAGTTTATTTCTGCAAATGATGAGCCAACTAGTTATTGA
ATGTAAACCAGATGGCAAAACACTTCTTGATTAGGGGCAAAAATTCAAATGTCTTCTTAAAACC
TCCACAATTGATTCTCCCCCTGTGATGTGCACTTAGATATCCCTAGAGTTTCTCAGCATCTTTC
TTCCTGAGTGGATGGCATTATCCCTAGAGGTCATGGACCTTACATCCTCACTGCAGTCACCTTT
GGAAACAAGACCGAGGCCTGTAGAAGGAAAGTGGAAGGGTGTAAGAGCTGTTTTGGGAATTCCA
TTCACCACACATGCCAGCTGATGCAAAGAAATTTGCCAGTCACTGGAAGTTACTGTGGCTACTA
TAAAACTATGTACCACTCTCAGAATATTCTTAGGCTCTTTTTTTTTTCAAGTTATAGATTTGCT
TAAAGTGAGGTTTTTTGGTGTGTGCTTTTTTGTTGTCTTTTGACCCTTCCAGTTTCCAGACAAA
CTTGTCTTAAAAAGTGCATCATTGGATTGACCATGGTTTTTCATGAAATTTTATGAGATTTCTG
CCTTAACAAAATGCATATATTCCTTATCTTAAAGCCTGTCATTACTTAGGATGCACTTATAGGA
TCTGAAAAGCTCACTTTAAACTCATACTACATTCATTACGAGTATTTTACGTTAACATAATTGA
AAAGTACAAGGTCCAAGCTGGCTTTCAAATTATGTTTAAACAGAAATGGGACAAACAGACTTGA
AAATAGAAGGGATTTATTCCATCCCTGCAAGGGTAGAGTCAGGTGAGAGTCCCTTGGTGAGTCA
TTTGTACATCAGTGTCATTTCTTCTTAACCTCTGAAGAAGATGGGCATCAGAAATAAAGACAAA
GCACTATCAA

hide sequence

RefSeq Acc Id:

XM_014341702 ⟹ XP_014197188

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,354 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,909 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,507,901 (-)	NCBI
PanPan1.1	16	20,932,503 - 20,956,100 (+)	NCBI

Sequence:

show sequence

GTAAATGGGAGATGGTAGGGGCCGGTCCGGGGGCGAGAGGTTTCTGGCTGGGGAACGTTGACCC
ACACCAGGTCCCGTACAGGAACGGAGACTCCCTAGCACCGTGAGAGCCAGCTTCGTAATTCTCT
TGCTCTTCAAACCTGAGAGTAGGGTGTTGCTCCGTTACCTTCCATTCGTGTGCAGGAGAGAGTT
AAGTAAATCAATAAAGAAGGTATCAGCAAGTGAGAAATGCCCCCCAAAGACCGGATGAGGTGAC
AGAAGATGGGGGGAGGGCCCCTCGAAATCGGAGAGTACCCAGAGAAGGAGAAGCCAGCAAAGGA
GACGACACAGACAAGACCTCAGAGATCAAAGGAAGAGGCCCCTTAATATCCTGGAATAATGGGA
CCCATCCCCGTAATCAGTGAATCTCATCCACCCGCTTGCCAGCTTCTACCGGCAGCAAGTAGAA
GCTAAGTCCTGGCTCAAATCTCTTCCCTCCCTCCCTCTCCCAGCTGTCAGTGCTTTTGGACTTG
TGCTCAGATGACAACGGCAACACGACAAGAAGTCCTTGGCCTCTACCGCAGCATTTTCAGGCTT
GCGAGGAAATGGCAGGCGACATCAGGGCAGATGGAAGACACCATCAAAGAAAAACAGTACATAC
TAAATGAAGCCAGAACGCTGTTCCGGAAAAACAAAAATCTCACGGACACAGACCTAATTAAACA
GTGTATAGATGAATGCACAGCCAGGATTGAAATTGGACTGCATTACAAGATTCCTTACCCAAGG
CCAATTCATCTGCCTCCAATGGGCCTTACCCCACTCCGAGGCCGGGGACTTCGAAGCCAAGAGA
AACTGAGGAAACTTTCCAAACCAGTATATCTCAGATCTCATGATGAAGTTTCCTAATCTAGAGG
AAAGTTTATTTCTGCAAATGATGAGCCAACTAGTTATTGAATGTAAACCAGATGGCAAAACACT
TCTTGATTAGGGGCAAAAATTCAAATGTCTTCTTAAAACCTCCACAATTGATTCTCCCCCTGTG
ATGTGCACTTAGATATCCCTAGAGTTTCTCAGCATCTTTCTTCCTGAGTGGATGGCATTATCCC
TAGAGGTCATGGACCTTACATCCTCACTGCAGTCACCTTTGGAAACAAGACCGAGGCCTGTAGA
AGGAAAGTGGAAGGGTGTAAGAGCTGTTTTGGGAATTCCATTCACCACACATGCCAGCTGATGC
AAAGAAATTTGCCAGTCACTGGAAGTTACTGTGGCTACTATAAAACTATGTACCACTCTCAGAA
TATTCTTAGGCTCTTTTTTTTTTCAAGTTATAGATTTGCTTAAAGTGAGGTTTTTTGGTGTGTG
CTTTTTTGTTGTCTTTTGACCCTTCCAGTTTCCAGACAAACTTGTCTTAAAAAGTGCATCATTG
GATTGACCATGGTTTTTCATGAAATTTTATGAGATTTCTGCCTTAACAAAATGCATATATTCCT
TATCTTAAAGCCTGTCATTACTTAGGATGCACTTATAGGATCTGAAAAGCTCACTTTAAACTCA
TACTACATTCATTACGAGTATTTTACGTTAACATAATTGAAAAGTACAAGGTCCAAGCTGGCTT
TCAAATTATGTTTAAACAGAAATGGGACAAACAGACTTGAAAATAGAAGGGATTTATTCCATCC
CTGCAAGGGTAGAGTCAGGTGAGAGTCCCTTGGTGAGTCATTTGTACATCAGTGTCATTTCTTC
TTAACCTCTGAAGAAGATGGGCATCAGAAATAAAGACAAAGCACTATCAA

hide sequence

RefSeq Acc Id:

XM_034939919 ⟹ XP_034795810

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,238 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,789 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,172 (-)	NCBI

RefSeq Acc Id:

XM_034939920 ⟹ XP_034795811

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,067,620 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,243 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,712 (-)	NCBI

RefSeq Acc Id:

XM_034939921 ⟹ XP_034795812

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,297 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,856 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,068 (-)	NCBI

RefSeq Acc Id:

XM_034939923 ⟹ XP_034795814

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,328 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,883 - 26,612,863 (+)	NCBI
Mhudiblu_PPA_v0	16	17,484,091 - 17,508,073 (-)	NCBI

RefSeq Acc Id:

XM_055100141 ⟹ XP_054956116

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,047 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,602 - 26,612,863 (+)	NCBI

RefSeq Acc Id:

XM_055100142 ⟹ XP_054956117

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,362 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,917 - 26,612,863 (+)	NCBI

RefSeq Acc Id:

XM_055100143 ⟹ XP_054956118

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,361 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,916 - 26,612,863 (+)	NCBI

RefSeq Acc Id:

XM_055100145 ⟹ XP_054956120

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,380 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,935 - 26,612,863 (+)	NCBI

RefSeq Acc Id:

XM_055100146 ⟹ XP_054956121

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,372 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,927 - 26,612,863 (+)	NCBI

RefSeq Acc Id:

XM_057300035 ⟹ XP_057156018

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,067,699 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,254 - 26,612,863 (+)	NCBI

RefSeq Acc Id:

XM_057300036 ⟹ XP_057156019

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	18	22,068,002 - 22,092,306 (+)	NCBI
NHGRI_mPanPan1	16	26,588,557 - 26,612,863 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008962715	(Get FASTA)	NCBI Sequence Viewer
	XP_008962716	(Get FASTA)	NCBI Sequence Viewer
	XP_008962717	(Get FASTA)	NCBI Sequence Viewer
	XP_008962719	(Get FASTA)	NCBI Sequence Viewer
	XP_014197188	(Get FASTA)	NCBI Sequence Viewer
	XP_034795810	(Get FASTA)	NCBI Sequence Viewer
	XP_034795811	(Get FASTA)	NCBI Sequence Viewer
	XP_034795812	(Get FASTA)	NCBI Sequence Viewer
	XP_034795814	(Get FASTA)	NCBI Sequence Viewer
	XP_054956116	(Get FASTA)	NCBI Sequence Viewer
	XP_054956117	(Get FASTA)	NCBI Sequence Viewer
	XP_054956118	(Get FASTA)	NCBI Sequence Viewer
	XP_054956120	(Get FASTA)	NCBI Sequence Viewer
	XP_054956121	(Get FASTA)	NCBI Sequence Viewer
	XP_057156018	(Get FASTA)	NCBI Sequence Viewer
	XP_057156019	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000017162
	ENSPPAP00000017162.1

RefSeq Acc Id:	XP_008962717 ⟸ XM_008964469
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCI DECTARIEIGLHYKIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKLSKPVYLRSHDEVS hide sequence

RefSeq Acc Id:	XP_008962716 ⟸ XM_008964468
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCI DECTARIEIGLHYKIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKLSKPVYLRSHDEVS hide sequence

RefSeq Acc Id:	XP_008962715 ⟸ XM_008964467
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCI DECTARIEIGLHYKIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKLSKPVYLRSHDEVS hide sequence

RefSeq Acc Id:	XP_014197188 ⟸ XM_014341702
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCI DECTARIEIGLHYKIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKLSKPVYLRSHDEVS hide sequence

RefSeq Acc Id:	XP_008962719 ⟸ XM_008964471
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTATRQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCI DECTARIEIGLHYKIPYPRPIHLPPMGLTPLRGRGLRSQEKLRKLSKPVYLRSHDEVS hide sequence

RefSeq Acc Id:	XP_034795811 ⟸ XM_034939920
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034795810 ⟸ XM_034939919
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034795814 ⟸ XM_034939923
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034795812 ⟸ XM_034939921
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000017162 ⟸ ENSPPAT00000039862

RefSeq Acc Id:	XP_054956116 ⟸ XM_055100141
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054956118 ⟸ XM_055100143
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054956117 ⟸ XM_055100142
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054956121 ⟸ XM_055100146
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054956120 ⟸ XM_055100145
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_057156018 ⟸ XM_057300035
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_057156019 ⟸ XM_057300036
- UniProtKB:	A0A2R9AIH7 (UniProtKB/TrEMBL)

Protein Domains

Complex 1 LYR protein

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000031659	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000039862.1	UniProtKB/TrEMBL
InterPro	Complex1_LYR	UniProtKB/TrEMBL
	Complex1_LYR_LYRM1	UniProtKB/TrEMBL
	LYRM1	UniProtKB/TrEMBL
KEGG Report	pps:100967862	UniProtKB/TrEMBL
NCBI Gene	LYRM1	ENTREZGENE
PANTHER	LYR MOTIF-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	PTHR14273	UniProtKB/TrEMBL
Pfam	Complex1_LYR	UniProtKB/TrEMBL
UniProt	A0A2R9AIH7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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