RASIP1 (Ras interacting protein 1) - Rat Genome Database

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Gene: RASIP1 (Ras interacting protein 1) Pan paniscus
Analyze
Symbol: RASIP1
Name: Ras interacting protein 1
RGD ID: 11841172
Description: ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); negative regulation of autophagy (ortholog); negative regulation of membrane permeability (ortholog); FOUND IN protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100975869; LOC106634120; ras-interacting protein 1; ras-interacting protein 1-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,823,848 - 54,843,803 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,750,190 - 56,770,147 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,720,179 - 45,740,131 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11954,311,649 - 54,318,585 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RASIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,823,848 - 54,843,803 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,750,190 - 56,770,147 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,720,179 - 45,740,131 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11954,311,649 - 54,318,585 (-)NCBIpanpan1.1PanPan1.1panPan2
RASIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,720,585 - 48,740,610 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,720,585 - 48,740,610 (-)EnsemblGRCh38hg38GRCh38
GRCh371949,223,842 - 49,243,867 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,915,654 - 53,935,782 (-)NCBINCBI36Build 36hg18NCBI36
Build 341953,915,653 - 53,935,782NCBI
Celera1946,089,934 - 46,110,062 (-)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,603,007 - 45,622,781 (-)NCBIHuRef
CHM1_11949,225,580 - 49,245,732 (-)NCBICHM1_1
T2T-CHM13v2.01951,715,002 - 51,735,029 (-)NCBIT2T-CHM13v2.0
Rasip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,276,961 - 45,288,516 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,276,912 - 45,288,517 (+)EnsemblGRCm39 Ensembl
GRCm38745,627,537 - 45,639,092 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,627,488 - 45,639,093 (+)EnsemblGRCm38mm10GRCm38
MGSCv37752,882,907 - 52,894,462 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,495,579 - 45,507,134 (+)NCBIMGSCv36mm8
Celera741,089,079 - 41,100,635 (+)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.39NCBI
Rasip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,233,599 - 105,246,028 (+)NCBIGRCr8
mRatBN7.2196,097,135 - 96,109,564 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,091,074 - 96,109,562 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,482,573 - 101,495,002 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01109,955,274 - 109,967,703 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,245,644 - 103,258,074 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,609,209 - 101,621,648 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,610,773 - 101,621,646 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,687,843 - 102,700,428 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,097,668 - 96,108,543 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,174,114 - 96,186,654 (+)NCBI
Celera190,352,345 - 90,363,220 (+)NCBICelera
Cytogenetic Map1q22NCBI
Rasip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555591,831,123 - 1,843,905 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555591,830,574 - 1,844,107 (+)NCBIChiLan1.0ChiLan1.0
RASIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,583,169 - 107,597,683 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,581,424 - 107,597,682 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,105,550 - 107,119,765 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,107,785 - 108,121,968 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,107,111 - 108,121,992 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,774,623 - 107,788,818 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,421,540 - 107,435,931 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,257,120 - 108,271,542 (+)NCBIUU_Cfam_GSD_1.0
Rasip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,125,378 - 21,137,442 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366642,743,564 - 2,754,395 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366642,743,568 - 2,754,618 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,058,759 - 54,072,459 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,058,748 - 54,072,415 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,806,097 - 49,819,876 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RASIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,970,704 - 41,997,951 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl641,991,176 - 41,996,155 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607321,840,051 - 21,860,422 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rasip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248325,177,092 - 5,189,471 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248325,176,697 - 5,189,673 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034946821   ⟹   XP_034802712
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,823,848 - 54,843,803 (-)NCBI
NHGRI_mPanPan11956,750,190 - 56,770,147 (-)NCBI
Mhudiblu_PPA_v01945,720,179 - 45,740,131 (-)NCBI
RefSeq Acc Id: XM_034946822   ⟹   XP_034802713
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22054,823,848 - 54,843,803 (-)NCBI
NHGRI_mPanPan11956,750,197 - 56,770,147 (-)NCBI
Mhudiblu_PPA_v01945,720,190 - 45,740,131 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034802712 (Get FASTA)   NCBI Sequence Viewer  
  XP_034802713 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000007812.1
Reference Protein Sequences
RefSeq Acc Id: XP_034802712   ⟸   XM_034946821
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034802713   ⟸   XM_034946822
- Peptide Label: isoform X2
Protein Domains
Dilute


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000027129 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000030422.1 UniProtKB/TrEMBL
InterPro Dilute_dom UniProtKB/TrEMBL
NCBI Gene LOC100975869 ENTREZGENE
PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W UniProtKB/TrEMBL
  RAS-INTERACTING PROTEIN 1 UniProtKB/TrEMBL
Pfam DIL UniProtKB/TrEMBL
PROSITE DILUTE UniProtKB/TrEMBL
SMART DIL UniProtKB/TrEMBL
UniProt A0A2R8ZY00_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-01 RASIP1  Ras interacting protein 1  LOC100975869  ras-interacting protein 1  Symbol and/or name change 5135510 APPROVED
2020-06-11 LOC100975869  ras-interacting protein 1  LOC106634120  ras-interacting protein 1-like  Data merged from RGD:11886749 737654 PROVISIONAL