LOC108351811 (40S ribosomal protein S27-like) - Rat Genome Database

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Gene: LOC108351811 (40S ribosomal protein S27-like) Rattus norvegicus
Analyze
Symbol: LOC108351811
Name: 40S ribosomal protein S27-like
RGD ID: 11443688
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: small ribosomal subunit protein eS27-like
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88128,261,576 - 128,264,251 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.28119,383,883 - 119,386,116 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.08128,338,618 - 128,341,455 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Cytogenetic Map8q32NCBI
JBrowse:




References

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
35 2 11 27 77 75 71 54 3 54 20 143 66 5 76 44 50 17 9 9

Sequence


RefSeq Acc Id: XM_039082790   ⟹   XP_038938718
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,261,576 - 128,264,251 (+)NCBI
mRatBN7.28119,383,883 - 119,386,116 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038938718 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038938718   ⟸   XM_039082790


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-28783 BioCyc
NCBI Gene LOC108351811 ENTREZGENE
PhenoGen LOC108351811 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108351811  40S ribosomal protein S27-like      Symbol and Name status set to provisional 70820 PROVISIONAL