MCF2 (MCF.2 cell line derived transforming sequence)

Gene: MCF2 (MCF.2 cell line derived transforming sequence) Pan paniscus

Analyze

Symbol:

MCF2

Name:

MCF.2 cell line derived transforming sequence

RGD ID:

11829467

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); dendrite development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Failure to Thrive (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

proto-oncogene DBL

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	139,031,267 - 139,143,551 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	139,034,869 - 139,147,149 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	128,737,271 - 128,848,384 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	138,985,456 - 139,047,015 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	138,984,632 - 139,096,066 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Failure to Thrive (ISO)

genetic disease (ISO)

hemophilia B (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to leukemia inhibitory factor (IEA,ISO)

dendrite development (IEA,ISO)

intracellular signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

Molecular Function

guanyl-nucleotide exchange factor activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

MCF2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	139,031,267 - 139,143,551 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	139,034,869 - 139,147,149 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	128,737,271 - 128,848,384 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	138,985,456 - 139,047,015 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	138,984,632 - 139,096,066 (-)	Ensembl	panpan1.1		panPan2

MCF2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	139,581,770 - 139,708,167 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	139,581,770 - 139,708,216 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	138,663,929 - 138,790,326 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	138,491,596 - 138,618,047 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	138,389,449 - 138,450,372	NCBI
Celera	X	139,031,369 - 139,157,817 (-)	NCBI		Celera
Cytogenetic Map	X	q27.1	NCBI
HuRef	X	127,931,315 - 128,057,565 (-)	NCBI		HuRef
CHM1_1	X	138,574,821 - 138,701,280 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	137,890,836 - 138,020,159 (-)	NCBI		T2T-CHM13v2.0

Mcf2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	59,101,316 - 59,224,546 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	59,101,316 - 59,224,449 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	60,055,956 - 60,179,184 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	60,055,956 - 60,179,089 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	57,309,133 - 57,400,820 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	56,402,743 - 56,494,427 (-)	NCBI		MGSCv36	mm8
Celera	X	46,495,004 - 46,586,548 (-)	NCBI		Celera
Cytogenetic Map	X	A6	NCBI
cM Map	X	33.5	NCBI

Mcf2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	143,444,510 - 143,550,839 (-)	NCBI		GRCr8
mRatBN7.2	X	138,414,077 - 138,514,828 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	138,409,256 - 138,514,446 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	X	143,159,071 - 143,292,467 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	143,154,209 - 143,274,180 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	143,188,541 - 143,236,007 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	145,597,430 - 145,693,790 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	134,485,013 - 134,591,931 (-)	NCBI		Celera
Cytogenetic Map	X	q36	NCBI

Mcf2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955489	5,665,530 - 5,709,891 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955489	5,613,310 - 5,715,688 (+)	NCBI	ChiLan1.0	ChiLan1.0

MCF2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	109,543,609 - 109,627,265 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	109,545,245 - 109,627,260 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	95,370,950 - 95,454,589 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	111,530,138 - 111,601,036 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	111,530,151 - 111,601,032 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	108,664,168 - 108,747,786 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	110,848,683 - 110,932,293 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	110,528,154 - 110,611,768 (-)	NCBI		UU_Cfam_GSD_1.0

Mcf2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	107,580,518 - 107,707,380 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936513	7,922,700 - 8,034,793 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936513	7,950,082 - 8,035,421 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MCF2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	114,258,074 - 114,356,156 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	114,258,082 - 114,356,106 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	130,456,205 - 130,575,812 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MCF2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	114,670,397 - 114,795,400 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	114,670,454 - 114,776,957 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	52,394,633 - 52,527,358 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mcf2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624808	7,009,996 - 7,116,804 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624808	7,010,020 - 7,116,752 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003812302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003812303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003812305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003812307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008964704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008964705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034949775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034949776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057301078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057301079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000045697 ⟹ ENSPPAP00000022883

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	138,984,632 - 139,096,066 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000045703 ⟹ ENSPPAP00000022889

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	138,984,632 - 139,096,066 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000045708 ⟹ ENSPPAP00000022893

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	138,984,632 - 139,047,221 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000045718 ⟹ ENSPPAP00000022903

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	138,985,456 - 139,047,010 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000045720 ⟹ ENSPPAP00000022905

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	138,985,456 - 139,047,010 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000045721 ⟹ ENSPPAP00000022906

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	138,986,160 - 139,055,889 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000045724 ⟹ ENSPPAP00000022909

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	X	138,988,078 - 139,039,481 (-)	Ensembl

RefSeq Acc Id:

XM_003812303 ⟹ XP_003812351

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,094,427 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,098,033 (-)	NCBI
Mhudiblu_PPA_v0	X	128,737,271 - 128,799,250 (-)	NCBI
PanPan1.1	X	138,985,456 - 139,047,015 (-)	NCBI

Sequence:

show sequence

TTTTTTTCCTCCTCCTTCCACTCTTAGGACATGCCTGATCTTCTTGAGCAGTCCAGCACAAGCT
AATCCACAAGGTTCAATCAGGCTAAGTAATTGGAGGAATGTGTTAACTCTGAATTACAAGGAGC
AGAAGGGAAGGATCTGTCAGCTGACTAATCAGGGATAGTTGGTTTTTTTTTTTTTTTTTTTTTC
TCCCCAGCATTGCTGCCACTGTGCTAATGGAAGCAGCCACGGCAGCTTTGTTTGATAGAGATTT
TTGGCTGCCGTTTTTAAATACTACCCAAGAAGCAGCTCGTATTTCATCAATGTTGCGTTGACAA
TTGGAAAAGAAGAGTGTAATTGCGTACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAG
ATGAGGTTCAGAAGGAATGCGGCTTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTTACGTC
CTACCAGCTTTCTTCAACGAACGTTCACAGACATTGGATTTTGGTTTAGTCAGGAGGATTTTAT
GCTTAAATTACCAGTTGTTATGCTGAGCTCAGTTAGTGATTTGCTGACATACATTGATGACAAG
CAATTAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGAATGGATCATCTTCAGAA
ATGCTATAGAAAATTTTGCCCTCACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTTTGGAAC
TGAACTGGCTGAGACAGAACTACCAGATGATATTCCCTCAATAGAAGAAATTCTGGCAATTCGT
GCTGAAAGGTATCATCTGTTGAAGAATGACATTACAGCTGTAACCAAAGAAGGAAAAATTCTGC
TAACAAATCTGGAAGTGCCTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAATGTCATCGGCA
AATAAGTGGTGACTGGCAAACTATTAATAAGTTGCTGACTCAAGTACATGATATGGAAACAGCT
TTTGATGGATTTTGGGAAAAACATCAATTAAAAATGGAGCAGTATCTGCAACTATGGAAGTTTG
AGGAGGATTTTCAACAGCTTGTGACTGAAGTTGAATTTCTATTAAACCAACAAGCAGAACTGGC
TGATGTAACAGGGACTATAGCTCAAGTAAAACAAAAAATAAAAAAATTGGAAAACTTAGATGAA
AATTCTCAGGAGCTATTATCAAAGGCCCAGTTTGTGATATTACATGGACACAAGCTTGCAGCAA
ATCACCATTATGCACTTGATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACCTTTCTGATAT
TTTGGTTAATGAGATAAAAGCAAAACGGATACAACTCAGCAGGACCTTCAAAATGCATAAACTC
CTACAGCAGGCTCGTCAATGCTGTGATGAAGGGGAATGTCTTCTAGCTAATCAGGAAATAGATA
AGTTTCAGTCTAAAGAAGATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTTCTTGAAATGGC
TCTACCCTTTATAAATTATGAACCTGAAACACTGCAGTATGAATTTGATGTAATATTATCTCCT
GAGCTTAAGGTTCAAATGAAGACTATACAACTCAAGCTTGAAAACATTCGAAGTATATTTGAAA
ACCAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACC
CACACCTGAAAATTTGGTCACATCTGGAACACCATTTTTTTCATCTAAACAAGTGGGAGTTGGA
TACTCTTTCTTTCAAGCATGTAAACTTTTTTCAAAAGGGAAGAAGACTTGGAGACAAAATCAGA
GCAACTTAAAAATTGAAGTGGTGCATGATTGTCAGGAGAAGAGAAGTTCTGGTCAATCCTCCAG
TTTGGACAATGGCAATAGCTTGGATGTTTTAAAGAACCATGTACTAAATGAACTGATACAGACT
GAGAGAGTTTATGTTCGAGAACTGTATACTGTTTTGTTGGGTTATAGAGCGGAGATGGATAATC
CAGAGATGTTTGATCTTATGCCACCTCTCCTGAGAAATAAAAAGGACATTCTCTTTGGAAACAT
GGCAGAAATATATGAATTCCATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTGCTCATGCT
CCAGAAAGAGTGGGACCTTGTTTCCTGGAAAGGAAGGATGATTTTCAGATGTATGCAAAATATT
GTCAGAATAAGCCCAGATCAGAAACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTCCAGGA
ATGTCAAAGGAAGTTAAAACACAGACTTAGACTGGATTCCTATTTACTCAAACCAGTGCAACGA
ATCACTAAATATCAGTTATTGTTGAAGGAGCTATTAAAATATAGCAAAGACTGTGAAGGATCTG
CTCTGTTGAAGAAGGCACTCGATGCAATGCTGGATTTACTGAAGTCAGTTAATGATTCTATGCA
TCAGATTGCAATAAATGGCTATATTGGAAACTTAAATGAACTGGGCAAGATGATAATGCAAGGT
GGATTCAGCGTTTGGATAGGGCACAAGAAATGTGCTACAAAAATGAAGGATTTGGCTAGATTCA
AACCAATGCAGCGACACCTTTTCTTGTATGAAAAAGCCATTGTTTTTTGCAAAAGGCGTGTTGA
AAGTGGAGAAGGCTCTGATAGATACCCGTCATACAGTTTTAAACACTGTTGGAAAATGGATGAA
GTTGGAATCACTGAATATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTATGGTGAAAAGG
AAGAAGTTTATATTGTCCAGGCTTCTAATGTAGATGTGAAGATGACGTGGCTAAAAGAAATAAG
AAATATTTTGTTGAAGCAGCAGGAACTTTTGACAGTTAAAAAAAGAAAGCAACAGGATCAATTA
ACAGAACGGGATAAGTTTCAGATTTCTCTTCAGCAGAATGATGAAAAGCAACAGGGAGCTTTTG
TAAGTACTGAGGAAACTGAATTGGAACACACCAACACTGTGGTGGAGGTCTGTGAGGCAATTGC
ATCAGTTCAGGCAGAAGCAAATACAGTTTGGACTGAGGCATCACAATCTGCAGAAATCTCTGAA
GAACCTGCGGAATGGTCAAGCAACTATTTCTACCCTACTTATGATGAAAATGAAGAAGAAAATA
GGCCCCTCATGAGACCTGTGTCGGAGATGGCTCTCCTATATTGATGAAGCTACTATGTCAAATG
GCAAGTAGCTCTTTCCTGCCAGCTTCTCAGCTCATTTGGAAAAATACTGCGCAAAAGACATTGA
GCTCAAATGATGCAGATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTT
CTTTTCTTTCATTTAATAAAGCTTTTAATGATGGTACGCTATCTTTTTAAAATCATGTATTTAA
TGTGTCAGATATTGCGCTTGAAAGATTCTCATCTCAGAATACTTTTGGACTTGAAAATTATTTC
TTCTCTACTTTGTAACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTTATTAATGAATTAA
GTCAAAATTACGGCTGCAAAATTGCTAAGGTCAAGTAAAGCACAACATTATGATTTAATATGCT
TTTATTGAAACCACAGCTTTTGTGCCCATCATTTTAACCTGTGTGAAACAATACAAAGCCCAGA
AATTCTTTTCGGGGCATGAGTAAATTTTGTTCAGGGCTACTGTCTGTGTGTGCCCAGATAAAAT
TTTCATGAGAGTAGTTTACAAAAGCCGTATTTAAAAGTTAATATTTTCACACATTTTTTTCTGG
ATTTCTGCTTATAATTAATGTAACTTAAATTAGTTGTGCTCTGCTATTTTCTGTATATTTCATG
TTGTAATTCTTTTTTTCAAATAAAAATTAATTCTTCAGGTTAAA

hide sequence

RefSeq Acc Id:

XM_003812307 ⟹ XP_003812355

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,094,427 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,098,034 (-)	NCBI
Mhudiblu_PPA_v0	X	128,737,271 - 128,799,250 (-)	NCBI
PanPan1.1	X	138,985,456 - 139,046,990 (-)	NCBI

Sequence:

show sequence

AGGACATGCCTGATCTTCTTGAGCAGTCCAGCACAAGCTAATCCACAAGGTTCAATCAGGCTAA
GTAATTGGAGGAATGTGTTAACTCTGAATTACAAGGAGCAGAAGGGAAGGATCTGTCAGCTGAC
TAATCAGGGATAGTTGGTTTTTTTTTTTTTTTTTTTTTCTCCCCAGCATTGCTGCCACTGTGCT
AATGGAAGCAGCCACGGCAGCTTTGTTTGATAGAGATTTTTGGCTGCCGTTTTTAAATACTACC
CAAGAAGCAGCTCGTATTTCATCAATGTTGCGTTGACAATTGGAAAAGAAGAGTGTAATTGCGT
ACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGAAGGAATGCGGCTT
CCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTTACGTCCTACCAGCTTTCTTCAACGAACGTT
CACAGACATTGGATTTTGGTTTAGTCAGGAGGATTTTATGCTTAAATTACCAGCTATAGAAAAT
TTTGCCCTCACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTTTGGAACTGAACTGGCTGAGA
CAGAACTACCAGATGATATTCCCTCAATAGAAGAAATTCTGGCAATTCGTGCTGAAAGGTATCA
TCTGTTGAAGAATGACATTACAGCTGTAACCAAAGAAGGAAAAATTCTGCTAACAAATCTGGAA
GTGCCTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGGTGACT
GGCAAACTATTAATAAGTTGCTGACTCAAGTACATGATATGGAAACAGCTTTTGATGGATTTTG
GGAAAAACATCAATTAAAAATGGAGCAGTATCTGCAACTATGGAAGTTTGAGGAGGATTTTCAA
CAGCTTGTGACTGAAGTTGAATTTCTATTAAACCAACAAGCAGAACTGGCTGATGTAACAGGGA
CTATAGCTCAAGTAAAACAAAAAATAAAAAAATTGGAAAACTTAGATGAAAATTCTCAGGAGCT
ATTATCAAAGGCCCAGTTTGTGATATTACATGGACACAAGCTTGCAGCAAATCACCATTATGCA
CTTGATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACCTTTCTGATATTTTGGTTAATGAGA
TAAAAGCAAAACGGATACAACTCAGCAGGACCTTCAAAATGCATAAACTCCTACAGCAGGCTCG
TCAATGCTGTGATGAAGGGGAATGTCTTCTAGCTAATCAGGAAATAGATAAGTTTCAGTCTAAA
GAAGATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTTCTTGAAATGGCTCTACCCTTTATAA
ATTATGAACCTGAAACACTGCAGTATGAATTTGATGTAATATTATCTCCTGAGCTTAAGGTTCA
AATGAAGACTATACAACTCAAGCTTGAAAACATTCGAAGTATATTTGAAAACCAGCAGGCTGGT
TTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATT
TGGTCACATCTGGAACACCATTTTTTTCATCTAAACAAGGGAAGAAGACTTGGAGACAAAATCA
GAGCAACTTAAAAATTGAAGTGGTGCATGATTGTCAGGAGAAGAGAAGTTCTGGTCAATCCTCC
AGTTTGGACAATGGCAATAGCTTGGATGTTTTAAAGAACCATGTACTAAATGAACTGATACAGA
CTGAGAGAGTTTATGTTCGAGAACTGTATACTGTTTTGTTGGGTTATAGAGCGGAGATGGATAA
TCCAGAGATGTTTGATCTTATGCCACCTCTCCTGAGAAATAAAAAGGACATTCTCTTTGGAAAC
ATGGCAGAAATATATGAATTCCATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTGCTCATG
CTCCAGAAAGAGTGGGACCTTGTTTCCTGGAAAGGAAGGATGATTTTCAGATGTATGCAAAATA
TTGTCAGAATAAGCCCAGATCAGAAACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTCCAG
GAATGTCAAAGGAAGTTAAAACACAGACTTAGACTGGATTCCTATTTACTCAAACCAGTGCAAC
GAATCACTAAATATCAGTTATTGTTGAAGGAGCTATTAAAATATAGCAAAGACTGTGAAGGATC
TGCTCTGTTGAAGAAGGCACTCGATGCAATGCTGGATTTACTGAAGTCAGTTAATGATTCTATG
CATCAGATTGCAATAAATGGCTATATTGGAAACTTAAATGAACTGGGCAAGATGATAATGCAAG
GTGGATTCAGCGTTTGGATAGGGCACAAGAAATGTGCTACAAAAATGAAGGATTTGGCTAGATT
CAAACCAATGCAGCGACACCTTTTCTTGTATGAAAAAGCCATTGTTTTTTGCAAAAGGCGTGTT
GAAAGTGGAGAAGGCTCTGATAGATACCCGTCATACAGTTTTAAACACTGTTGGAAAATGGATG
AAGTTGGAATCACTGAATATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTATGGTGAAAA
GGAAGAAGTTTATATTGTCCAGGCTTCTAATGTAGATGTGAAGATGACGTGGCTAAAAGAAATA
AGAAATATTTTGTTGAAGCAGCAGGAACTTTTGACAGTTAAAAAAAGAAAGCAACAGGATCAAT
TAACAGAACGGGATAAGTTTCAGATTTCTCTTCAGCAGAATGATGAAGACCTGTGTCGGAGATG
GCTCTCCTATATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTCTTTCCTGCCAGCTTCTCA
GCTCATTTGGAAAAATACTGCGCAAAAGACATTGAGCTCAAATGATGCAGATGTTGTTTTCAGG
TTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCATTTAATAAAGCTTTTAAT
GATGGTACGCTATCTTTTTAAAATCATGTATTTAATGTGTCAGATATTGCGCTTGAAAGATTCT
CATCTCAGAATACTTTTGGACTTGAAAATTATTTCTTCTCTACTTTGTAACCAAATGCAATCGG
TGTGCCTTGGATTATTTAGTTTATTAATGAATTAAGTCAAAATTACGGCTGCAAAATTGCTAAG
GTCAAGTAAAGCACAACATTATGATTTAATATGCTTTTATTGAAACCACAGCTTTTGTGCCCAT
CATTTTAACCTGTGTGAAACAATACAAAGCCCAGAAATTCTTTTCGGGGCATGAGTAAATTTTG
TTCAGGGCTACTGTCTGTGTGTGCCCAGATAAAATTTTCATGAGAGTAGTTTACAAAAGCCGTA
TTTAAAAGTTAATATTTTCACACATTTTTTTCTGGATTTCTGCTTATAATTAATGTAACTTAAA
TTAGTTGTGCTCTGCTATTTTCTGTATATTTCATGTTGTAATTCTTTTTTTCAAATAAAAATTA
ATTCTTCAGGTTAAA

hide sequence

RefSeq Acc Id:

XM_008964704 ⟹ XP_008962952

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,094,428 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,098,040 (-)	NCBI
Mhudiblu_PPA_v0	X	128,738,016 - 128,799,251 (-)	NCBI
PanPan1.1	X	138,986,406 - 139,047,015 (-)	NCBI

Sequence:

show sequence

TTTTTTTCCTCCTCCTTCCACTCTTAGGACATGCCTGATCTTCTTGAGCAGTCCAGCACAAGCT
AATCCACAAGGTTCAATCAGGCTAAGTAATTGGAGGAATGTGTTAACTCTGAATTACAAGGAGC
AGAAGGGAAGGATCTGTCAGCTGACTAATCAGGGATAGTTGGTTTTTTTTTTTTTTTTTTTTTC
TCCCCAGCATTGCTGCCACTGTGCTAATGGAAGCAGCCACGGCAGCTTTGTTTGATAGAGATTT
TTGGCTGCCGTTTTTAAATACTACCCAAGAAGCAGCTCGTATTTCATCAATGTTGCGTTGACAA
TTGGAAAAGAAGAGTGTAATTGCGTACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAG
ATGAGGTTCAGAAGGAATGCGGCTTCCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTTACGTC
CTACCAGCTTTCTTCAACGAACGTTCACAGACATTGGATTTTGGTTTAGTCAGGAGGATTTTAT
GCTTAAATTACCAGTTGTTATGCTGAGCTCAGTTAGTGATTTGCTGACATACATTGATGACAAG
CAATTAACCCCTGAGTTAGGCGGCACCTTGCAGTACTGCCACAGTGAATGGATCATCTTCAGAA
ATGCTATAGAAAATTTTGCCCTCACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTTTGGAAC
TGAACTGGCTGAGACAGAACTACCAGATGATATTCCCTCAATAGAAGAAATTCTGGCAATTCGT
GCTGAAAGGTATCATCTGTTGAAGAATGACATTACAGCTGTAACCAAAGAAGGAAAAATTCTGC
TAACAAATCTGGAAGTGCCTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAATGTCATCGGCA
AATAAGTGGTGACTGGCAAACTATTAATAAGTTGCTGACTCAAGTACATGATATGGAAACAGCT
TTTGATGGATTTTGGGAAAAACATCAATTAAAAATGGAGCAGTATCTGCAACTATGGAAGTTTG
AGGAGGATTTTCAACAGCTTGTGACTGAAGTTGAATTTCTATTAAACCAACAAGCAGAACTGGC
TGATGTAACAGGGACTATAGCTCAAGTAAAACAAAAAATAAAAAAATTGGAAAACTTAGATGAA
AATTCTCAGGAGCTATTATCAAAGGCCCAGTTTGTGATATTACATGGACACAAGCTTGCAGCAA
ATCACCATTATGCACTTGATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACCTTTCTGATAT
TTTGGTTAATGAGATAAAAGCAAAACGGATACAACTCAGCAGGACCTTCAAAATGCATAAACTC
CTACAGCAGGCTCGTCAATGCTGTGATGAAGGGGAATGTCTTCTAGCTAATCAGGAAATAGATA
AGTTTCAGTCTAAAGAAGATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTTCTTGAAATGGC
TCTACCCTTTATAAATTATGAACCTGAAACACTGCAGTATGAATTTGATGTAATATTATCTCCT
GAGCTTAAGGTTCAAATGAAGACTATACAACTCAAGCTTGAAAACATTCGAAGTATATTTGAAA
ACCAGCAGGCTGGTTTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACC
CACACCTGAAAATTTGGTCACATCTGGAACACCATTTTTTTCATCTAAACAAGTGGGAGTTGGA
TACTCTTTCTTTCAAGCATGTAAACTTTTTTCAAAAGGGAAGAAGACTTGGAGACAAAATCAGA
GCAACTTAAAAATTGAAGTGGTGCATGATTGTCAGGAGAAGAGAAGTTCTGGTCAATCCTCCAG
TTTGGACAATGGCAATAGCTTGGATGTTTTAAAGAACCATGTACTAAATGAACTGATACAGACT
GAGAGAGTTTATGTTCGAGAACTGTATACTGTTTTGTTGGGTTATAGAGCGGAGATGGATAATC
CAGAGATGTTTGATCTTATGCCACCTCTCCTGAGAAATAAAAAGGACATTCTCTTTGGAAACAT
GGCAGAAATATATGAATTCCATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTGCTCATGCT
CCAGAAAGAGTGGGACCTTGTTTCCTGGAAAGGAAGGATGATTTTCAGATGTATGCAAAATATT
GTCAGAATAAGCCCAGATCAGAAACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTCCAGGA
ATGTCAAAGGAAGTTAAAACACAGACTTAGACTGGATTCCTATTTACTCAAACCAGTGCAACGA
ATCACTAAATATCAGTTATTGTTGAAGGAGCTATTAAAATATAGCAAAGACTGTGAAGGATCTG
CTCTGTTGAAGAAGGCACTCGATGCAATGCTGGATTTACTGAAGTCAGTTAATGATTCTATGCA
TCAGATTGCAATAAATGGCTATATTGGAAACTTAAATGAACTGGGCAAGATGATAATGCAAGGT
GGATTCAGCGTTTGGATAGGGCACAAGAAATGTGCTACAAAAATGAAGGATTTGGCTAGATTCA
AACCAATGCAGCGACACCTTTTCTTGTATGAAAAAGCCATTGTTTTTTGCAAAAGGCGTGTTGA
AAGTGGAGAAGGCTCTGATAGATACCCGTCATACAGTTTTAAACACTGTTGGAAAATGGATGAA
GTTGGAATCACTGAATATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTATGGTGAAAAGG
AAGAAGTTTATATTGTCCAGGCTTCTAATGTAGATGTGAAGATGACGTGGCTAAAAGAAATAAG
AAATATTTTGTTGAAGCAGCAGGAACTTTTGACAGTTAAAAAAAGAAAGCAACAGGATCAATTA
ACAGAACGGGATAAGTTTCAGATTTCTCTTCAGCAGAATGATGAAAAGCAACAGGGAGCTTTTG
TAAGTACTGAGGAAACTGAATTGGAACACACCAACACTGTGGTGGAGGTCTGTGAGGCAATTGC
ATCAGTTCAGGCAGAAGCAAATACAGTTTGGACTGAGGCATCACAATCTGCAGAAATCTCTGAA
GAACCTGCGGAATGGTCAAGCAACTATTTCTACCCTACTTATGATGAAAATGAAGAAGAAAATA
GGCCCCTCATGCTATGGTATCAGAAGATAAAGTAAATATGCAAAATTGAAGAATGCTTTAATCA
CA

hide sequence

RefSeq Acc Id:

XM_008964705 ⟹ XP_008962953

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,094,425 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,098,031 (-)	NCBI
Mhudiblu_PPA_v0	X	128,737,271 - 128,799,249 (-)	NCBI
PanPan1.1	X	138,985,456 - 139,046,990 (-)	NCBI

Sequence:

show sequence

AGGACATGCCTGATCTTCTTGAGCAGTCCAGCACAAGCTAATCCACAAGGTTCAATCAGGCTAA
GTAATTGGAGGAATGTGTTAACTCTGAATTACAAGGAGCAGAAGGGAAGGATCTGTCAGCTGAC
TAATCAGGGATAGTTGGTTTTTTTTTTTTTTTTTTTTTCTCCCCAGCATTGCTGCCACTGTGCT
AATGGAAGCAGCCACGGCAGCTTTGTTTGATAGAGATTTTTGGCTGCCGTTTTTAAATACTACC
CAAGAAGCAGCTCGTATTTCATCAATGTTGCGTTGACAATTGGAAAAGAAGAGTGTAATTGCGT
ACAGGCGAAATGGCAGAAGCAAATCCCCGGAGAGGCAAGATGAGGTTCAGAAGGAATGCGGCTT
CCTTCCCTGGGAACTTGCACTTGGTTTTGGTTTTACGTCCTACCAGCTTTCTTCAACGAACGTT
CACAGACATTGGATTTTGGTTTAGTCAGGAGGATTTTATGCTTAAATTACCAGCTATAGAAAAT
TTTGCCCTCACAGTGAAAGAAATGGCTCAGATGTTACAGTCCTTTGGAACTGAACTGGCTGAGA
CAGAACTACCAGATGATATTCCCTCAATAGAAGAAATTCTGGCAATTCGTGCTGAAAGGTATCA
TCTGTTGAAGAATGACATTACAGCTGTAACCAAAGAAGGAAAAATTCTGCTAACAAATCTGGAA
GTGCCTGACACTGAAGGAGCTGTCAGTTCAAGACTAGAATGTCATCGGCAAATAAGTGGTGACT
GGCAAACTATTAATAAGTTGCTGACTCAAGTACATGATATGGAAACAGCTTTTGATGGATTTTG
GGAAAAACATCAATTAAAAATGGAGCAGTATCTGCAACTATGGAAGTTTGAGGAGGATTTTCAA
CAGCTTGTGACTGAAGTTGAATTTCTATTAAACCAACAAGCAGAACTGGCTGATGTAACAGGGA
CTATAGCTCAAGTAAAACAAAAAATAAAAAAATTGGAAAACTTAGATGAAAATTCTCAGGAGCT
ATTATCAAAGGCCCAGTTTGTGATATTACATGGACACAAGCTTGCAGCAAATCACCATTATGCA
CTTGATTTAATCTGCCAGAGGTGCAATGAGCTACGTTACCTTTCTGATATTTTGGTTAATGAGA
TAAAAGCAAAACGGATACAACTCAGCAGGACCTTCAAAATGCATAAACTCCTACAGCAGGCTCG
TCAATGCTGTGATGAAGGGGAATGTCTTCTAGCTAATCAGGAAATAGATAAGTTTCAGTCTAAA
GAAGATGCTCAGAAAGCTCTCCAAGACATTGAAAATTTTCTTGAAATGGCTCTACCCTTTATAA
ATTATGAACCTGAAACACTGCAGTATGAATTTGATGTAATATTATCTCCTGAGCTTAAGGTTCA
AATGAAGACTATACAACTCAAGCTTGAAAACATTCGAAGTATATTTGAAAACCAGCAGGCTGGT
TTCAGGAACCTGGCAGATAAGCATGTGAGGCCAATCCAATTTGTGGTACCCACACCTGAAAATT
TGGTCACATCTGGAACACCATTTTTTTCATCTAAACAAGTGGGAGTTGGATACTCTTTCTTTCA
AGCATGTAAACTTTTTTCAAAAGGGAAGAAGACTTGGAGACAAAATCAGAGCAACTTAAAAATT
GAAGTGGTGCATGATTGTCAGGAGAAGAGAAGTTCTGGTCAATCCTCCAGTTTGGACAATGGCA
ATAGCTTGGATGTTTTAAAGAACCATGTACTAAATGAACTGATACAGACTGAGAGAGTTTATGT
TCGAGAACTGTATACTGTTTTGTTGGGTTATAGAGCGGAGATGGATAATCCAGAGATGTTTGAT
CTTATGCCACCTCTCCTGAGAAATAAAAAGGACATTCTCTTTGGAAACATGGCAGAAATATATG
AATTCCATAACGACATTTTCTTGAGCAGCCTGGAAAATTGTGCTCATGCTCCAGAAAGAGTGGG
ACCTTGTTTCCTGGAAAGGAAGGATGATTTTCAGATGTATGCAAAATATTGTCAGAATAAGCCC
AGATCAGAAACAATTTGGAGGAAGTATTCAGAATGCGCATTTTTCCAGGAATGTCAAAGGAAGT
TAAAACACAGACTTAGACTGGATTCCTATTTACTCAAACCAGTGCAACGAATCACTAAATATCA
GTTATTGTTGAAGGAGCTATTAAAATATAGCAAAGACTGTGAAGGATCTGCTCTGTTGAAGAAG
GCACTCGATGCAATGCTGGATTTACTGAAGTCAGTTAATGATTCTATGCATCAGATTGCAATAA
ATGGCTATATTGGAAACTTAAATGAACTGGGCAAGATGATAATGCAAGGTGGATTCAGCGTTTG
GATAGGGCACAAGAAATGTGCTACAAAAATGAAGGATTTGGCTAGATTCAAACCAATGCAGCGA
CACCTTTTCTTGTATGAAAAAGCCATTGTTTTTTGCAAAAGGCGTGTTGAAAGTGGAGAAGGCT
CTGATAGATACCCGTCATACAGTTTTAAACACTGTTGGAAAATGGATGAAGTTGGAATCACTGA
ATATGTAAAAGGTGATAACCGCAAGTTTGAAATCTGGTATGGTGAAAAGGAAGAAGTTTATATT
GTCCAGGCTTCTAATGTAGATGTGAAGATGACGTGGCTAAAAGAAATAAGAAATATTTTGTTGA
AGCAGCAGGAACTTTTGACAGTTAAAAAAAGAAAGCAACAGGATCAATTAACAGAACGGGATAA
GTTTCAGATTTCTCTTCAGCAGAATGATGAAAAGCAACAGGGAGCTTTTGTAAGTACTGAGGAA
ACTGAATTGGAACACACCAACACTGTGGTGGAGGTCTGTGAGGCAATTGCATCAGTTCAGGCAG
AAGCAAATACAGTTTGGACTGAGGCATCACAATCTGCAGAAATCTCTGAAGAACCTGCGGAATG
GTCAAGCAACTATTTCTACCCTACTTATGATGAAAATGAAGAAGAAAATAGGCCCCTCATGAGA
CCTGTGTCGGAGATGGCTCTCCTATATTGATGAAGCTACTATGTCAAATGGCAAGTAGCTCTTT
CCTGCCAGCTTCTCAGCTCATTTGGAAAAATACTGCGCAAAAGACATTGAGCTCAAATGATGCA
GATGTTGTTTTCAGGTTAATGGACACGCAAAGAAACCACAGCACATACTTCTTTTCTTTCATTT
AATAAAGCTTTTAATGATGGTACGCTATCTTTTTAAAATCATGTATTTAATGTGTCAGATATTG
CGCTTGAAAGATTCTCATCTCAGAATACTTTTGGACTTGAAAATTATTTCTTCTCTACTTTGTA
ACCAAATGCAATCGGTGTGCCTTGGATTATTTAGTTTATTAATGAATTAAGTCAAAATTACGGC
TGCAAAATTGCTAAGGTCAAGTAAAGCACAACATTATGATTTAATATGCTTTTATTGAAACCAC
AGCTTTTGTGCCCATCATTTTAACCTGTGTGAAACAATACAAAGCCCAGAAATTCTTTTCGGGG
CATGAGTAAATTTTGTTCAGGGCTACTGTCTGTGTGTGCCCAGATAAAATTTTCATGAGAGTAG
TTTACAAAAGCCGTATTTAAAAGTTAATATTTTCACACATTTTTTTCTGGATTTCTGCTTATAA
TTAATGTAACTTAAATTAGTTGTGCTCTGCTATTTTCTGTATATTTCATGTTGTAATTCTTTTT
TTCAAATAAAAATTAATTCTTCAGGTTAAA

hide sequence

RefSeq Acc Id:

XM_034949775 ⟹ XP_034805666

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,143,551 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,147,149 (-)	NCBI
Mhudiblu_PPA_v0	X	128,737,271 - 128,848,384 (-)	NCBI

RefSeq Acc Id:

XM_034949776 ⟹ XP_034805667

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,143,548 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,147,147 (-)	NCBI
Mhudiblu_PPA_v0	X	128,737,271 - 128,848,381 (-)	NCBI

RefSeq Acc Id:

XM_057301078 ⟹ XP_057157061

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,094,426 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,098,031 (-)	NCBI

RefSeq Acc Id:

XM_057301079 ⟹ XP_057157062

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	X	139,031,267 - 139,094,428 (-)	NCBI
NHGRI_mPanPan1	X	139,034,869 - 139,098,041 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003812351	(Get FASTA)	NCBI Sequence Viewer
	XP_003812355	(Get FASTA)	NCBI Sequence Viewer
	XP_008962952	(Get FASTA)	NCBI Sequence Viewer
	XP_008962953	(Get FASTA)	NCBI Sequence Viewer
	XP_034805666	(Get FASTA)	NCBI Sequence Viewer
	XP_034805667	(Get FASTA)	NCBI Sequence Viewer
	XP_057157061	(Get FASTA)	NCBI Sequence Viewer
	XP_057157062	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000022883.1
	ENSPPAP00000022889.1
	ENSPPAP00000022893
	ENSPPAP00000022893.1
	ENSPPAP00000022903.1
	ENSPPAP00000022905
	ENSPPAP00000022905.1
	ENSPPAP00000022906
	ENSPPAP00000022906.1
	ENSPPAP00000022909.1

RefSeq Acc Id:	XP_003812355 ⟸ XM_003812307
- Peptide Label:	isoform X8
- UniProtKB:	A0A2R9AZY5 (UniProtKB/TrEMBL), A0A2R9B415 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEANPRRGKMRFRRNAASFPGNLHLVLVLRPTSFLQRTFTDIGFWFSQEDFMLKLPAIENFAL TVKEMAQMLQSFGTELAETELPDDIPSIEEILAIRAERYHLLKNDITAVTKEGKILLTNLEVPD TEGAVSSRLECHRQISGDWQTINKLLTQVHDMETAFDGFWEKHQLKMEQYLQLWKFEEDFQQLV TEVEFLLNQQAELADVTGTIAQVKQKIKKLENLDENSQELLSKAQFVILHGHKLAANHHYALDL ICQRCNELRYLSDILVNEIKAKRIQLSRTFKMHKLLQQARQCCDEGECLLANQEIDKFQSKEDA QKALQDIENFLEMALPFINYEPETLQYEFDVILSPELKVQMKTIQLKLENIRSIFENQQAGFRN LADKHVRPIQFVVPTPENLVTSGTPFFSSKQGKKTWRQNQSNLKIEVVHDCQEKRSSGQSSSLD NGNSLDVLKNHVLNELIQTERVYVRELYTVLLGYRAEMDNPEMFDLMPPLLRNKKDILFGNMAE IYEFHNDIFLSSLENCAHAPERVGPCFLERKDDFQMYAKYCQNKPRSETIWRKYSECAFFQECQ RKLKHRLRLDSYLLKPVQRITKYQLLLKELLKYSKDCEGSALLKKALDAMLDLLKSVNDSMHQI AINGYIGNLNELGKMIMQGGFSVWIGHKKCATKMKDLARFKPMQRHLFLYEKAIVFCKRRVESG EGSDRYPSYSFKHCWKMDEVGITEYVKGDNRKFEIWYGEKEEVYIVQASNVDVKMTWLKEIRNI LLKQQELLTVKKRKQQDQLTERDKFQISLQQNDEDLCRRWLSYIDEATMSNGK hide sequence

RefSeq Acc Id:	XP_008962953 ⟸ XM_008964705
- Peptide Label:	isoform X6
- UniProtKB:	A0A2R9B067 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEANPRRGKMRFRRNAASFPGNLHLVLVLRPTSFLQRTFTDIGFWFSQEDFMLKLPAIENFAL TVKEMAQMLQSFGTELAETELPDDIPSIEEILAIRAERYHLLKNDITAVTKEGKILLTNLEVPD TEGAVSSRLECHRQISGDWQTINKLLTQVHDMETAFDGFWEKHQLKMEQYLQLWKFEEDFQQLV TEVEFLLNQQAELADVTGTIAQVKQKIKKLENLDENSQELLSKAQFVILHGHKLAANHHYALDL ICQRCNELRYLSDILVNEIKAKRIQLSRTFKMHKLLQQARQCCDEGECLLANQEIDKFQSKEDA QKALQDIENFLEMALPFINYEPETLQYEFDVILSPELKVQMKTIQLKLENIRSIFENQQAGFRN LADKHVRPIQFVVPTPENLVTSGTPFFSSKQVGVGYSFFQACKLFSKGKKTWRQNQSNLKIEVV HDCQEKRSSGQSSSLDNGNSLDVLKNHVLNELIQTERVYVRELYTVLLGYRAEMDNPEMFDLMP PLLRNKKDILFGNMAEIYEFHNDIFLSSLENCAHAPERVGPCFLERKDDFQMYAKYCQNKPRSE TIWRKYSECAFFQECQRKLKHRLRLDSYLLKPVQRITKYQLLLKELLKYSKDCEGSALLKKALD AMLDLLKSVNDSMHQIAINGYIGNLNELGKMIMQGGFSVWIGHKKCATKMKDLARFKPMQRHLF LYEKAIVFCKRRVESGEGSDRYPSYSFKHCWKMDEVGITEYVKGDNRKFEIWYGEKEEVYIVQA SNVDVKMTWLKEIRNILLKQQELLTVKKRKQQDQLTERDKFQISLQQNDEKQQGAFVSTEETEL EHTNTVVEVCEAIASVQAEANTVWTEASQSAEISEEPAEWSSNYFYPTYDENEEENRPLMRPVS EMALLY hide sequence

RefSeq Acc Id:	XP_003812351 ⟸ XM_003812303
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9B1D6 (UniProtKB/TrEMBL), A0A2R9B067 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEANPRRGKMRFRRNAASFPGNLHLVLVLRPTSFLQRTFTDIGFWFSQEDFMLKLPVVMLSSV SDLLTYIDDKQLTPELGGTLQYCHSEWIIFRNAIENFALTVKEMAQMLQSFGTELAETELPDDI PSIEEILAIRAERYHLLKNDITAVTKEGKILLTNLEVPDTEGAVSSRLECHRQISGDWQTINKL LTQVHDMETAFDGFWEKHQLKMEQYLQLWKFEEDFQQLVTEVEFLLNQQAELADVTGTIAQVKQ KIKKLENLDENSQELLSKAQFVILHGHKLAANHHYALDLICQRCNELRYLSDILVNEIKAKRIQ LSRTFKMHKLLQQARQCCDEGECLLANQEIDKFQSKEDAQKALQDIENFLEMALPFINYEPETL QYEFDVILSPELKVQMKTIQLKLENIRSIFENQQAGFRNLADKHVRPIQFVVPTPENLVTSGTP FFSSKQVGVGYSFFQACKLFSKGKKTWRQNQSNLKIEVVHDCQEKRSSGQSSSLDNGNSLDVLK NHVLNELIQTERVYVRELYTVLLGYRAEMDNPEMFDLMPPLLRNKKDILFGNMAEIYEFHNDIF LSSLENCAHAPERVGPCFLERKDDFQMYAKYCQNKPRSETIWRKYSECAFFQECQRKLKHRLRL DSYLLKPVQRITKYQLLLKELLKYSKDCEGSALLKKALDAMLDLLKSVNDSMHQIAINGYIGNL NELGKMIMQGGFSVWIGHKKCATKMKDLARFKPMQRHLFLYEKAIVFCKRRVESGEGSDRYPSY SFKHCWKMDEVGITEYVKGDNRKFEIWYGEKEEVYIVQASNVDVKMTWLKEIRNILLKQQELLT VKKRKQQDQLTERDKFQISLQQNDEKQQGAFVSTEETELEHTNTVVEVCEAIASVQAEANTVWT EASQSAEISEEPAEWSSNYFYPTYDENEEENRPLMRPVSEMALLY hide sequence

RefSeq Acc Id:	XP_008962952 ⟸ XM_008964704
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R9B415 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEANPRRGKMRFRRNAASFPGNLHLVLVLRPTSFLQRTFTDIGFWFSQEDFMLKLPVVMLSSV SDLLTYIDDKQLTPELGGTLQYCHSEWIIFRNAIENFALTVKEMAQMLQSFGTELAETELPDDI PSIEEILAIRAERYHLLKNDITAVTKEGKILLTNLEVPDTEGAVSSRLECHRQISGDWQTINKL LTQVHDMETAFDGFWEKHQLKMEQYLQLWKFEEDFQQLVTEVEFLLNQQAELADVTGTIAQVKQ KIKKLENLDENSQELLSKAQFVILHGHKLAANHHYALDLICQRCNELRYLSDILVNEIKAKRIQ LSRTFKMHKLLQQARQCCDEGECLLANQEIDKFQSKEDAQKALQDIENFLEMALPFINYEPETL QYEFDVILSPELKVQMKTIQLKLENIRSIFENQQAGFRNLADKHVRPIQFVVPTPENLVTSGTP FFSSKQVGVGYSFFQACKLFSKGKKTWRQNQSNLKIEVVHDCQEKRSSGQSSSLDNGNSLDVLK NHVLNELIQTERVYVRELYTVLLGYRAEMDNPEMFDLMPPLLRNKKDILFGNMAEIYEFHNDIF LSSLENCAHAPERVGPCFLERKDDFQMYAKYCQNKPRSETIWRKYSECAFFQECQRKLKHRLRL DSYLLKPVQRITKYQLLLKELLKYSKDCEGSALLKKALDAMLDLLKSVNDSMHQIAINGYIGNL NELGKMIMQGGFSVWIGHKKCATKMKDLARFKPMQRHLFLYEKAIVFCKRRVESGEGSDRYPSY SFKHCWKMDEVGITEYVKGDNRKFEIWYGEKEEVYIVQASNVDVKMTWLKEIRNILLKQQELLT VKKRKQQDQLTERDKFQISLQQNDEKQQGAFVSTEETELEHTNTVVEVCEAIASVQAEANTVWT EASQSAEISEEPAEWSSNYFYPTYDENEEENRPLMLWYQKIK hide sequence

RefSeq Acc Id:	XP_034805666 ⟸ XM_034949775
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9AZX3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034805667 ⟸ XM_034949776
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9B1C8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSPPAP00000022883 ⟸ ENSPPAT00000045697

RefSeq Acc Id:

ENSPPAP00000022889 ⟸ ENSPPAT00000045703

RefSeq Acc Id:

ENSPPAP00000022893 ⟸ ENSPPAT00000045708

RefSeq Acc Id:

ENSPPAP00000022903 ⟸ ENSPPAT00000045718

RefSeq Acc Id:

ENSPPAP00000022909 ⟸ ENSPPAT00000045724

RefSeq Acc Id:

ENSPPAP00000022906 ⟸ ENSPPAT00000045721

RefSeq Acc Id:

ENSPPAP00000022905 ⟸ ENSPPAT00000045720

RefSeq Acc Id:	XP_057157062 ⟸ XM_057301079
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_057157061 ⟸ XM_057301078
- Peptide Label:	isoform X5

Protein Domains

CRAL-TRIO DH PH

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000034608	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000045697.1	UniProtKB/TrEMBL
	ENSPPAT00000045703.1	UniProtKB/TrEMBL
	ENSPPAT00000045708.1	UniProtKB/TrEMBL
	ENSPPAT00000045718.1	UniProtKB/TrEMBL
	ENSPPAT00000045720.1	UniProtKB/TrEMBL
	ENSPPAT00000045721.1	UniProtKB/TrEMBL
	ENSPPAT00000045724.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.60	UniProtKB/TrEMBL
	1.20.900.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	CRAL-TRIO_dom	UniProtKB/TrEMBL
	CRAL-TRIO_dom_sf	UniProtKB/TrEMBL
	DBL_dom_sf	UniProtKB/TrEMBL
	DH-domain	UniProtKB/TrEMBL
	GDS_CDC24_CS	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
	Spectrin/alpha-actinin	UniProtKB/TrEMBL
NCBI Gene	MCF2	ENTREZGENE
PANTHER	PROTO-ONCOGENE DBL	UniProtKB/TrEMBL
	RHO GUANINE EXCHANGE FACTOR-RELATED	UniProtKB/TrEMBL
Pfam	CRAL_TRIO_2	UniProtKB/TrEMBL
	PF00169	UniProtKB/TrEMBL
	RhoGEF	UniProtKB/TrEMBL
PROSITE	CRAL_TRIO	UniProtKB/TrEMBL
	DH_1	UniProtKB/TrEMBL
	DH_2	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
SMART	RhoGEF	UniProtKB/TrEMBL
	SEC14	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
	SPEC	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	Spectrin repeat	UniProtKB/TrEMBL
	SSF48065	UniProtKB/TrEMBL
	SSF52087	UniProtKB/TrEMBL
UniProt	A0A2R9AZX3	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9AZY5	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9B067	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9B1C8	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9B1D6	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9B1F0_PANPA	UniProtKB/TrEMBL
	A0A2R9B415	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar