Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:beta-pinene
go back to main search page
Accession:CHEBI:50025 term browser browse the term
Definition:An isomer of pinene with an exocyclic double bond. It is a component of essential oils from many plants.
Synonyms:exact_synonym: pin-2(10)-ene
 related_synonym: 2(10)-pinene;   6,6-Dimethyl-2-methylidenebicyclo[3.1.1]heptane;   6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane;   Formula=C10H16;   InChI=1S/C10H16/c1-7-4-5-8-6-9(7)10(8,2)3/h8-9H,1,4-6H2,2-3H3;   InChIKey=WTARULDDTDQWMU-UHFFFAOYSA-N;   SMILES=CC1(C)C2CCC(=C)C1C2;   nopinene;   pseudopinene
 alt_id: CHEBI:10438;   CHEBI:22853
 xref: CAS:127-91-3;   HMDB:HMDB0036560;   KEGG:C09882;   KNApSAcK:C00000816;   LIPID_MAPS_instance:LMPR0102120018
 xref_mesh: MESH:C010789
 xref: MetaCyc:CPD-3221;   PMID:23472478;   PMID:23513734;   PMID:23738469;   PMID:24555296;   Reaxys:1362266;   Wikipedia:Beta-pinene


show annotations for term's descendants           Sort by:
beta-pinene term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A multiple interactions ISO beta-pinene inhibits the reaction [ABCB1 protein results in increased uptake of Digoxin] CTD PMID:16904803 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Ahr aryl hydrocarbon receptor multiple interactions ISO [4-cymene co-treated with beta-pinene co-treated with gamma-terpinene co-treated with cuminol] results in increased activity of AHR protein CTD PMID:29191726 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Vip vasoactive intestinal peptide increases expression EXP beta-pinene results in increased expression of VIP protein CTD PMID:20934418 NCBI chr 1:42,064,878...42,073,219
Ensembl chr 1:42,065,120...42,073,216 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19808
    role 19784
      biological role 19782
        biochemical role 19496
          metabolite 19484
            eukaryotic metabolite 19307
              plant metabolite 17943
                beta-pinene 3
                  (+)-beta-pinene 0
                  (-)-beta-pinene 0
                  pinen-10-yl vicianoside 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19808
    subatomic particle 19806
      composite particle 19806
        hadron 19806
          baryon 19806
            nucleon 19806
              atomic nucleus 19806
                atom 19806
                  main group element atom 19756
                    main group molecular entity 19756
                      s-block molecular entity 19595
                        hydrogen molecular entity 19582
                          hydrides 19095
                            organic hydride 18669
                              organic fundamental parent 18669
                                hydrocarbon 18415
                                  terpene 14057
                                    monoterpene 3819
                                      pinane 1817
                                        pinene 1817
                                          beta-pinene 3
                                            (+)-beta-pinene 0
                                            (-)-beta-pinene 0
                                            pinen-10-yl vicianoside 0
paths to the root