LOC691950 (Ig heavy chain V region VH558 A1/A4-like) - Rat Genome Database

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Gene: LOC691950 (Ig heavy chain V region VH558 A1/A4-like) Rattus norvegicus
Analyze
Symbol: LOC691950
Name: Ig heavy chain V region VH558 A1/A4-like
RGD ID: 11052004
Description:
Type: gene
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86142,659,117 - 142,659,639 (-)NCBIGRCr8
mRatBN7.26136,516,083 - 136,516,605 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.06143,577,039 - 143,577,518 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06152,519,601 - 152,520,074 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera6134,187,336 - 134,187,809 (-)NCBICelera
Cytogenetic Map6q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC691950
39 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)6122549046137801795Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
2312560Pur20Proteinuria QTL 202.10.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008765008   ⟹   XP_008763230
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.06143,577,039 - 143,577,518 (-)NCBI
RefSeq Acc Id: XM_008776354   ⟹   XP_008774576
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera6134,158,588 - 134,187,815 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35551 BioCyc
NCBI Gene LOC691950 ENTREZGENE
PhenoGen LOC691950 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-12 LOC691950  Ig heavy chain V region VH558 A1/A4-like      Symbol and Name status set to provisional 70820 PROVISIONAL