Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 48,239 (bp)   Positions: 67
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SBH/Ygl (MCW) 
.0
.0
.013
.015
.007
.122
.02
.001
.001
.001
.014
.725
.002
.0
.002
.002
.0
.0
.192
.17
.005
.012
.0
.0
.998
.001
.0
.133
.003
.016
.213
.054
.006
--
.225
.003
.093
--
--
--
--
.087
.076
.694
.458
.018
.024
.086
.009
.231
.244
.242
.24
.03
.006
.002
.025
.001
.008
.0
.425
.798
.111
.028
.021
.04
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Src
Src
Src
Src
Src
Src
Src
T
C
A
C
A
C
T
C
T
G
T
T
A
G
C
A
6
2
A
G
A
T
A
T
T
A
A
G
A
C
T
C
A
A
C
A
A
C
C
2
A
G
C
2
C
T
C
C
G
2
A
2
G
C
2
A
G
A
8
C
A
T
T
C
A
G
A
  158,124,611
  158,125,852
  158,126,181
  158,126,261
  158,127,366
  158,127,694
  158,127,802
  158,127,846
  158,128,929
  158,129,031
  158,129,373
  158,130,330
  158,130,413
  158,131,299
  158,131,605
  158,131,645
  158,131,661
  158,131,665
  158,131,765
  158,133,424
  158,134,284
  158,136,014
  158,136,130
  158,136,131
  158,138,450
  158,138,524
  158,140,904
  158,142,419
  158,143,813
  158,145,692
  158,145,755
  158,147,762
  158,148,208
  158,148,399
  158,149,924
  158,150,037
  158,151,035
  158,153,017
  158,153,051
  158,153,199
  158,153,252
  158,153,698
  158,154,689
  158,155,027
  158,155,076
  158,155,265
  158,156,165
  158,158,357
  158,160,561
  158,162,210
  158,162,239
  158,162,242
  158,162,245
  158,162,864
  158,163,215
  158,163,216
  158,165,105
  158,167,277
  158,167,976
  158,168,585
  158,169,489
  158,169,721
  158,170,430
  158,170,728
  158,171,106
  158,171,742
  158,171,781
C
T
-
A
G
T
C
T
C
T
C
C
C
A
G
G
-
-
G
-
A/G
C
C
C
C
G
G
A
G
C/G
C
-/3
G
G
T
G
C
G
C/T
2/-
3
A
-
2/-
T
A
A
T
T
2/-
G/3
2/-
A
T
-
-
A
G
-
A
C
C
C
T
G
3
2