RN7SL851P (RNA, 7SL, cytoplasmic 851, pseudogene) - Rat Genome Database

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Gene: RN7SL851P (RNA, 7SL, cytoplasmic 851, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL851P
Name: RNA, 7SL, cytoplasmic 851, pseudogene
RGD ID: 10413357
HGNC Page HGNC:46867
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3876,047,721 - 6,048,023 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl76,047,721 - 6,048,023 (-)EnsemblGRCh38hg38GRCh38
GRCh3776,087,352 - 6,087,654 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map7p22.1NCBI
CHM1_176,087,058 - 6,087,360 (-)NCBICHM1_1
T2T-CHM13v2.076,165,496 - 6,165,798 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:210
Count of miRNA genes:192
Interacting mature miRNAs:196
Transcripts:ENST00000480512
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 3 1
Low 178 160 180 68 360 47 595 67 177 54 228 294 25 120 268 4
Below cutoff 815 799 606 213 444 131 1425 444 782 105 497 625 84 488 797

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000480512
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl76,047,721 - 6,048,023 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL851P COSMIC
Ensembl Genes ENSG00000240718 Ensembl, ENTREZGENE
GTEx ENSG00000240718 GTEx
HGNC ID HGNC:46867 ENTREZGENE
Human Proteome Map RN7SL851P Human Proteome Map
NCBI Gene RN7SL851P ENTREZGENE