DYNLL1P5 (dynein light chain LC8-type 1 pseudogene 5) - Rat Genome Database

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Gene: DYNLL1P5 (dynein light chain LC8-type 1 pseudogene 5) Homo sapiens
Analyze
Symbol: DYNLL1P5
Name: dynein light chain LC8-type 1 pseudogene 5
RGD ID: 10399367
HGNC Page HGNC:49656
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: DYNLL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383154,657,256 - 154,657,763 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3154,657,294 - 154,657,563 (+)EnsemblGRCh38hg38GRCh38
GRCh373154,375,045 - 154,375,552 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map3q25.2NCBI
CHM1_13154,338,088 - 154,338,357 (+)NCBICHM1_1
T2T-CHM13v2.03157,431,213 - 157,431,720 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:120
Count of miRNA genes:119
Interacting mature miRNAs:120
Transcripts:ENST00000467158
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 3 1
Below cutoff 7 3 3 2 7 1 13 9 8 4 19 3 1 2 11

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000467158
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3154,657,294 - 154,657,563 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC DYNLL1P5 COSMIC
Ensembl Genes ENSG00000242151 Ensembl
GTEx ENSG00000242151 GTEx
HGNC ID HGNC:49656 ENTREZGENE
Human Proteome Map DYNLL1P5 Human Proteome Map
NCBI Gene DYNLL1P5 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-07 DYNLL1P5  dynein light chain LC8-type 1 pseudogene 5    dynein, light chain, LC8-type 1 pseudogene 5  Symbol and/or name change 5135510 APPROVED