Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

8 Annotations Found.

An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
    		•  
  • The annotation was made from Ryang YM, etal., BMC Neurosci. 2011 Nov 14;12:113. doi: 10.1186/1471-2202-12-113.
  • 2 additional annotations were made from Ryang YM, etal., BMC Neurosci. 2011 Nov 14;12:113. doi: 10.1186/1471-2202-12-113.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Qualifier: treatment


    • An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Ju F, etal., Front Cell Neurosci. 2018 Aug 3;12:236. doi: 10.3389/fncel.2018.00236. eCollection 2018.
  • The annotation has been inferred from sequence orthology with Itgam (Mus musculus) [(IEP) inferred from expression pattern]
  • 5 additional annotations were made from Ju F, etal., Front Cell Neurosci. 2018 Aug 3;12:236. doi: 10.3389/fncel.2018.00236. eCollection 2018.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Curation Notes: mRNA:increased expression:cerebral cortex (mouse)


    • An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
    		•  
  • The annotation was made from Tian X, etal., PLoS One. 2013 Jul 2;8(7):e69252. doi: 10.1371/journal.pone.0069252. Print 2013.
  • 2 additional annotations were made from Tian X, etal., PLoS One. 2013 Jul 2;8(7):e69252. doi: 10.1371/journal.pone.0069252. Print 2013.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Qualifier: treatment


    • An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
    		•  
  • The annotation was made from Dos-Anjos S, etal., Brain Res. 2009 Sep 1;1287:20-7. doi: 10.1016/j.brainres.2009.06.065. Epub 2009 Jun 27.
  • 2 additional annotations were made from Dos-Anjos S, etal., Brain Res. 2009 Sep 1;1287:20-7. doi: 10.1016/j.brainres.2009.06.065. Epub 2009 Jun 27.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Curation Notes: mRNA:increased expression:brain (rat)


    • An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from expression pattern (IEP)
    		•  
  • The annotation was made from Scheld M, etal., J Steroid Biochem Mol Biol. 2020 Sep;202:105667. doi: 10.1016/j.jsbmb.2020.105667. Epub 2020 May 11.
  • 3 additional annotations were made from Scheld M, etal., J Steroid Biochem Mol Biol. 2020 Sep;202:105667. doi: 10.1016/j.jsbmb.2020.105667. Epub 2020 May 11.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Qualifier: treatment


    • An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from Zhang ZG, etal., Brain Res. 1995 Nov 6;698(1-2):79-85. doi: 10.1016/0006-8993(95)00830-j.
  • 2 additional annotations were made from Zhang ZG, etal., Brain Res. 1995 Nov 6;698(1-2):79-85. doi: 10.1016/0006-8993(95)00830-j.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Qualifier: treatment


    • An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from Chopp M, etal., J Cereb Blood Flow Metab. 1996 Jul;16(4):578-84. doi: 10.1097/00004647-199607000-00007.
  • 2 additional annotations were made from Chopp M, etal., J Cereb Blood Flow Metab. 1996 Jul;16(4):578-84. doi: 10.1097/00004647-199607000-00007.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Qualifier: treatment


    • An association has been curated linking Itgam and transient cerebral ischemia in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from Chopp M, etal., Stroke. 1994 Apr;25(4):869-75; discussion 875-6. doi: 10.1161/01.str.25.4.869.
  • 2 additional annotations were made from Chopp M, etal., Stroke. 1994 Apr;25(4):869-75; discussion 875-6. doi: 10.1161/01.str.25.4.869.
  • 241 RGD objects have been annotated to transient cerebral ischemia  (DOID:224)
  • 83 papers in RGD have been used to annotate Itgam
  • Qualifier: treatment


    • Go Back to source page   Continue to Ontology report