Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphocholine
go back to main search page
Accession:CHEBI:73002 term browser browse the term
Definition:A phosphatidylcholine 34:2 in which the 1- and 2-acyl groups are specified as hexadecanoyl (palmitoyl) and 9Z,12Z-octadecadienoyl (linoleoyl) respectively.
Synonyms:exact_synonym: (2R)-3-(hexadecanoyloxy)-2-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propyl 2-(trimethylammonio)ethyl phosphate;   (2R)-3-(hexadecanoyloxy)-2-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propyl 2-(trimethylazaniumyl)ethyl phosphate
 related_synonym: 1-Palmitoyl-2-linoleoyl-sn-glycerophosphatidylcholine;   1-Palmitoyl-2-linoleoylphosphatidylcholine;   1-palmitoyl-2-linoleoyl-GPC;   1-palmitoyl-2-linoleoyl-GPC (16:0/18:2);   1-palmitoyl-2-linoleoyl-sn-glycero-3-phosphocholine;   1-palmitoyl-2-linoleoyl-sn-glycero-phosphatidylcholine;   Formula=C42H80NO8P;   GPC(16:0/18:2);   GPCho 16:0/18:2(9Z,12Z);   GPCho(16:0/18:2);   GPCho(16:0/18:2omega6);   InChI=1S/C42H80NO8P/c1-6-8-10-12-14-16-18-20-21-23-25-27-29-31-33-35-42(45)51-40(39-50-52(46,47)49-37-36-43(3,4)5)38-48-41(44)34-32-30-28-26-24-22-19-17-15-13-11-9-7-2/h14,16,20-21,40H,6-13,15,17-19,22-39H2,1-5H3/b16-14-,21-20-/t40-/m1/s1;   InChIKey=JLPULHDHAOZNQI-ZTIMHPMXSA-N;   Lecithin;   PC 16:0/18:2(9Z,12Z);   PC(16:0/18:2);   PC(16:0/18:2omega6);   PC(34:2);   Phosphatidylcholine(16:0/18:2);   Phosphatidylcholine(16:0/18:2omega6);   SMILES=C(C[N+](C)(C)C)OP(=O)([O-])OC[C@H](OC(CCCCCCC/C=C\\C/C=C\\CCCCC)=O)COC(=O)CCCCCCCCCCCCCCC;   phosphatidylcholine 16:0/18:2(9Z,12Z)
 alt_id: CHEBI:41570;   CHEBI:73798
 xref: CAS:6931-84-6;   HMDB:HMDB0007973;   LIPID_MAPS_instance:LMGP01010594
 xref_mesh: MESH:C055402
 xref: PDBeChem:CPL;   PMID:11779181;   Reaxys:5209585


show annotations for term's descendants           Sort by:
1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphocholine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase affects abundance ISO FECH protein affects the abundance of 1-palmitoyl-2-linoleoylphosphatidylcholine CTD PMID:29906468 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19844
    role 19820
      biological role 19818
        biochemical role 19525
          metabolite 19512
            phosphatidylcholine 34:2 1
              1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphocholine 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19844
    subatomic particle 19842
      composite particle 19842
        hadron 19842
          baryon 19842
            nucleon 19809
              atomic nucleus 19842
                atom 19842
                  main group element atom 19792
                    p-block element atom 19792
                      chalcogen 19548
                        oxygen atom 19491
                          oxygen molecular entity 19523
                            hydroxides 19331
                              oxoacid 18762
                                pnictogen oxoacid 14895
                                  phosphorus oxoacid 14485
                                    phosphoric acids 11416
                                      phosphoric acid 13924
                                        phosphoric acid derivative 13830
                                          phosphate 13829
                                            organic phosphate 13829
                                              phospholipid 316
                                                glycerophospholipid 211
                                                  glycerophosphocholine 124
                                                    phosphatidylcholine 82
                                                      1,2-diacyl-sn-glycero-3-phosphocholine 23
                                                        1-acyl-2-linoleoyl-sn-glycero-3-phosphocholine betaine 1
                                                          1-hexadecanoyl-2-(9Z,12Z-octadecadienoyl)-sn-glycero-3-phosphocholine 1
paths to the root