Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

8 Annotations Found.

An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Smith KE, etal., Mol Pharmacol 1992 Oct;42(4):563-9.
  • 2 additional annotations were made from Smith KE, etal., Mol Pharmacol 1992 Oct;42(4):563-9.
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6


    • An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with SLC6A6 (Homo sapiens)
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6
  • Qualifier: enables
  • Curation Notes: (PMID:31345061), (PMID:31903486), (PMID:8010975), (PMID:8382624), (PMID:8654117)
  • Original References(s): PMID:31345061 PMID:31903486 PMID:8010975 PMID:8382624 PMID:8654117


    • An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Tomi M, etal., Biochim Biophys Acta. 2008 Oct;1778(10):2138-42. doi: 10.1016/j.bbamem.2008.04.012. Epub 2008 May 3.
  • 5 additional annotations were made from Tomi M, etal., Biochim Biophys Acta. 2008 Oct;1778(10):2138-42. doi: 10.1016/j.bbamem.2008.04.012. Epub 2008 May 3.
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6
  • Qualifier: enables
  • Curation Notes: PMID:18501699


    • An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Zhou Y, etal., J Biol Chem. 2012 Oct 12;287(42):35733-35746. doi: 10.1074/jbc.M112.368175. Epub 2012 Aug 15.
  • 2 additional annotations were made from Zhou Y, etal., J Biol Chem. 2012 Oct 12;287(42):35733-35746. doi: 10.1074/jbc.M112.368175. Epub 2012 Aug 15.
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6
  • Qualifier: enables
  • Curation Notes: PMID:22896705


    • An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with SLC6A6 (Canis lupus familiaris)
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6
  • Qualifier: enables
  • Curation Notes: (PMID:1518851)
  • Original References(s): PMID:1518851


    • An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Slc6a6 (Mus musculus)
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6
  • Qualifier: enables
  • Curation Notes: (MGI:1099585|PMID:9375654), (MGI:51988|PMID:1465453), (MGI:7275316|PMID:30270321)
  • Original References(s): MGI:1099585 MGI:51988 MGI:7275316 PMID:1465453 PMID:30270321 PMID:9375654


    • An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with ARBA:ARBA00034165
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6
  • Qualifier: enables
  • Curation Notes: GO_REF:0000117
  • Original References(s): GO_REF:0000117


    • An association has been curated linking Slc6a6 and taurine:sodium symporter activity in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with MGI:98488 & PANTHER:PTN002614573 & Slc6a6 (Rattus norvegicus) & UniProtKB:P31641 & UniProtKB:Q00589 & UniProtKB:Q9MZ34 & ZFIN:ZDB-GENE-030131-3077
  • 3 RGD objects have been annotated to taurine:sodium symporter activity  (GO:0005369)
  • 17 papers in RGD have been used to annotate Slc6a6
  • Qualifier: enables
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


    • Go Back to source page   Continue to Ontology report