Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal periorbital region morphology
go back to main search page
Accession:MP:0030038 term browser browse the term
Definition:any structural anomaly of the region around the eye socket
Synonyms:exact_synonym: abnormal periorbital area morphology;   abnormal periorbital region
 narrow_synonym: periorbital region malformation


show annotations for term's descendants           Sort by:
abnormal periorbital region morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac1 histone deacetylase 1 IAGP MGI PMID:23792463 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 IAGP MGI PMID:10499586 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
abnormal periorbital skin morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:14975722 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Tfap2a transcription factor AP-2, alpha IAGP MGI PMID:14975722 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
eyelid edema term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:24840056 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Klf5 Kruppel-like transcription factor 5 IAGP MGI PMID:21600198 NCBI chr14:99,536,127...99,550,848
Ensembl chr14:99,536,127...99,552,472 		JBrowse link
G Neu1 neuraminidase 1 IAGP MGI PMID:12023988 NCBI chr17:35,150,229...35,156,273
Ensembl chr17:35,150,229...35,154,929 		JBrowse link
G Nfkbiz nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta IAGP MGI PMID:15491998 PMID:23453632 NCBI chr16:55,631,740...55,659,018
Ensembl chr16:55,631,738...55,659,262 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein IAGP MGI PMID:11809813 NCBI chr 4:55,350,042...55,392,237
Ensembl chr 4:55,350,043...55,392,237 		JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 IAGP MGI PMID:31562240 NCBI chr 4:3,995,942...4,019,663
Ensembl chr 4:3,995,936...4,019,663 		JBrowse link
G Sdr16c6 short chain dehydrogenase/reductase family 16C, member 6 IAGP MGI PMID:31562240 NCBI chr 4:4,055,926...4,077,514
Ensembl chr 4:4,055,929...4,077,522 		JBrowse link
G Tnf tumor necrosis factor IAGP MGI PMID:23453632 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
periorbital edema term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 IAGP MGI PMID:12719382 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 IAGP MGI PMID:9768749 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169 		JBrowse link
G Ptpn14 protein tyrosine phosphatase, non-receptor type 14 IAGP MGI PMID:20826270 NCBI chr 1:189,460,417...189,608,892
Ensembl chr 1:189,460,465...189,608,892 		JBrowse link
G Trp73 transformation related protein 73 IAGP MGI PMID:10716451 NCBI chr 4:154,140,706...154,224,332
Ensembl chr 4:154,140,706...154,224,665 		JBrowse link
periorbital fullness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2ird1 general transcription factor II I repeat domain-containing 1 IAGP MGI PMID:16293761 PMID:22652393 NCBI chr 5:134,386,515...134,485,628
Ensembl chr 5:134,386,510...134,485,570 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16762
    growth/size/body region phenotype 6951
      abnormal head morphology 1332
        abnormal facial morphology 1086
          abnormal periorbital region morphology 17
            abnormal periorbital skin morphology 2
            periorbital edema + 12
            periorbital fullness 1
paths to the root