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ONTOLOGY REPORT - ANNOTATIONS

Term:ganglioside biosynthetic process
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Accession:GO:0001574 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues.
Synonyms:exact_synonym: ganglioside anabolism;   ganglioside biosynthesis;   ganglioside formation;   ganglioside synthesis

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ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 beta-1,3-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,587,328...25,589,081
Ensembl chrNW_004936476:25,587,592...25,588,763 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10021458) Ensembl
MGI
TreeGrafter		 PMID:10021458 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936646:1,770,412...1,777,152
Ensembl chrNW_004936646:1,770,930...1,777,173 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936571:3,064,150...3,572,992
Ensembl chrNW_004936571:3,064,179...3,574,202 		JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:15,541,994...15,551,245
Ensembl chrNW_004936487:15,541,735...15,551,305 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936571:3,815,867...3,971,219
Ensembl chrNW_004936571:3,815,823...3,973,328 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10702226) Ensembl
MGI
TreeGrafter		 PMID:10702226 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:15,522,286...15,534,934
Ensembl chrNW_004936487:15,522,266...15,539,947 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:10,278,843...10,343,177
Ensembl chrNW_004936483:10,278,838...10,313,905 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:6,955,973...6,962,952
Ensembl chrNW_004936497:6,955,857...6,963,117 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936523:3,270,776...3,363,114
Ensembl chrNW_004936523:3,270,718...3,365,668 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:9,869,166...9,990,205
Ensembl chrNW_004936520:9,869,195...9,988,541 		JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:4,719,198...4,736,638
Ensembl chrNW_004936514:4,719,052...4,736,635 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,535,617...1,590,723
Ensembl chrNW_004936682:1,535,586...1,593,827 		JBrowse link
G LOC101961066 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936561:5,271,963...5,279,570 JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936470:15,860,669...15,934,500
Ensembl chrNW_004936470:15,918,749...15,934,503 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936475:23,149,452...23,203,919
Ensembl chrNW_004936475:23,149,487...23,205,027 		JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:25,058,892...25,248,378
Ensembl chrNW_004936474:25,058,892...25,248,378 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15975
    metabolic process 9644
      amide metabolic process 414
        ceramide metabolic process 103
          ganglioside metabolic process 27
            ganglioside biosynthetic process 16
              ganglioside biosynthetic process via lactosylceramide 6
Path 2
Term Annotations click to browse term
  biological_process 15975
    metabolic process 9644
      primary metabolic process 8435
        lipid metabolic process 1282
          cellular lipid metabolic process 962
            membrane lipid metabolic process 197
              sphingolipid metabolic process 147
                ceramide metabolic process 103
                  ganglioside metabolic process 27
                    ganglioside biosynthetic process 16
                      ganglioside biosynthetic process via lactosylceramide 6
paths to the root