Gene: RNU4-44P (RNA, U4 small nuclear 44, pseudogene) Homo sapiens |
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Analyze |
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Symbol: |
RNU4-44P |
Name: |
RNA, U4 small nuclear 44, pseudogene |
RGD ID: |
10399119 |
HGNC Page |
HGNC:46980 |
Description: |
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Type: |
pseudo (Ensembl: snRNA)
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RefSeq Status: |
INFERRED |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Related Functional Gene: |
RNU4-1
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Latest Assembly: |
GRCh38 - Human Genome Assembly GRCh38 |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 134,760,206 - 134,760,348 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 134,760,208 - 134,760,348 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 133,894,236 - 133,894,378 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | X | q26.3 | NCBI | | | | | CHM1_1 | X | 133,805,848 - 133,805,990 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 133,085,323 - 133,085,465 (-) | NCBI | | T2T-CHM13v2.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
RNU4-44P (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 134,760,206 - 134,760,348 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 134,760,208 - 134,760,348 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 133,894,236 - 133,894,378 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | X | q26.3 | NCBI | | | | | CHM1_1 | X | 133,805,848 - 133,805,990 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 133,085,323 - 133,085,465 (-) | NCBI | | T2T-CHM13v2.0 | | |
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LOC119864041 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Dog10K_Boxer_Tasha | 17 | 28,810,851 - 28,810,991 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 29,646,793 - 29,646,933 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 29,646,793 - 29,646,933 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 28,868,378 - 28,868,518 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 28,936,310 - 28,936,450 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 29,155,417 - 29,155,557 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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miRNA Target Status
Predicted Target Of
Count of predictions: | 39 | Count of miRNA genes: | 37 | Interacting mature miRNAs: | 37 | Transcripts: | ENST00000363050 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction | |
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
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alimentary part of gastrointestinal system |
circulatory system |
endocrine system |
exocrine system |
hemolymphoid system |
hepatobiliary system |
integumental system |
musculoskeletal system |
nervous system |
renal system |
reproductive system |
respiratory system |
sensory system |
visual system |
adipose tissue |
appendage |
entire extraembryonic component |
pharyngeal arch |
High |
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Medium |
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Low |
7
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5
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4
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2
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8
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1
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5
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3
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18
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2
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8
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6
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4
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1
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1
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2
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1
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Below cutoff |
13
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11
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12
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3
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29
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6
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15
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14
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33
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7
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23
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7
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3
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6
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3
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Sequence
RefSeq Acc Id: |
ENST00000363050 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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GRCh38.p14 Ensembl | X | 134,760,208 - 134,760,348 (-) | Ensembl |
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Additional Information
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