SEPTIN14P2 (septin 14 pseudogene 2) - Rat Genome Database

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Gene: SEPTIN14P2 (septin 14 pseudogene 2) Homo sapiens
Analyze
Symbol: SEPTIN14P2
Name: septin 14 pseudogene 2
RGD ID: 10450695
HGNC Page HGNC:51686
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: SEPT14P2
Related Functional Gene: SEPTIN14  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382242,122,285 - 242,124,852 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2242,122,287 - 242,122,469 (+)EnsemblGRCh38hg38GRCh38
GRCh372243,064,436 - 243,067,003 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2q37.3NCBI
CHM1_12243,070,481 - 243,073,046 (+)NCBICHM1_1
T2T-CHM13v2.02242,631,950 - 242,634,517 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:110
Count of miRNA genes:109
Interacting mature miRNAs:110
Transcripts:ENST00000453405
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage entire extraembryonic component
High
Medium
Low 22 15 11 62 12 51 6 10 10 58 39 1
Below cutoff 35 5 29 19 101 20 28 36 33 37 46 69 3

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000453405
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2242,122,287 - 242,122,469 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC SEPTIN14P2 COSMIC
Ensembl Genes ENSG00000244528 Ensembl
GTEx ENSG00000244528 GTEx
HGNC ID HGNC:51686 ENTREZGENE
Human Proteome Map SEPTIN14P2 Human Proteome Map
NCBI Gene SEPT14P2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-09 SEPTIN14P2  septin 14 pseudogene 2  SEPT14P2    Symbol and/or name change 5135510 APPROVED