VCPKMT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 51,245,296 - 51,257,054 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 50,461,800 - 50,473,274 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 30,695,992 - 30,707,327 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 49,002,181 - 49,013,187 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 49,002,181 - 49,013,187 (-) | Ensembl | panpan1.1 | | panPan2 | |
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VCPKMT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 50,102,716 - 50,116,572 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 50,108,632 - 50,116,600 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 50,575,355 - 50,583,290 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 49,645,100 - 49,653,047 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 49,645,105 - 49,653,047 | NCBI | | | | | Celera | 14 | 30,442,491 - 30,450,433 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q21.3 | NCBI | | | | | HuRef | 14 | 30,700,814 - 30,708,767 (-) | NCBI | | HuRef | | | CHM1_1 | 14 | 50,514,037 - 50,522,000 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 44,309,674 - 44,322,811 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Vcpkmt (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 12 | 69,623,504 - 69,629,883 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 69,624,402 - 69,629,884 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 69,576,735 - 69,583,017 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 69,577,628 - 69,583,110 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 70,678,615 - 70,684,015 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 70,498,281 - 70,501,620 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 70,666,463 - 70,671,887 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | C2 | NCBI | | | | | cM Map | 12 | 28.92 | NCBI | | | | |
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Vcpkmt (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 93,772,558 - 93,778,400 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 88,036,485 - 88,042,151 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 88,036,494 - 88,042,000 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 6 | 91,880,342 - 91,884,336 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 101,330,561 - 101,336,079 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 91,602,980 - 91,610,509 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 6 | 86,533,202 - 86,537,196 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q24 | NCBI | | | | |
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Vcpkmt (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955409 | 12,622,259 - 12,632,246 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955409 | 12,622,259 - 12,632,246 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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VCPKMT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 26,611,333 - 26,636,700 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 26,625,677 - 26,636,316 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 26,364,923 - 26,390,315 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 26,789,131 - 26,814,525 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 26,807,761 - 26,814,116 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 26,444,053 - 26,469,453 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 26,516,540 - 26,541,946 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 26,835,201 - 26,860,599 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Vcpkmt (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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VCPKMT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 179,899,646 - 179,906,967 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 179,899,642 - 179,907,439 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 200,260,935 - 200,262,345 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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VCPKMT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 24 | 27,173,859 - 27,182,941 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 27,173,840 - 27,182,924 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 15,504,133 - 15,512,575 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Vcpkmt (Heterocephalus glaber - naked mole-rat) |
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