Gene: RNU6-464P (RNA, U6 small nuclear 464, pseudogene) Homo sapiens |
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Analyze |
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Symbol: |
RNU6-464P |
Name: |
RNA, U6 small nuclear 464, pseudogene |
RGD ID: |
10400215 |
HGNC Page |
HGNC:47427 |
Description: |
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Type: |
pseudo (Ensembl: snRNA)
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RefSeq Status: |
INFERRED |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Related Functional Gene: |
RNU6-1
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Latest Assembly: |
GRCh38 - Human Genome Assembly GRCh38 |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 53,153,795 - 53,153,898 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 53,153,795 - 53,153,898 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 53,018,593 - 53,018,696 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 6 | p12.1 | NCBI | | | | | CHM1_1 | 6 | 53,020,371 - 53,020,474 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 52,993,404 - 52,993,507 (-) | NCBI | | T2T-CHM13v2.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
RNU6-464P (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 53,153,795 - 53,153,898 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 53,153,795 - 53,153,898 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 53,018,593 - 53,018,696 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 6 | p12.1 | NCBI | | | | | CHM1_1 | 6 | 53,020,371 - 53,020,474 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 52,993,404 - 52,993,507 (-) | NCBI | | T2T-CHM13v2.0 | | |
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LOC120093315 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 46,630,182 - 46,630,283 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 40,901,534 - 40,901,635 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 40,901,534 - 40,901,635 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 Ensembl | 6 | 43,429,114 - 43,429,219 (+) | NCBI | Rnor6.0 | | rn6 | Rnor6.0 | Cytogenetic Map | 6 | q16 | NCBI | | | | |
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miRNA Target Status
Predicted Target Of
Count of predictions: | 88 | Count of miRNA genes: | 86 | Interacting mature miRNAs: | 87 | Transcripts: | ENST00000517217 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction | |
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
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alimentary part of gastrointestinal system |
circulatory system |
endocrine system |
exocrine system |
hemolymphoid system |
hepatobiliary system |
integumental system |
musculoskeletal system |
nervous system |
renal system |
reproductive system |
respiratory system |
sensory system |
adipose tissue |
appendage |
entire extraembryonic component |
High |
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Medium |
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Low |
2
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2
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4
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2
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26
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2
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6
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1
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6
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1
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5
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7
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2
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3
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Below cutoff |
2
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7
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1
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1
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14
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1
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7
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7
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9
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2
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13
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6
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1
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2
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5
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2
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Sequence
RefSeq Acc Id: |
ENST00000517217 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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GRCh38.p14 Ensembl | 6 | 53,153,795 - 53,153,898 (-) | Ensembl |
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Additional Information
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