CENPQ (centromere protein Q) - Rat Genome Database

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Gene: CENPQ (centromere protein Q) Pan paniscus
Analyze
Symbol: CENPQ
Name: centromere protein Q
RGD ID: 11772384
Description: INVOLVED IN metaphase chromosome alignment (inferred); positive regulation of protein localization to kinetochore (inferred); FOUND IN inner kinetochore (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2563,954,653 - 63,983,111 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1659,819,374 - 59,848,018 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0649,040,467 - 49,069,115 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1650,302,606 - 50,331,096 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl650,302,606 - 50,331,096 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CENPQ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2563,954,653 - 63,983,111 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1659,819,374 - 59,848,018 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0649,040,467 - 49,069,115 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1650,302,606 - 50,331,096 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl650,302,606 - 50,331,096 (+)Ensemblpanpan1.1panPan2
CENPQ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38649,463,370 - 49,493,107 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl649,463,370 - 49,493,107 (+)EnsemblGRCh38hg38GRCh38
GRCh37649,431,083 - 49,460,820 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36649,539,055 - 49,568,779 (+)NCBINCBI36Build 36hg18NCBI36
Build 34649,539,054 - 49,568,779NCBI
Celera650,987,302 - 51,017,018 (+)NCBICelera
Cytogenetic Map6p12.3NCBI
HuRef649,160,017 - 49,190,307 (+)NCBIHuRef
CHM1_1649,434,135 - 49,463,848 (+)NCBICHM1_1
T2T-CHM13v2.0649,305,401 - 49,335,269 (+)NCBIT2T-CHM13v2.0
Cenpq
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391741,231,700 - 41,247,637 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1741,233,942 - 41,245,938 (-)EnsemblGRCm39 Ensembl
GRCm381740,920,809 - 40,934,574 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1740,923,051 - 40,935,047 (-)EnsemblGRCm38mm10GRCm38
MGSCv371741,060,004 - 41,071,500 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361740,386,539 - 40,398,035 (-)NCBIMGSCv36mm8
Celera1744,336,299 - 44,347,769 (-)NCBICelera
Cytogenetic Map17B2NCBI
cM Map1719.55NCBI
Cenpq
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8927,454,339 - 27,469,371 (+)NCBIGRCr8
mRatBN7.2919,957,122 - 19,972,807 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl919,957,048 - 19,972,789 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx928,528,381 - 28,544,024 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0933,602,934 - 33,618,577 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0931,911,702 - 31,926,888 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0923,352,271 - 23,368,774 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0922,211,293 - 22,226,466 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4915,758,645 - 15,768,747 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1916,091,441 - 16,106,217 (+)NCBI
Celera917,634,682 - 17,649,991 (+)NCBICelera
Cytogenetic Map9q13NCBI
Cenpq
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541033,464,976 - 33,476,609 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541033,463,041 - 33,480,573 (-)NCBIChiLan1.0ChiLan1.0
CENPQ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11217,339,914 - 17,355,921 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1217,340,001 - 17,355,937 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1217,239,470 - 17,256,300 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01217,835,667 - 17,852,592 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1217,836,197 - 17,852,592 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11217,355,499 - 17,372,346 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01217,460,762 - 17,477,607 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01217,590,343 - 17,607,227 (+)NCBIUU_Cfam_GSD_1.0
Cenpq
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494652,752,034 - 52,770,888 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647611,190,535 - 11,201,011 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647611,189,336 - 11,208,154 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CENPQ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl743,624,832 - 43,641,028 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1743,624,734 - 43,639,907 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2750,146,201 - 50,161,345 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CENPQ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11722,898,962 - 22,922,234 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1722,900,089 - 22,915,378 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604449,455,607 - 49,478,619 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cenpq
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247831,826,368 - 1,836,263 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247831,825,234 - 1,838,794 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000054258   ⟹   ENSPPAP00000031394
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl650,302,606 - 50,331,096 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000054265   ⟹   ENSPPAP00000031401
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl650,302,608 - 50,330,269 (+)Ensembl
RefSeq Acc Id: XM_003833183   ⟹   XP_003833231
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2563,954,653 - 63,983,111 (+)NCBI
NHGRI_mPanPan1659,819,374 - 59,848,018 (+)NCBI
Mhudiblu_PPA_v0649,040,480 - 49,068,553 (+)NCBI
PanPan1.1650,302,630 - 50,331,096 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008958673   ⟹   XP_008956921
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2563,954,653 - 63,983,111 (+)NCBI
NHGRI_mPanPan1659,819,374 - 59,848,017 (+)NCBI
Mhudiblu_PPA_v0649,040,467 - 49,069,115 (+)NCBI
PanPan1.1650,302,606 - 50,331,096 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003833231 (Get FASTA)   NCBI Sequence Viewer  
  XP_008956921 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000031394
  ENSPPAP00000031394.1
  ENSPPAP00000031401.1
RefSeq Acc Id: XP_008956921   ⟸   XM_008958673
- UniProtKB: A0A2R9BPQ7 (UniProtKB/TrEMBL),   A0A2R9BNZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003833231   ⟸   XM_003833183
- UniProtKB: A0A2R9BPQ7 (UniProtKB/TrEMBL),   A0A2R9BNZ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000031394   ⟸   ENSPPAT00000054258
RefSeq Acc Id: ENSPPAP00000031401   ⟸   ENSPPAT00000054265


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038636 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000054258.1 UniProtKB/TrEMBL
  ENSPPAT00000054265.1 UniProtKB/TrEMBL
InterPro CAD_CENP-Q UniProtKB/TrEMBL
KEGG Report pps:100989241 UniProtKB/TrEMBL
NCBI Gene CENPQ ENTREZGENE
PANTHER CENTROMERE PROTEIN Q UniProtKB/TrEMBL
  PTHR31345 UniProtKB/TrEMBL
Pfam CENP-Q UniProtKB/TrEMBL
UniProt A0A2R9BNZ5 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9BPQ7 ENTREZGENE, UniProtKB/TrEMBL