RN7SL718P (RNA, 7SL, cytoplasmic 718, pseudogene) - Rat Genome Database

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Gene: RN7SL718P (RNA, 7SL, cytoplasmic 718, pseudogene) Homo sapiens
Analyze
Symbol: RN7SL718P
Name: RNA, 7SL, cytoplasmic 718, pseudogene
RGD ID: 10399790
HGNC Page HGNC:46734
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Related Functional Gene: RN7SL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381941,190,927 - 41,191,229 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1941,190,927 - 41,191,229 (-)EnsemblGRCh38hg38GRCh38
GRCh371941,696,832 - 41,697,134 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map19q13.2NCBI
T2T-CHM13v2.01944,011,835 - 44,012,137 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:259
Count of miRNA genes:250
Interacting mature miRNAs:256
Transcripts:ENST00000581254
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1
Low 21 3 30 8 77 8 64 13 33 54 33 101 2 1 1
Below cutoff 140 95 113 49 142 44 250 88 234 73 151 203 13 50 99 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000581254
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1941,190,927 - 41,191,229 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SL718P COSMIC
Ensembl Genes ENSG00000264423 Ensembl, ENTREZGENE
GTEx ENSG00000264423 GTEx
HGNC ID HGNC:46734 ENTREZGENE
Human Proteome Map RN7SL718P Human Proteome Map
NCBI Gene RN7SL718P ENTREZGENE