AP1G2 (adaptor related protein complex 1 subunit gamma 2) - Rat Genome Database

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Gene: AP1G2 (adaptor related protein complex 1 subunit gamma 2) Pan paniscus
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Symbol: AP1G2
Name: adaptor related protein complex 1 subunit gamma 2
RGD ID: 11711514
Description: ENCODES a protein that exhibits clathrin adaptor activity (inferred); INVOLVED IN Golgi to vacuole transport (inferred); intracellular protein transport (inferred); protein transport (inferred); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); Developmental Disabilities (ortholog); lysinuric protein intolerance (ortholog); FOUND IN synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: adaptor related protein complex 1 gamma 2 subunit; AP-1 complex subunit gamma-like 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21524,990,582 - 24,998,331 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11424,207,074 - 24,215,379 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0144,378,017 - 4,386,319 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11422,471,343 - 22,479,606 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1422,471,343 - 22,479,801 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
AP1G2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21524,990,582 - 24,998,331 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11424,207,074 - 24,215,379 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0144,378,017 - 4,386,319 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11422,471,343 - 22,479,606 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1422,471,343 - 22,479,801 (-)Ensemblpanpan1.1panPan2
AP1G2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381423,559,567 - 23,567,791 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1423,559,565 - 23,568,070 (-)EnsemblGRCh38hg38GRCh38
GRCh371424,028,776 - 24,037,000 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361423,098,616 - 23,107,119 (-)NCBINCBI36Build 36hg18NCBI36
Build 341423,098,616 - 23,107,119NCBI
Celera143,891,447 - 3,899,947 (-)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef144,145,296 - 4,153,793 (-)NCBIHuRef
CHM1_11424,027,437 - 24,035,928 (-)NCBICHM1_1
T2T-CHM13v2.01417,760,126 - 17,768,361 (-)NCBIT2T-CHM13v2.0
Ap1g2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391455,336,292 - 55,344,050 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1455,336,032 - 55,344,050 (-)EnsemblGRCm39 Ensembl
GRCm381455,098,835 - 55,106,593 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1455,098,575 - 55,106,593 (-)EnsemblGRCm38mm10GRCm38
MGSCv371455,717,687 - 55,725,430 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361454,052,926 - 54,060,218 (-)NCBIMGSCv36mm8
Celera1452,904,747 - 52,912,490 (-)NCBICelera
Cytogenetic Map14C3NCBI
cM Map1428.07NCBI
Ap1g2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81532,541,528 - 32,549,392 (-)NCBIGRCr8
mRatBN7.21528,571,571 - 28,579,421 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1528,571,568 - 28,589,004 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01533,759,108 - 33,767,017 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,759,001 - 33,766,438 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01537,646,196 - 37,654,142 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41533,205,056 - 33,212,801 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1528,149,554 - 28,157,463 (-)NCBICelera
Cytogenetic Map15p13NCBI
Ap1g2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540936,795,358 - 36,803,605 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540936,795,351 - 36,803,605 (+)NCBIChiLan1.0ChiLan1.0
AP1G2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.183,785,085 - 3,793,081 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl83,629,585 - 3,792,725 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha83,706,961 - 3,714,960 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.083,895,368 - 3,903,367 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl83,895,370 - 3,903,092 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.183,586,577 - 3,594,576 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.083,648,029 - 3,656,028 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.083,910,114 - 3,918,113 (-)NCBIUU_Cfam_GSD_1.0
Ap1g2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864035,529,746 - 35,538,060 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936722851,917 - 859,052 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936722851,182 - 859,238 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP1G2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl775,533,202 - 75,549,488 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1775,533,131 - 75,549,490 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2780,848,680 - 80,863,738 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AP1G2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12923,930,703 - 23,939,239 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2923,929,216 - 23,938,553 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605922,479,554 - 22,487,920 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ap1g2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248209,011,345 - 9,019,487 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248209,011,251 - 9,019,487 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000036391   ⟹   ENSPPAP00000013717
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1422,471,343 - 22,479,801 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000036397   ⟹   ENSPPAP00000013723
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1422,471,525 - 22,479,086 (-)Ensembl
RefSeq Acc Id: XM_003808082   ⟹   XP_003808130
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21524,990,582 - 24,998,331 (-)NCBI
NHGRI_mPanPan11424,207,074 - 24,215,379 (-)NCBI
Mhudiblu_PPA_v0144,378,017 - 4,386,319 (-)NCBI
PanPan1.11422,471,343 - 22,479,600 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008960157   ⟹   XP_008958405
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21524,990,582 - 24,998,331 (-)NCBI
NHGRI_mPanPan11424,207,074 - 24,215,379 (-)NCBI
Mhudiblu_PPA_v0144,378,017 - 4,386,319 (-)NCBI
PanPan1.11422,471,343 - 22,479,583 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034937307   ⟹   XP_034793198
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21524,990,582 - 24,998,331 (-)NCBI
NHGRI_mPanPan11424,207,074 - 24,214,823 (-)NCBI
Mhudiblu_PPA_v0144,378,017 - 4,385,793 (-)NCBI
RefSeq Acc Id: XM_034937310   ⟹   XP_034793201
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21524,990,582 - 24,997,336 (-)NCBI
NHGRI_mPanPan11424,207,074 - 24,213,828 (-)NCBI
Mhudiblu_PPA_v0144,378,017 - 4,384,776 (-)NCBI
RefSeq Acc Id: XM_055097355   ⟹   XP_054953330
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21524,990,582 - 24,998,331 (-)NCBI
NHGRI_mPanPan11424,207,074 - 24,215,379 (-)NCBI
RefSeq Acc Id: XM_055097356   ⟹   XP_054953331
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21524,991,276 - 24,998,331 (-)NCBI
NHGRI_mPanPan11424,207,767 - 24,214,823 (-)NCBI
RefSeq Acc Id: XP_008958405   ⟸   XM_008960157
- Peptide Label: isoform X1
- UniProtKB: A0A2R9ADY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003808130   ⟸   XM_003808082
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AE73 (UniProtKB/TrEMBL),   A0A2R9ADY1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034793198   ⟸   XM_034937307
- Peptide Label: isoform X2
- UniProtKB: A0A2R9ADY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034793201   ⟸   XM_034937310
- Peptide Label: isoform X6
RefSeq Acc Id: ENSPPAP00000013723   ⟸   ENSPPAT00000036397
RefSeq Acc Id: ENSPPAP00000013717   ⟸   ENSPPAT00000036391
RefSeq Acc Id: XP_054953330   ⟸   XM_055097355
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054953331   ⟸   XM_055097356
- Peptide Label: isoform X5
Protein Domains
GAE


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030009 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036391.1 UniProtKB/TrEMBL
  ENSPPAT00000036397.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
  2.60.40.1230 UniProtKB/TrEMBL
InterPro AP1_complex_gsu UniProtKB/TrEMBL
  ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Clathrin/coatomer_adapt-like_N UniProtKB/TrEMBL
  Clathrin_a/b/g-adaptin_app_Ig UniProtKB/TrEMBL
  Clathrin_app_Ig-like_sf UniProtKB/TrEMBL
  GAE_dom UniProtKB/TrEMBL
KEGG Report pps:100976723 UniProtKB/TrEMBL
NCBI Gene AP1G2 ENTREZGENE
PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON UniProtKB/TrEMBL
  AP-1 COMPLEX SUBUNIT GAMMA-LIKE 2 UniProtKB/TrEMBL
Pfam Adaptin_N UniProtKB/TrEMBL
  Alpha_adaptinC2 UniProtKB/TrEMBL
PIRSF AP1_complex_gamma UniProtKB/TrEMBL
PROSITE GAE UniProtKB/TrEMBL
SMART Alpha_adaptinC2 UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
  SSF49348 UniProtKB/TrEMBL
UniProt A0A2R9ADY1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AE73 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 AP1G2  adaptor related protein complex 1 subunit gamma 2    adaptor related protein complex 1 gamma 2 subunit  Symbol and/or name change 5135510 APPROVED