LOC100984344 (calpain-3) - Rat Genome Database

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Gene: LOC100984344 (calpain-3) Pan paniscus
Analyze
Symbol: LOC100984344 (Ensembl: CAPN3)
Name: calpain-3 (Ensembl:calpain 3)
RGD ID: 11785030
Description: ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN myofibril assembly (ortholog); proteolysis (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH Autosomal Dominant Limb-Girdle Muscular Dystrophy Type 4 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); FOUND IN myofibril (ortholog); T-tubule (ortholog); Z disc (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calpain 3; calpain 3, (p94); CAPN3; GANC; glucosidase alpha, neutral C; myb/SANT-like DNA-binding domain-containing protein 7; neutral alpha-glucosidase C; uncharacterized protein LOC100984344
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21631,516,778 - 31,661,908 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11535,671,129 - 35,815,136 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01521,227,371 - 21,372,406 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11539,458,400 - 39,528,820 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1539,386,377 - 39,468,956 (+)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl1539,476,302 - 39,528,820 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC100984344
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21631,516,778 - 31,661,908 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11535,671,129 - 35,815,136 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01521,227,371 - 21,372,406 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11539,458,400 - 39,528,820 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1539,386,377 - 39,468,956 (+)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl1539,476,302 - 39,528,820 (+)Ensemblpanpan1.1panPan2
CAPN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381542,359,501 - 42,412,317 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1542,359,498 - 42,412,949 (+)EnsemblGRCh38hg38GRCh38
GRCh371542,651,699 - 42,704,515 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361540,427,593 - 40,491,807 (+)NCBINCBI36Build 36hg18NCBI36
Build 341540,427,592 - 40,491,807NCBI
Celera1519,408,011 - 19,472,224 (+)NCBICelera
Cytogenetic Map15q15.1NCBI
HuRef1519,499,872 - 19,552,636 (+)NCBIHuRef
CHM1_11542,770,186 - 42,823,000 (+)NCBICHM1_1
T2T-CHM13v2.01540,165,536 - 40,218,365 (+)NCBIT2T-CHM13v2.0
Capn3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392120,294,074 - 120,335,400 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2120,294,053 - 120,335,399 (+)EnsemblGRCm39 Ensembl
GRCm382120,463,593 - 120,504,919 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2120,456,019 - 120,504,913 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl2120,463,572 - 120,504,918 (+)EnsemblGRCm38mm10GRCm38
MGSCv372120,289,329 - 120,330,655 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362120,155,314 - 120,195,940 (+)NCBIMGSCv36mm8
Celera2121,617,948 - 121,659,023 (+)NCBICelera
Cytogenetic Map2E5NCBI
cM Map260.31NCBI
Capn3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83127,860,002 - 127,913,677 (+)NCBIGRCr8
mRatBN7.23107,407,518 - 107,457,858 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3107,407,850 - 107,457,858 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3111,082,641 - 111,132,438 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03119,678,209 - 119,728,005 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03117,338,596 - 117,388,398 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03112,227,486 - 112,278,408 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3112,228,720 - 112,278,408 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03118,776,357 - 118,825,812 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43106,946,878 - 106,998,274 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13106,843,308 - 106,894,702 (+)NCBI
Celera3106,315,875 - 106,366,640 (+)NCBICelera
Cytogenetic Map3q35NCBI
Capn3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554169,070,399 - 9,117,794 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554169,070,479 - 9,121,099 (+)NCBIChiLan1.0ChiLan1.0
CAPN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1309,329,190 - 9,384,622 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl309,329,015 - 9,383,772 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha309,387,300 - 9,442,600 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0309,464,173 - 9,519,888 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl309,464,000 - 9,519,096 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1309,384,166 - 9,439,578 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0309,489,492 - 9,545,424 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0309,623,343 - 9,678,674 (+)NCBIUU_Cfam_GSD_1.0
Capn3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864087,819,711 - 87,863,585 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364715,668,169 - 5,711,075 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364715,667,839 - 5,711,822 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAPN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1128,960,118 - 129,013,546 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11128,960,117 - 129,013,508 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21143,852,337 - 143,905,767 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap1q15-q17NCBI
CAPN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12640,568,320 - 40,657,443 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2640,568,885 - 40,625,597 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048100,380,987 - 100,442,711 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Capn3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248049,473,117 - 9,512,353 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248049,473,075 - 9,512,643 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003805604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003805605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003805606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008973239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008973249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008973276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034938576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034938577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034938578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034938579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034938580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034938582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034938583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055098317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055098320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055098321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063596582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004666485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004666487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSPPAT00000045450   ⟹   ENSPPAP00000022639
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,476,302 - 39,528,820 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000045458   ⟹   ENSPPAP00000022647
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,476,302 - 39,528,820 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000045474   ⟹   ENSPPAP00000022663
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,476,607 - 39,528,252 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000045484   ⟹   ENSPPAP00000022673
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,476,607 - 39,528,252 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000045493   ⟹   ENSPPAP00000022682
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,496,679 - 39,528,252 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000045503   ⟹   ENSPPAP00000022691
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,526,276 - 39,528,720 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000065258   ⟹   ENSPPAP00000042328
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,386,377 - 39,432,600 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000065259   ⟹   ENSPPAP00000042329
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,386,877 - 39,396,989 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000065266   ⟹   ENSPPAP00000042336
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1539,387,191 - 39,468,956 (+)Ensembl
RefSeq Acc Id: XM_003805604   ⟹   XP_003805652
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,604,069 - 31,661,908 (+)NCBI
NHGRI_mPanPan11535,757,255 - 35,815,136 (+)NCBI
Mhudiblu_PPA_v01521,319,733 - 21,372,405 (+)NCBI
PanPan1.11539,476,074 - 39,528,820 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003805605   ⟹   XP_003805653
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,604,069 - 31,661,908 (+)NCBI
NHGRI_mPanPan11535,757,255 - 35,815,136 (+)NCBI
Mhudiblu_PPA_v01521,319,733 - 21,372,406 (+)NCBI
PanPan1.11539,476,302 - 39,528,820 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003805606   ⟹   XP_003805654
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,604,069 - 31,661,908 (+)NCBI
NHGRI_mPanPan11535,757,255 - 35,815,136 (+)NCBI
Mhudiblu_PPA_v01521,319,733 - 21,372,406 (+)NCBI
PanPan1.11539,476,302 - 39,528,820 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008973239   ⟹   XP_008971487
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,332 - 31,528,001 (+)NCBI
NHGRI_mPanPan11535,671,129 - 35,681,061 (+)NCBI
Mhudiblu_PPA_v01521,227,531 - 21,238,484 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008973276   ⟹   XP_008971524
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,651,699 - 31,661,908 (+)NCBI
NHGRI_mPanPan11535,804,926 - 35,815,136 (+)NCBI
Mhudiblu_PPA_v01521,362,450 - 21,372,406 (+)NCBI
PanPan1.11539,518,865 - 39,528,820 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034938580   ⟹   XP_034794471
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,173 - 31,605,731 (+)NCBI
NHGRI_mPanPan11535,671,129 - 35,758,934 (+)NCBI
Mhudiblu_PPA_v01521,227,531 - 21,314,984 (+)NCBI
RefSeq Acc Id: XM_055098317   ⟹   XP_054954292
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,332 - 31,652,350 (+)NCBI
NHGRI_mPanPan11535,671,191 - 35,805,577 (+)NCBI
RefSeq Acc Id: XM_055098320   ⟹   XP_054954295
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,332 - 31,528,001 (+)NCBI
NHGRI_mPanPan11535,671,129 - 35,681,061 (+)NCBI
RefSeq Acc Id: XM_055098321   ⟹   XP_054954296
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,516,839 - 31,661,908 (+)NCBI
NHGRI_mPanPan11535,671,129 - 35,815,136 (+)NCBI
RefSeq Acc Id: XM_063596571   ⟹   XP_063452641
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,044 - 31,652,350 (+)NCBI
RefSeq Acc Id: XM_063596572   ⟹   XP_063452642
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,516,778 - 31,652,350 (+)NCBI
RefSeq Acc Id: XM_063596573   ⟹   XP_063452643
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,162 - 31,652,350 (+)NCBI
RefSeq Acc Id: XM_063596574   ⟹   XP_063452644
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,044 - 31,605,731 (+)NCBI
RefSeq Acc Id: XM_063596575   ⟹   XP_063452645
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,516,891 - 31,605,731 (+)NCBI
RefSeq Acc Id: XM_063596576   ⟹   XP_063452646
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,516,839 - 31,635,961 (+)NCBI
RefSeq Acc Id: XM_063596578   ⟹   XP_063452648
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,059 - 31,528,001 (+)NCBI
RefSeq Acc Id: XM_063596579   ⟹   XP_063452649
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,516,891 - 31,528,001 (+)NCBI
RefSeq Acc Id: XM_063596580   ⟹   XP_063452650
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,332 - 31,528,001 (+)NCBI
RefSeq Acc Id: XM_063596581   ⟹   XP_063452651
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,516,784 - 31,528,001 (+)NCBI
RefSeq Acc Id: XM_063596582   ⟹   XP_063452652
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,517,059 - 31,528,001 (+)NCBI
RefSeq Acc Id: XR_004666487
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21631,516,839 - 31,595,490 (+)NCBI
NHGRI_mPanPan11535,671,129 - 35,748,689 (+)NCBI
Mhudiblu_PPA_v01521,227,531 - 21,305,981 (+)NCBI
RefSeq Acc Id: XP_003805652   ⟸   XM_003805604
- Peptide Label: isoform X8
- UniProtKB: A0A2R9B0M1 (UniProtKB/TrEMBL),   A0A2R9B0N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003805653   ⟸   XM_003805605
- Peptide Label: isoform X9
- UniProtKB: A0A2R9AZ99 (UniProtKB/TrEMBL),   A0A2R9B0N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003805654   ⟸   XM_003805606
- Peptide Label: isoform X10
- UniProtKB: A0A2R9B3A9 (UniProtKB/TrEMBL),   A0A2R9B0N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008971524   ⟸   XM_008973276
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_034794471   ⟸   XM_034938580
- Peptide Label: isoform X3
RefSeq Acc Id: XP_008971487   ⟸   XM_008973239
- Peptide Label: isoform X6
- UniProtKB: A0A2R9CK44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000022647   ⟸   ENSPPAT00000045458
RefSeq Acc Id: ENSPPAP00000022639   ⟸   ENSPPAT00000045450
RefSeq Acc Id: ENSPPAP00000022663   ⟸   ENSPPAT00000045474
RefSeq Acc Id: ENSPPAP00000022673   ⟸   ENSPPAT00000045484
RefSeq Acc Id: ENSPPAP00000022682   ⟸   ENSPPAT00000045493
RefSeq Acc Id: ENSPPAP00000022691   ⟸   ENSPPAT00000045503
RefSeq Acc Id: ENSPPAP00000042328   ⟸   ENSPPAT00000065258
RefSeq Acc Id: ENSPPAP00000042336   ⟸   ENSPPAT00000065266
RefSeq Acc Id: ENSPPAP00000042329   ⟸   ENSPPAT00000065259
RefSeq Acc Id: XP_054954296   ⟸   XM_055098321
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054954295   ⟸   XM_055098320
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054954292   ⟸   XM_055098317
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063452642   ⟸   XM_063596572
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063452651   ⟸   XM_063596581
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063452646   ⟸   XM_063596576
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063452645   ⟸   XM_063596575
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063452649   ⟸   XM_063596579
- Peptide Label: isoform X6
- UniProtKB: A0A2R9CK44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063452641   ⟸   XM_063596571
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063452644   ⟸   XM_063596574
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063452648   ⟸   XM_063596578
- Peptide Label: isoform X6
- UniProtKB: A0A2R9CK44 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063452652   ⟸   XM_063596582
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063452643   ⟸   XM_063596573
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063452650   ⟸   XM_063596580
- Peptide Label: isoform X7

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034404 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAG00000043738 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000045450.1 UniProtKB/TrEMBL
  ENSPPAT00000045458.1 UniProtKB/TrEMBL
  ENSPPAT00000045474.1 UniProtKB/TrEMBL
  ENSPPAT00000045484.1 UniProtKB/TrEMBL
  ENSPPAT00000045493.1 UniProtKB/TrEMBL
  ENSPPAT00000045503.1 UniProtKB/TrEMBL
  ENSPPAT00000065258.1 UniProtKB/TrEMBL
  ENSPPAT00000065259.1 UniProtKB/TrEMBL
  ENSPPAT00000065266.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.380 UniProtKB/TrEMBL
  2.60.40.1180 UniProtKB/TrEMBL
  Cysteine proteinases UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
  Glycosidases UniProtKB/TrEMBL
  glycosyl hydrolase (family 31) UniProtKB/TrEMBL
InterPro C2_III UniProtKB/TrEMBL
  Calpain_cysteine_protease UniProtKB/TrEMBL
  Calpain_domain_III UniProtKB/TrEMBL
  Calpain_III UniProtKB/TrEMBL
  Calpain_III_sf UniProtKB/TrEMBL
  CAPN3 UniProtKB/TrEMBL
  EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  Gal_mutarotase_sf_dom UniProtKB/TrEMBL
  Glyco_hydro_31 UniProtKB/TrEMBL
  Glyco_hydro_31_AS UniProtKB/TrEMBL
  Glyco_hydro_31_C UniProtKB/TrEMBL
  Glyco_hydro_31_N_dom UniProtKB/TrEMBL
  Glyco_hydro_b UniProtKB/TrEMBL
  Glycoside_hydrolase_SF UniProtKB/TrEMBL
  Papain-like_cys_pep_sf UniProtKB/TrEMBL
  Pept_cys_AS UniProtKB/TrEMBL
  Peptidase_C2_calpain_cat UniProtKB/TrEMBL
KEGG Report pps:100984344 UniProtKB/TrEMBL
NCBI Gene CAPN3 ENTREZGENE
PANTHER ALPHA-GLUCOSIDASE UniProtKB/TrEMBL
  CALPAIN UniProtKB/TrEMBL
  CALPAIN, SMALL SUBUNIT 1 A-RELATED UniProtKB/TrEMBL
  CALPAIN, SMALL SUBUNIT 1 A-RELATED UniProtKB/TrEMBL
  NEUTRAL ALPHA-GLUCOSIDASE C UniProtKB/TrEMBL
  PTHR10183:SF329 UniProtKB/TrEMBL
Pfam Calpain_III UniProtKB/TrEMBL
  Calpain_u2 UniProtKB/TrEMBL
  EF-hand_1 UniProtKB/TrEMBL
  EF-hand_5 UniProtKB/TrEMBL
  EF-hand_6 UniProtKB/TrEMBL
  EF-hand_8 UniProtKB/TrEMBL
  Gal_mutarotas_2 UniProtKB/TrEMBL
  Glyco_hydro_31 UniProtKB/TrEMBL
  Glyco_hydro_31_3rd UniProtKB/TrEMBL
  Peptidase_C2 UniProtKB/TrEMBL
PRINTS CALPAIN UniProtKB/TrEMBL
PROSITE CALPAIN_CAT UniProtKB/TrEMBL
  EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  GLYCOSYL_HYDROL_F31_1 UniProtKB/TrEMBL
  THIOL_PROTEASE_CYS UniProtKB/TrEMBL
SMART calpain_III UniProtKB/TrEMBL
  CysPc UniProtKB/TrEMBL
  EFh UniProtKB/TrEMBL
Superfamily-SCOP Glycosyl hydrolase domain UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
  SSF49758 UniProtKB/TrEMBL
  SSF51445 UniProtKB/TrEMBL
  SSF54001 UniProtKB/TrEMBL
  SSF74650 UniProtKB/TrEMBL
UniProt A0A2R9AZ99 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B0M1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B0N1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B3A9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9B3F6_PANPA UniProtKB/TrEMBL
  A0A2R9B5Q8_PANPA UniProtKB/TrEMBL
  A0A2R9CK44 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CK52_PANPA UniProtKB/TrEMBL
  A0A2R9CMQ6_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-01 LOC100984344  calpain-3  CAPN3  calpain 3  Symbol and/or name change 5135510 APPROVED
2020-06-11 CAPN3  calpain 3  GANC  glucosidase alpha, neutral C  Data merged from RGD:12002860 737654 PROVISIONAL