MED28P2 (mediator complex subunit 28 pseudogene 2) - Rat Genome Database

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Gene: MED28P2 (mediator complex subunit 28 pseudogene 2) Homo sapiens
Analyze
Symbol: MED28P2
Name: mediator complex subunit 28 pseudogene 2
RGD ID: 10399087
HGNC Page HGNC:45079
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: MED28  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383149,099,499 - 149,099,815 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3149,099,499 - 149,099,815 (-)EnsemblGRCh38hg38GRCh38
GRCh373148,817,286 - 148,817,602 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map3q24NCBI
CHM1_13148,780,718 - 148,781,034 (-)NCBICHM1_1
T2T-CHM13v2.03151,850,234 - 151,850,550 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:54
Interacting mature miRNAs:54
Transcripts:ENST00000475771
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 1 2 1 3 4 1 2
Below cutoff 17 29 22 6 38 6 59 16 67 13 56 28 10 41

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000475771
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3149,099,499 - 149,099,815 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MED28P2 COSMIC
Ensembl Genes ENSG00000240511 Ensembl, ENTREZGENE
GTEx ENSG00000240511 GTEx
HGNC ID HGNC:45079 ENTREZGENE
Human Proteome Map MED28P2 Human Proteome Map
NCBI Gene MED28P2 ENTREZGENE