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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal pharyngeal arch mesenchyme morphology
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Accession:MP:0011262 term browser browse the term
Definition:any structural anomaly in the primordial embryonic connective tissue associated with the branchial arches, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to facial and cranial nerve-associated structures
Synonyms:exact_synonym: abnormal branchial arch mesenchyme morphology


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abnormal pharyngeal arch mesenchyme morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 IAGP MGI PMID:16720880 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:18058916 PMID:24700590 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 IAGP MGI PMID:18058916 NCBI chr  X:52,076,955...52,110,537
Ensembl chr  X:52,077,014...52,110,536 		JBrowse link
G Mau2 MAU2 sister chromatid cohesion factor IAGP MGI PMID:24700590 NCBI chr 8:70,465,896...70,495,384
Ensembl chr 8:70,468,773...70,495,384 		JBrowse link
G Nipbl NIPBL cohesin loading factor IAGP MGI PMID:24700590 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:16720880 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain IAGP MGI PMID:15750184 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Rspo2 R-spondin 2 IAGP MGI PMID:21237142 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 IAGP MGI PMID:20596238 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 IAGP MGI PMID:20596238 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16883
    embryo phenotype 2427
      abnormal embryo morphology 1851
        abnormal embryonic tissue morphology 1266
          abnormal pharyngeal arch morphology 217
            abnormal pharyngeal arch mesenchyme morphology 10
Path 2
Term Annotations click to browse term
  mammalian phenotype 16883
    embryo phenotype 2427
      abnormal embryo morphology 1851
        abnormal embryonic tissue morphology 1266
          abnormal mesenchyme morphology 108
            abnormal head mesenchyme morphology 56
              abnormal pharyngeal arch mesenchyme morphology 10
paths to the root