LOC108352511 (uncharacterized LOC108352511) - Rat Genome Database

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Gene: LOC108352511 (uncharacterized LOC108352511) Rattus norvegicus
Analyze
Symbol: LOC108352511
Name: uncharacterized LOC108352511
RGD ID: 11462184
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8139,169,092 - 9,372,244 (-)NCBIGRCr8
mRatBN7.2139,171,955 - 9,365,032 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01312,638,873 - 12,661,679 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera1310,253,168 - 10,276,533 (-)NCBICelera
Cytogenetic Map13p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC108352511
1718 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317027Aia22Adjuvant induced arthritis QTL 222.29joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)13134266636Rat
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13142356786Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
631672Iddm12Insulin dependent diabetes mellitus QTL 122.20.0032blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)13599466834535351Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13599466844807491Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)13931346554313465Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)13931346554313465Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_001840791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001845753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005492303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005492306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XR_005492303
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
mRatBN7.2139,269,828 - 9,365,032 (-)NCBI
RefSeq Acc Id: XR_005492306
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,169,092 - 9,372,244 (-)NCBI
mRatBN7.2139,171,955 - 9,365,032 (-)NCBI
RefSeq Acc Id: XR_010056945
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056947
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056948
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056949
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056950
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056951
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,169,092 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056952
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056953
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056954
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,274,432 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056955
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,169,092 - 9,372,244 (-)NCBI
RefSeq Acc Id: XR_010056956
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8139,342,785 - 9,372,244 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-18695 BioCyc
NCBI Gene LOC108352511 ENTREZGENE
PhenoGen LOC108352511 PhenoGen
RNAcentral URS0000CCE69C RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108352511  uncharacterized LOC108352511      Symbol and Name status set to provisional 70820 PROVISIONAL