SLC25A2 (solute carrier family 25 member 2) - Rat Genome Database

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Pathways
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Gene: SLC25A2 (solute carrier family 25 member 2) Pan paniscus
Analyze
Symbol: SLC25A2
Name: solute carrier family 25 member 2
RGD ID: 11691352
Description: ENCODES a protein that exhibits L-arginine transmembrane transporter activity (ortholog); L-lysine transmembrane transporter activity (ortholog); L-ornithine transmembrane transporter activity (ortholog); INVOLVED IN L-arginine transmembrane transport (ortholog); L-lysine transmembrane transport (ortholog); L-ornithine transmembrane transport (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial ornithine transporter 2
RGD Orthologs
Human
Mouse
Rat
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24136,552,172 - 136,557,044 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15134,691,724 - 134,695,284 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05136,664,485 - 136,666,344 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15142,778,348 - 142,779,770 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
SLC25A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24136,552,172 - 136,557,044 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15134,691,724 - 134,695,284 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05136,664,485 - 136,666,344 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15142,778,348 - 142,779,770 (-)NCBIpanpan1.1PanPan1.1panPan2
SLC25A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385141,302,635 - 141,304,049 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5141,302,635 - 141,304,049 (-)EnsemblGRCh38hg38GRCh38
GRCh375140,682,202 - 140,683,616 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,662,380 - 140,663,796 (-)NCBINCBI36Build 36hg18NCBI36
Build 345140,662,379 - 140,663,616NCBI
Celera5136,759,021 - 136,760,437 (-)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5135,827,253 - 135,828,669 (-)NCBIHuRef
CHM1_15140,115,401 - 140,116,817 (-)NCBICHM1_1
T2T-CHM13v2.05141,827,934 - 141,829,348 (-)NCBIT2T-CHM13v2.0
Slc25a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391837,770,431 - 37,771,776 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1837,770,431 - 37,771,776 (-)EnsemblGRCm39 Ensembl
GRCm381837,637,378 - 37,638,723 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1837,637,378 - 37,638,723 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1837,637,377 - 37,638,745 (-)EnsemblGRCm38mm10GRCm38
MGSCv371837,797,032 - 37,798,377 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361837,763,352 - 37,764,697 (-)NCBIMGSCv36mm8
Celera1838,969,866 - 38,971,211 (-)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1819.54NCBI
Slc25a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81829,704,182 - 29,707,563 (-)NCBIGRCr8
mRatBN7.21829,452,943 - 29,456,324 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1829,453,582 - 29,460,383 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1829,557,293 - 29,560,674 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01830,319,302 - 30,322,683 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01829,654,627 - 29,658,008 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01830,774,205 - 30,775,401 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1830,774,205 - 30,775,401 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01830,470,432 - 30,471,628 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41830,536,488 - 30,537,684 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11830,563,379 - 30,564,385 (-)NCBI
Celera1829,102,009 - 29,103,205 (-)NCBICelera
Cytogenetic Map18p11NCBI
SLC25A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1236,286,080 - 36,287,619 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl236,286,584 - 36,287,489 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha233,337,980 - 33,339,519 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0236,740,699 - 36,742,238 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl236,741,203 - 36,742,108 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1233,814,742 - 33,816,281 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0234,625,750 - 34,627,289 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0235,433,398 - 35,434,937 (-)NCBIUU_Cfam_GSD_1.0
SLC25A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2142,944,078 - 142,944,980 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12142,943,565 - 142,947,313 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22149,142,741 - 149,144,549 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12343,922,525 - 43,924,166 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2343,922,816 - 43,923,721 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603433,930,087 - 33,931,925 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624774541,115 - 542,020 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624774540,820 - 542,200 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_063604352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_063604352   ⟹   XP_063460422
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24136,552,172 - 136,557,044 (-)NCBI
Protein Sequences
Protein RefSeqs XP_063460422 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_063460422   ⟸   XM_063604352


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000002143 ENTREZGENE
NCBI Gene SLC25A2 ENTREZGENE