RNASE7 (ribonuclease A family member 7) - Rat Genome Database

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Gene: RNASE7 (ribonuclease A family member 7) Pan paniscus
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Symbol: RNASE7
Name: ribonuclease A family member 7
RGD ID: 11826372
Description: ENCODES a protein that exhibits endonuclease activity (inferred); lipopolysaccharide binding (inferred); nucleic acid binding (inferred); INVOLVED IN antibacterial humoral response (inferred); antimicrobial humoral immune response mediated by antimicrobial peptide (inferred); cytolysis in another organism (inferred); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); purine nucleoside phosphorylase deficiency (ortholog); FOUND IN cytoplasm (inferred); extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ribonuclease 7
RGD Orthologs
Human
Chinchilla
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21522,493,933 - 22,495,804 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11421,710,420 - 21,712,291 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0141,857,213 - 1,858,781 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11419,939,117 - 19,941,124 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1419,939,884 - 19,940,354 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RNASE7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21522,493,933 - 22,495,804 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11421,710,420 - 21,712,291 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0141,857,213 - 1,858,781 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11419,939,117 - 19,941,124 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1419,939,884 - 19,940,354 (+)Ensemblpanpan1.1panPan2
RNASE7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381421,042,362 - 21,044,233 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1421,042,316 - 21,044,234 (+)EnsemblGRCh38hg38GRCh38
GRCh371421,510,521 - 21,512,392 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361420,580,225 - 20,582,232 (+)NCBINCBI36Build 36hg18NCBI36
Build 341420,580,250 - 20,582,226NCBI
Celera141,371,249 - 1,373,256 (+)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef141,631,329 - 1,633,336 (+)NCBIHuRef
CHM1_11421,512,500 - 21,514,507 (+)NCBICHM1_1
T2T-CHM13v2.01415,239,769 - 15,241,640 (+)NCBIT2T-CHM13v2.0
Rnase7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555501,796,301 - 1,797,801 (+)NCBIChiLan1.0ChiLan1.0
RNASE7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12921,515,069 - 21,517,963 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605924,918,340 - 24,919,168 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rnase7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248257,036,229 - 7,036,702 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248257,034,523 - 7,036,967 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_057299687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000042972   ⟹   ENSPPAP00000020185
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1419,939,884 - 19,940,354 (+)Ensembl
RefSeq Acc Id: XM_057299687   ⟹   XP_057155670
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21522,493,933 - 22,495,804 (+)NCBI
NHGRI_mPanPan11421,710,420 - 21,712,291 (+)NCBI
Protein Sequences
Protein RefSeqs XP_057155670 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000020185.1
Reference Protein Sequences
RefSeq Acc Id: ENSPPAP00000020185   ⟸   ENSPPAT00000042972
RefSeq Acc Id: XP_057155670   ⟸   XM_057299687
- UniProtKB: A0A2R9AWK5 (UniProtKB/TrEMBL)
Protein Domains
Ribonuclease A-domain


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033312 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000042972.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.130.10 UniProtKB/TrEMBL
InterPro RNaseA UniProtKB/TrEMBL
  RNaseA-like_dom_sf UniProtKB/TrEMBL
  RNaseA_AS UniProtKB/TrEMBL
  RNaseA_domain UniProtKB/TrEMBL
KEGG Report pps:100986347 UniProtKB/TrEMBL
NCBI Gene RNASE7 ENTREZGENE
PANTHER PTHR11437 UniProtKB/TrEMBL
  RIBONUCLEASE 7 UniProtKB/TrEMBL
Pfam RnaseA UniProtKB/TrEMBL
PRINTS RIBONUCLEASE UniProtKB/TrEMBL
PROSITE RNASE_PANCREATIC UniProtKB/TrEMBL
SMART RNAse_Pc UniProtKB/TrEMBL
Superfamily-SCOP SSF54076 UniProtKB/TrEMBL
UniProt A0A2R9AWK5 ENTREZGENE, UniProtKB/TrEMBL