Gene: RNU6-185P (RNA, U6 small nuclear 185, pseudogene) Homo sapiens |
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Analyze |
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Symbol: |
RNU6-185P |
Name: |
RNA, U6 small nuclear 185, pseudogene |
RGD ID: |
10400566 |
HGNC Page |
HGNC:47148 |
Description: |
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Type: |
pseudo (Ensembl: snRNA)
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RefSeq Status: |
INFERRED |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Related Functional Gene: |
RNU6-1
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Latest Assembly: |
GRCh38 - Human Genome Assembly GRCh38 |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 87,474,183 - 87,474,289 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 87,474,183 - 87,474,289 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 88,017,414 - 88,017,520 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 15 | q25.3 | NCBI | | | | | CHM1_1 | 15 | 87,858,434 - 87,858,540 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 85,228,773 - 85,228,879 (-) | NCBI | | T2T-CHM13v2.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
RNU6-185P (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 87,474,183 - 87,474,289 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 87,474,183 - 87,474,289 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 88,017,414 - 88,017,520 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 15 | q25.3 | NCBI | | | | | CHM1_1 | 15 | 87,858,434 - 87,858,540 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 85,228,773 - 85,228,879 (-) | NCBI | | T2T-CHM13v2.0 | | |
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LOC119873540 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Dog10K_Boxer_Tasha | 9 | 49,623,743 - 49,623,849 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 51,217,121 - 51,217,227 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 51,217,121 - 51,217,227 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 49,978,190 - 49,978,296 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 50,320,775 - 50,320,881 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 50,398,858 - 50,398,964 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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miRNA Target Status
Predicted Target Of
Count of predictions: | 89 | Count of miRNA genes: | 89 | Interacting mature miRNAs: | 89 | Transcripts: | ENST00000384421 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction | |
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
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alimentary part of gastrointestinal system |
circulatory system |
endocrine system |
exocrine system |
hemolymphoid system |
hepatobiliary system |
integumental system |
musculoskeletal system |
nervous system |
renal system |
reproductive system |
respiratory system |
sensory system |
appendage |
entire extraembryonic component |
High |
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Medium |
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Low |
4
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1
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11
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7
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1
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1
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1
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2
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7
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1
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1
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Below cutoff |
1
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1
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1
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1
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5
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2
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3
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3
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2
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1
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4
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3
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1
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1
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1
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Sequence
RefSeq Acc Id: |
ENST00000384421 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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GRCh38.p14 Ensembl | 15 | 87,474,183 - 87,474,289 (-) | Ensembl |
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Additional Information
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