tick-borne encephalitis - Ontology Report

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:	tick-borne encephalitis	go back to main search page
Accession:	DOID:0050175	browse the term
Definition:	A viral infectious disease that results_in inflammation located_in brain, has_material_basis_in Tick-borne encephalitis virus, which is transmitted_by Ixodes ticks. The infection has_symptom drowsiness, has_symptom confusion, has_symptom sensory disturbances, and has_symptom paralysis. (DO)
Synonyms:	exact_synonym:	Central European Encephalitis; European Tick Borne Encephalitis; European Tick-Borne Encephalitides; Far Eastern Russian Encephalitis; Far Eastern TBE; Louping Ill Encephalitides; Louping Ill Encephalitis; Russian Spring Summer Encephalitis; Siberian tick-borne encephalitis; Tick-Borne Encephalitides; Western European tick-borne encephalitis; taiga encephalitis; west-Siberian encephalitis
	primary_id:	MESH:D004675
	xref:	EFO:1001309; GARD:5216; ICD10CM:A84.1; ICD9CM:063.2

show annotations for term's descendants Sort by:
Rat (2) Mouse (2) Human (2) Chinchilla (2) Bonobo (2) Dog (2) Squirrel (2) Pig (2) Green Monkey (2) Naked Mole-rat (2) All
Genes (2)

tick-borne encephalitis

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cd40

CD40 molecule

ISO

protein:increased expression:cerebrospinal fluid (human)

RGD

PMID:16463218

RGD:11352252

NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534

Cd40lg

CD40 ligand

ISO

protein:increased expression:cerebrospinal fluid (human)

RGD

PMID:16463218

RGD:11352252

NCBI chr X:135,127,052...135,138,768
Ensembl chr X:135,126,969...135,138,306

Term paths to the root

Path 1
Term	Annotations
disease	18969
disease by infectious agent	2215
viral infectious disease	1677
Arbovirus Infections	57
Arbovirus Encephalitis	15
tick-borne encephalitis	2
Powassan encephalitis	0
Path 2
Term	Annotations
disease	18969
disease of anatomical entity	18249
nervous system disease	14090
central nervous system disease	12430
brain disease	11668
encephalitis	109
Infectious Encephalitis	87
viral encephalitis	87
Arbovirus Encephalitis	15
tick-borne encephalitis	2
Powassan encephalitis	0

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Create Name:

Description:

Send us a Message

RGD DISEASE ONTOLOGY - ANNOTATIONS